EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000007410 (Gene tree)
Gene ID: 101065645
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 6947 bases
Position: chr3:12755191-12762137
Accession: 101065645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000018309	zf-C2H2	PF00096.26	2.9e-29	1	6
ENSTRUP00000018309	zf-C2H2	PF00096.26	2.9e-29	2	6
ENSTRUP00000018309	zf-C2H2	PF00096.26	2.9e-29	3	6
ENSTRUP00000018309	zf-C2H2	PF00096.26	2.9e-29	4	6
ENSTRUP00000018309	zf-C2H2	PF00096.26	2.9e-29	5	6
ENSTRUP00000018309	zf-C2H2	PF00096.26	2.9e-29	6	6
ENSTRUP00000018309	zf-met	PF12874.7	2.4e-13	1	2
ENSTRUP00000018309	zf-met	PF12874.7	2.4e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000018385	-	4952	XM_011602803	ENSTRUP00000018309	1078 (aa)	XP_011601105	H2T0X1

Gene Model

Click here to download ENSTRUG00000007410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000007410's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000007410	sall4	50	46.000	ENSTRUG00000013906	-	98	46.000
ENSTRUG00000007410	sall4	59	51.020	ENSTRUG00000015687	-	94	51.020
ENSTRUG00000007410	sall4	80	76.250	ENSTRUG00000008950	sall1a	95	76.250
ENSTRUG00000007410	sall4	56	53.061	ENSTRUG00000005321	-	94	53.061
ENSTRUG00000007410	sall4	66	52.083	ENSTRUG00000017456	znf236	67	52.083
ENSTRUG00000007410	sall4	56	51.923	ENSTRUG00000017423	sall3a	94	53.191

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000007410	sall4	100	45.367	ENSG00000101115	SALL4	100	52.419	Homo_sapiens
ENSTRUG00000007410	sall4	100	77.993	ENSAPOG00000002465	sall4	100	78.085	Acanthochromis_polyacanthus
ENSTRUG00000007410	sall4	100	44.540	ENSAMEG00000013250	-	100	44.750	Ailuropoda_melanoleuca
ENSTRUG00000007410	sall4	100	75.390	ENSACIG00000017298	sall4	100	75.390	Amphilophus_citrinellus
ENSTRUG00000007410	sall4	100	79.006	ENSAOCG00000023678	sall4	100	79.098	Amphiprion_ocellaris
ENSTRUG00000007410	sall4	100	79.190	ENSAPEG00000000751	sall4	100	79.282	Amphiprion_percula
ENSTRUG00000007410	sall4	100	78.827	ENSATEG00000024480	sall4	100	78.827	Anabas_testudineus
ENSTRUG00000007410	sall4	99	51.327	ENSAPLG00000006498	SALL4	99	52.120	Anas_platyrhynchos
ENSTRUG00000007410	sall4	100	51.266	ENSACAG00000012748	SALL4	100	51.703	Anolis_carolinensis
ENSTRUG00000007410	sall4	100	45.694	ENSANAG00000023352	SALL4	81	67.308	Aotus_nancymaae
ENSTRUG00000007410	sall4	100	75.919	ENSACLG00000017851	sall4	100	75.919	Astatotilapia_calliptera
ENSTRUG00000007410	sall4	99	65.171	ENSAMXG00000001254	sall4	99	65.412	Astyanax_mexicanus
ENSTRUG00000007410	sall4	100	43.231	ENSBTAG00000003101	SALL4	100	43.206	Bos_taurus
ENSTRUG00000007410	sall4	80	47.374	ENSCJAG00000000591	SALL4	97	47.144	Callithrix_jacchus
ENSTRUG00000007410	sall4	100	45.296	ENSCAFG00000011738	-	100	45.622	Canis_familiaris
ENSTRUG00000007410	sall4	100	45.209	ENSCAFG00020021870	SALL4	100	45.534	Canis_lupus_dingo
ENSTRUG00000007410	sall4	100	43.267	ENSCHIG00000026270	SALL4	100	43.652	Capra_hircus
ENSTRUG00000007410	sall4	100	43.478	ENSTSYG00000007359	SALL4	100	53.306	Carlito_syrichta
ENSTRUG00000007410	sall4	98	44.322	ENSCAPG00000012135	SALL4	96	44.840	Cavia_aperea
ENSTRUG00000007410	sall4	100	41.989	ENSCCAG00000029512	-	100	60.784	Cebus_capucinus
ENSTRUG00000007410	sall4	100	45.447	ENSCATG00000030757	SALL4	82	67.308	Cercocebus_atys
ENSTRUG00000007410	sall4	100	43.849	ENSCLAG00000010479	SALL4	82	65.385	Chinchilla_lanigera
ENSTRUG00000007410	sall4	100	45.280	ENSCSAG00000015269	SALL4	100	45.629	Chlorocebus_sabaeus
ENSTRUG00000007410	sall4	99	51.687	ENSCPBG00000014995	SALL4	99	52.030	Chrysemys_picta_bellii
ENSTRUG00000007410	sall4	100	45.105	ENSCANG00000036463	SALL4	100	45.455	Colobus_angolensis_palliatus
ENSTRUG00000007410	sall4	62	55.838	ENSCGRG00001019569	Sall4	100	53.211	Cricetulus_griseus_chok1gshd
ENSTRUG00000007410	sall4	62	55.838	ENSCGRG00000000462	Sall4	100	77.778	Cricetulus_griseus_crigri
ENSTRUG00000007410	sall4	100	76.755	ENSCSEG00000014604	sall4	100	76.867	Cynoglossus_semilaevis
ENSTRUG00000007410	sall4	100	75.344	ENSCVAG00000010815	sall4	100	75.710	Cyprinodon_variegatus
ENSTRUG00000007410	sall4	99	64.589	ENSDARG00000044485	sall4	99	64.318	Danio_rerio
ENSTRUG00000007410	sall4	100	45.030	ENSDNOG00000040633	SALL4	100	44.589	Dasypus_novemcinctus
ENSTRUG00000007410	sall4	100	42.068	ENSDORG00000012841	Sall4	100	76.923	Dipodomys_ordii
ENSTRUG00000007410	sall4	74	65.385	ENSETEG00000012475	-	64	65.385	Echinops_telfairi
ENSTRUG00000007410	sall4	100	45.682	ENSECAG00000018533	SALL4	100	45.934	Equus_caballus
ENSTRUG00000007410	sall4	100	43.497	ENSEEUG00000003649	SALL4	99	42.794	Erinaceus_europaeus
ENSTRUG00000007410	sall4	100	65.778	ENSELUG00000005696	sall4	100	65.778	Esox_lucius
ENSTRUG00000007410	sall4	100	45.000	ENSFCAG00000002822	SALL4	100	44.952	Felis_catus
ENSTRUG00000007410	sall4	100	50.618	ENSFALG00000013149	SALL4	100	51.192	Ficedula_albicollis
ENSTRUG00000007410	sall4	100	44.269	ENSFDAG00000017812	SALL4	91	63.462	Fukomys_damarensis
ENSTRUG00000007410	sall4	100	74.084	ENSFHEG00000014187	sall4	100	74.084	Fundulus_heteroclitus
ENSTRUG00000007410	sall4	100	69.041	ENSGMOG00000003822	sall4	100	69.322	Gadus_morhua
ENSTRUG00000007410	sall4	100	52.081	ENSGALG00000041365	SALL4	100	52.790	Gallus_gallus
ENSTRUG00000007410	sall4	100	74.634	ENSGAFG00000019925	sall4	100	75.458	Gambusia_affinis
ENSTRUG00000007410	sall4	100	75.000	ENSGACG00000011124	sall4	100	75.000	Gasterosteus_aculeatus
ENSTRUG00000007410	sall4	99	51.816	ENSGAGG00000002297	SALL4	99	52.259	Gopherus_agassizii
ENSTRUG00000007410	sall4	100	45.423	ENSGGOG00000001832	SALL4	81	67.308	Gorilla_gorilla
ENSTRUG00000007410	sall4	100	76.011	ENSHBUG00000007327	sall4	100	76.011	Haplochromis_burtoni
ENSTRUG00000007410	sall4	98	44.211	ENSHGLG00000009043	SALL4	96	44.203	Heterocephalus_glaber_female
ENSTRUG00000007410	sall4	98	44.211	ENSHGLG00100002722	SALL4	96	44.354	Heterocephalus_glaber_male
ENSTRUG00000007410	sall4	100	74.404	ENSHCOG00000008519	sall4	100	74.128	Hippocampus_comes
ENSTRUG00000007410	sall4	99	63.975	ENSIPUG00000019170	sall4	99	64.247	Ictalurus_punctatus
ENSTRUG00000007410	sall4	67	50.820	ENSSTOG00000025002	SALL4	100	83.099	Ictidomys_tridecemlineatus
ENSTRUG00000007410	sall4	100	44.377	ENSJJAG00000020688	Sall4	99	84.507	Jaculus_jaculus
ENSTRUG00000007410	sall4	100	76.422	ENSKMAG00000002501	sall4	100	77.156	Kryptolebias_marmoratus
ENSTRUG00000007410	sall4	100	78.846	ENSLBEG00000019951	sall4	100	78.846	Labrus_bergylta
ENSTRUG00000007410	sall4	96	47.535	ENSLACG00000013898	SALL4	99	57.672	Latimeria_chalumnae
ENSTRUG00000007410	sall4	100	62.116	ENSLOCG00000002427	sall4	100	62.116	Lepisosteus_oculatus
ENSTRUG00000007410	sall4	100	45.048	ENSLAFG00000004309	SALL4	100	44.825	Loxodonta_africana
ENSTRUG00000007410	sall4	100	45.288	ENSMFAG00000027169	SALL4	100	45.637	Macaca_fascicularis
ENSTRUG00000007410	sall4	88	46.817	ENSMMUG00000003870	SALL4	100	52.479	Macaca_mulatta
ENSTRUG00000007410	sall4	88	46.715	ENSMNEG00000035995	SALL4	82	67.308	Macaca_nemestrina
ENSTRUG00000007410	sall4	100	45.367	ENSMLEG00000030467	SALL4	100	45.717	Mandrillus_leucophaeus
ENSTRUG00000007410	sall4	100	78.474	ENSMAMG00000005223	sall4	100	78.747	Mastacembelus_armatus
ENSTRUG00000007410	sall4	100	75.919	ENSMZEG00005023418	sall4	100	75.919	Maylandia_zebra
ENSTRUG00000007410	sall4	75	63.462	ENSMGAG00000009344	SALL4	100	63.462	Meleagris_gallopavo
ENSTRUG00000007410	sall4	100	42.636	ENSMAUG00000015814	Sall4	100	74.699	Mesocricetus_auratus
ENSTRUG00000007410	sall4	100	45.953	ENSMICG00000000027	SALL4	82	67.308	Microcebus_murinus
ENSTRUG00000007410	sall4	100	44.196	ENSMOCG00000018245	Sall4	99	83.333	Microtus_ochrogaster
ENSTRUG00000007410	sall4	100	83.257	ENSMMOG00000014929	sall4	100	83.625	Mola_mola
ENSTRUG00000007410	sall4	99	47.731	ENSMODG00000016387	SALL4	97	47.382	Monodelphis_domestica
ENSTRUG00000007410	sall4	100	80.311	ENSMALG00000018709	sall4	100	81.274	Monopterus_albus
ENSTRUG00000007410	sall4	100	43.348	MGP_CAROLIEiJ_G0024723	Sall4	100	84.722	Mus_caroli
ENSTRUG00000007410	sall4	100	43.328	ENSMUSG00000027547	Sall4	100	84.722	Mus_musculus
ENSTRUG00000007410	sall4	100	42.367	MGP_PahariEiJ_G0026164	Sall4	100	84.722	Mus_pahari
ENSTRUG00000007410	sall4	100	43.377	MGP_SPRETEiJ_G0025643	Sall4	100	84.722	Mus_spretus
ENSTRUG00000007410	sall4	100	44.204	ENSMPUG00000017543	SALL4	96	44.128	Mustela_putorius_furo
ENSTRUG00000007410	sall4	78	61.538	ENSMLUG00000008405	-	84	61.538	Myotis_lucifugus
ENSTRUG00000007410	sall4	99	35.560	ENSMLUG00000028073	-	99	35.050	Myotis_lucifugus
ENSTRUG00000007410	sall4	98	45.032	ENSMLUG00000007060	-	98	45.194	Myotis_lucifugus
ENSTRUG00000007410	sall4	100	43.260	ENSNGAG00000017833	Sall4	84	67.308	Nannospalax_galili
ENSTRUG00000007410	sall4	100	76.103	ENSNBRG00000001829	sall4	100	76.103	Neolamprologus_brichardi
ENSTRUG00000007410	sall4	100	45.048	ENSNLEG00000007013	SALL4	100	45.271	Nomascus_leucogenys
ENSTRUG00000007410	sall4	85	59.615	ENSMEUG00000005793	-	99	59.615	Notamacropus_eugenii
ENSTRUG00000007410	sall4	100	45.311	ENSOPRG00000011640	SALL4	100	44.991	Ochotona_princeps
ENSTRUG00000007410	sall4	100	76.676	ENSONIG00000016557	sall4	100	76.838	Oreochromis_niloticus
ENSTRUG00000007410	sall4	99	52.205	ENSOANG00000008667	SALL4	97	52.766	Ornithorhynchus_anatinus
ENSTRUG00000007410	sall4	97	46.154	ENSOCUG00000011797	SALL4	99	45.868	Oryctolagus_cuniculus
ENSTRUG00000007410	sall4	100	74.105	ENSORLG00000016130	sall4	100	74.839	Oryzias_latipes
ENSTRUG00000007410	sall4	100	74.288	ENSORLG00020007339	sall4	100	75.023	Oryzias_latipes_hni
ENSTRUG00000007410	sall4	100	73.921	ENSORLG00015002265	sall4	100	74.656	Oryzias_latipes_hsok
ENSTRUG00000007410	sall4	100	74.770	ENSOMEG00000017344	sall4	100	75.506	Oryzias_melastigma
ENSTRUG00000007410	sall4	97	46.247	ENSOGAG00000013799	SALL4	99	46.247	Otolemur_garnettii
ENSTRUG00000007410	sall4	100	41.725	ENSOARG00000014570	SALL4	100	41.762	Ovis_aries
ENSTRUG00000007410	sall4	100	45.383	ENSPPAG00000038064	SALL4	81	67.308	Pan_paniscus
ENSTRUG00000007410	sall4	100	44.649	ENSPPRG00000008677	SALL4	100	44.601	Panthera_pardus
ENSTRUG00000007410	sall4	100	45.423	ENSPTRG00000013631	SALL4	81	67.308	Pan_troglodytes
ENSTRUG00000007410	sall4	88	46.715	ENSPANG00000021792	SALL4	82	67.308	Papio_anubis
ENSTRUG00000007410	sall4	100	62.262	ENSPKIG00000007074	sall4	100	62.443	Paramormyrops_kingsleyae
ENSTRUG00000007410	sall4	99	51.579	ENSPSIG00000009066	SALL4	99	52.285	Pelodiscus_sinensis
ENSTRUG00000007410	sall4	100	67.528	ENSPMGG00000022551	sall4	100	67.528	Periophthalmus_magnuspinnatus
ENSTRUG00000007410	sall4	100	43.777	ENSPEMG00000022706	Sall4	100	84.722	Peromyscus_maniculatus_bairdii
ENSTRUG00000007410	sall4	99	48.644	ENSPCIG00000022838	SALL4	97	49.301	Phascolarctos_cinereus
ENSTRUG00000007410	sall4	100	75.275	ENSPFOG00000001442	sall4	100	75.275	Poecilia_formosa
ENSTRUG00000007410	sall4	100	75.183	ENSPLAG00000008760	sall4	100	75.183	Poecilia_latipinna
ENSTRUG00000007410	sall4	100	75.275	ENSPMEG00000008497	sall4	100	75.275	Poecilia_mexicana
ENSTRUG00000007410	sall4	100	74.634	ENSPREG00000021140	sall4	100	74.634	Poecilia_reticulata
ENSTRUG00000007410	sall4	100	45.622	ENSPPYG00000011138	SALL4	100	45.709	Pongo_abelii
ENSTRUG00000007410	sall4	100	42.870	ENSPCAG00000004726	SALL4	99	43.281	Procavia_capensis
ENSTRUG00000007410	sall4	100	45.209	ENSPCOG00000016321	SALL4	81	67.308	Propithecus_coquereli
ENSTRUG00000007410	sall4	94	44.486	ENSPVAG00000002075	SALL4	94	44.651	Pteropus_vampyrus
ENSTRUG00000007410	sall4	100	75.827	ENSPNYG00000021738	sall4	100	75.827	Pundamilia_nyererei
ENSTRUG00000007410	sall4	99	65.577	ENSPNAG00000020929	sall4	99	65.849	Pygocentrus_nattereri
ENSTRUG00000007410	sall4	100	43.798	ENSRNOG00000050035	Sall4	83	65.385	Rattus_norvegicus
ENSTRUG00000007410	sall4	100	45.280	ENSRBIG00000039876	SALL4	100	45.629	Rhinopithecus_bieti
ENSTRUG00000007410	sall4	100	45.280	ENSRROG00000036585	SALL4	100	45.629	Rhinopithecus_roxellana
ENSTRUG00000007410	sall4	100	45.815	ENSSBOG00000030011	SALL4	81	67.308	Saimiri_boliviensis_boliviensis
ENSTRUG00000007410	sall4	99	65.385	ENSSHAG00000018013	SALL4	91	65.385	Sarcophilus_harrisii
ENSTRUG00000007410	sall4	100	63.110	ENSSFOG00015021075	sall4	100	63.291	Scleropages_formosus
ENSTRUG00000007410	sall4	100	78.408	ENSSMAG00000019218	sall4	99	78.683	Scophthalmus_maximus
ENSTRUG00000007410	sall4	100	81.227	ENSSDUG00000004657	sall4	100	81.502	Seriola_dumerili
ENSTRUG00000007410	sall4	100	80.769	ENSSLDG00000004973	sall4	100	81.044	Seriola_lalandi_dorsalis
ENSTRUG00000007410	sall4	100	79.078	ENSSPAG00000001978	sall4	100	79.078	Stegastes_partitus
ENSTRUG00000007410	sall4	100	45.359	ENSSSCG00000007479	SALL4	100	45.359	Sus_scrofa
ENSTRUG00000007410	sall4	100	87.685	ENSTNIG00000012460	sall4	100	88.519	Tetraodon_nigroviridis
ENSTRUG00000007410	sall4	98	43.773	ENSTTRG00000007753	SALL4	99	43.538	Tursiops_truncatus
ENSTRUG00000007410	sall4	100	44.320	ENSUAMG00000010113	SALL4	100	44.531	Ursus_americanus
ENSTRUG00000007410	sall4	98	44.405	ENSUMAG00000024274	SALL4	99	44.713	Ursus_maritimus
ENSTRUG00000007410	sall4	100	49.426	ENSXETG00000012326	sall4	100	49.120	Xenopus_tropicalis
ENSTRUG00000007410	sall4	100	67.339	ENSXCOG00000015467	sall4	100	68.165	Xiphophorus_couchianus
ENSTRUG00000007410	sall4	100	67.854	ENSXMAG00000012692	sall4	100	67.945	Xiphophorus_maculatus