EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000007426 (Gene tree)
Gene ID: 101066184
Gene Symbol: -
Alias: wu:fc68f03|zgc:65870|zgc:77347
Full Name: poly(rC)-binding protein 4-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 13441 bases
Position: chr3:9427434-9440874
Accession: 101066184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000018355	KH_1	PF00013.29	2e-39	1	2
ENSTRUP00000018355	KH_1	PF00013.29	2e-39	2	2
ENSTRUP00000018355	KH_2	PF07650.17	9.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000018431	-	1290	XM_011602512	ENSTRUP00000018355	429 (aa)	XP_011600814	H2T117

Gene Model

Click here to download ENSTRUG00000007426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000007426's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000007426	-	69	63.830	ENSTRUG00000013604	pcbp3	93	63.830
ENSTRUG00000007426	-	58	63.128	ENSTRUG00000017789	zgc:110045	88	63.128
ENSTRUG00000007426	-	75	56.176	ENSTRUG00000009361	pcbp2	98	56.176
ENSTRUG00000007426	-	68	60.000	ENSTRUG00000006280	-	86	60.000
ENSTRUG00000007426	-	86	53.779	ENSTRUG00000011419	PCBP2	97	53.779

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000007426	-	97	53.776	ENSG00000090097	PCBP4	92	65.584	Homo_sapiens
ENSTRUG00000007426	-	53	84.375	ENSAPOG00000018462	-	71	84.375	Acanthochromis_polyacanthus
ENSTRUG00000007426	-	100	89.686	ENSAPOG00000009897	-	98	89.686	Acanthochromis_polyacanthus
ENSTRUG00000007426	-	97	54.005	ENSAMEG00000009211	PCBP4	97	54.442	Ailuropoda_melanoleuca
ENSTRUG00000007426	-	94	92.840	ENSACIG00000020434	-	98	92.840	Amphilophus_citrinellus
ENSTRUG00000007426	-	94	73.934	ENSACIG00000015264	pcbp4	94	73.303	Amphilophus_citrinellus
ENSTRUG00000007426	-	90	64.286	ENSAOCG00000006924	-	100	64.796	Amphiprion_ocellaris
ENSTRUG00000007426	-	100	93.240	ENSAOCG00000021366	-	100	93.240	Amphiprion_ocellaris
ENSTRUG00000007426	-	94	66.585	ENSAPEG00000009555	-	78	90.576	Amphiprion_percula
ENSTRUG00000007426	-	94	76.145	ENSAPEG00000023157	pcbp4	99	76.867	Amphiprion_percula
ENSTRUG00000007426	-	100	90.639	ENSATEG00000006511	-	100	90.639	Anabas_testudineus
ENSTRUG00000007426	-	94	69.249	ENSATEG00000008529	pcbp4	95	68.372	Anabas_testudineus
ENSTRUG00000007426	-	99	56.951	ENSACAG00000011701	PCBP4	99	56.951	Anolis_carolinensis
ENSTRUG00000007426	-	97	54.630	ENSANAG00000023072	PCBP4	97	55.300	Aotus_nancymaae
ENSTRUG00000007426	-	100	69.295	ENSACLG00000013348	pcbp4	96	69.502	Astatotilapia_calliptera
ENSTRUG00000007426	-	100	91.608	ENSACLG00000025246	-	100	91.608	Astatotilapia_calliptera
ENSTRUG00000007426	-	100	78.901	ENSAMXG00000033125	pcbp4	98	79.121	Astyanax_mexicanus
ENSTRUG00000007426	-	97	53.776	ENSBTAG00000018622	PCBP4	97	54.442	Bos_taurus
ENSTRUG00000007426	-	97	54.005	ENSCJAG00000005783	PCBP4	97	54.670	Callithrix_jacchus
ENSTRUG00000007426	-	97	54.005	ENSCAFG00000010019	PCBP4	97	54.442	Canis_familiaris
ENSTRUG00000007426	-	97	54.005	ENSCAFG00020022361	PCBP4	97	54.442	Canis_lupus_dingo
ENSTRUG00000007426	-	97	54.608	ENSCHIG00000012918	PCBP4	97	55.275	Capra_hircus
ENSTRUG00000007426	-	97	55.324	ENSTSYG00000008765	PCBP4	97	55.760	Carlito_syrichta
ENSTRUG00000007426	-	97	53.776	ENSCAPG00000005895	PCBP4	97	54.442	Cavia_aperea
ENSTRUG00000007426	-	97	53.776	ENSCPOG00000014617	PCBP4	97	54.442	Cavia_porcellus
ENSTRUG00000007426	-	97	54.110	ENSCCAG00000033268	PCBP4	97	54.773	Cebus_capucinus
ENSTRUG00000007426	-	97	54.713	ENSCATG00000032034	PCBP4	97	55.149	Cercocebus_atys
ENSTRUG00000007426	-	97	54.253	ENSCLAG00000008356	PCBP4	97	54.920	Chinchilla_lanigera
ENSTRUG00000007426	-	97	54.005	ENSCSAG00000013913	PCBP4	97	54.670	Chlorocebus_sabaeus
ENSTRUG00000007426	-	97	57.078	ENSCPBG00000016554	PCBP4	95	57.078	Chrysemys_picta_bellii
ENSTRUG00000007426	-	97	54.713	ENSCANG00000038865	PCBP4	97	55.149	Colobus_angolensis_palliatus
ENSTRUG00000007426	-	97	55.012	ENSCGRG00001014953	Pcbp4	97	55.684	Cricetulus_griseus_chok1gshd
ENSTRUG00000007426	-	97	55.012	ENSCGRG00000008617	Pcbp4	97	55.684	Cricetulus_griseus_crigri
ENSTRUG00000007426	-	100	63.958	ENSCSEG00000014487	pcbp4	97	65.481	Cynoglossus_semilaevis
ENSTRUG00000007426	-	100	84.897	ENSCSEG00000021041	PCBP4	100	84.897	Cynoglossus_semilaevis
ENSTRUG00000007426	-	94	69.065	ENSCVAG00000003674	pcbp4	95	67.773	Cyprinodon_variegatus
ENSTRUG00000007426	-	100	89.498	ENSCVAG00000013090	-	100	88.578	Cyprinodon_variegatus
ENSTRUG00000007426	-	100	77.533	ENSDARG00000024276	pcbp4	100	77.427	Danio_rerio
ENSTRUG00000007426	-	94	54.167	ENSDNOG00000033951	PCBP4	87	50.602	Dasypus_novemcinctus
ENSTRUG00000007426	-	97	53.318	ENSDORG00000000573	Pcbp4	97	54.214	Dipodomys_ordii
ENSTRUG00000007426	-	67	56.550	ENSETEG00000001778	PCBP4	97	56.550	Echinops_telfairi
ENSTRUG00000007426	-	97	53.318	ENSEASG00005012889	PCBP4	97	53.986	Equus_asinus_asinus
ENSTRUG00000007426	-	97	53.318	ENSECAG00000024218	PCBP4	97	53.986	Equus_caballus
ENSTRUG00000007426	-	100	80.531	ENSELUG00000001870	-	98	80.531	Esox_lucius
ENSTRUG00000007426	-	100	71.245	ENSELUG00000018204	pcbp4	98	72.258	Esox_lucius
ENSTRUG00000007426	-	97	53.776	ENSFCAG00000009148	PCBP4	97	54.442	Felis_catus
ENSTRUG00000007426	-	96	54.186	ENSFALG00000008831	PCBP4	95	54.630	Ficedula_albicollis
ENSTRUG00000007426	-	97	54.128	ENSFDAG00000012692	PCBP4	99	54.359	Fukomys_damarensis
ENSTRUG00000007426	-	94	66.339	ENSFHEG00000002769	-	97	66.339	Fundulus_heteroclitus
ENSTRUG00000007426	-	100	82.366	ENSGMOG00000017799	-	100	82.366	Gadus_morhua
ENSTRUG00000007426	-	97	53.881	ENSGALG00000027695	PCBP4	97	54.795	Gallus_gallus
ENSTRUG00000007426	-	59	88.816	ENSGAFG00000018301	pcbp4	64	88.816	Gambusia_affinis
ENSTRUG00000007426	-	82	87.193	ENSGAFG00000021090	-	78	87.193	Gambusia_affinis
ENSTRUG00000007426	-	100	84.375	ENSGACG00000002664	-	100	85.045	Gasterosteus_aculeatus
ENSTRUG00000007426	-	97	57.534	ENSGAGG00000022116	PCBP4	95	57.534	Gopherus_agassizii
ENSTRUG00000007426	-	97	53.776	ENSGGOG00000012474	PCBP4	97	54.442	Gorilla_gorilla
ENSTRUG00000007426	-	100	91.375	ENSHBUG00000005329	-	100	91.375	Haplochromis_burtoni
ENSTRUG00000007426	-	100	69.087	ENSHBUG00000009472	pcbp4	96	69.295	Haplochromis_burtoni
ENSTRUG00000007426	-	97	54.110	ENSHGLG00000012018	PCBP4	97	54.773	Heterocephalus_glaber_female
ENSTRUG00000007426	-	97	53.864	ENSHGLG00100008748	PCBP4	97	54.525	Heterocephalus_glaber_male
ENSTRUG00000007426	-	100	81.655	ENSHCOG00000010838	-	92	94.079	Hippocampus_comes
ENSTRUG00000007426	-	100	79.510	ENSIPUG00000008212	pcbp4	98	79.510	Ictalurus_punctatus
ENSTRUG00000007426	-	97	55.012	ENSSTOG00000002573	PCBP4	97	55.684	Ictidomys_tridecemlineatus
ENSTRUG00000007426	-	97	55.012	ENSJJAG00000016235	Pcbp4	97	55.684	Jaculus_jaculus
ENSTRUG00000007426	-	100	87.668	ENSKMAG00000017554	-	98	87.668	Kryptolebias_marmoratus
ENSTRUG00000007426	-	100	71.581	ENSKMAG00000014252	pcbp4	96	71.581	Kryptolebias_marmoratus
ENSTRUG00000007426	-	100	91.972	ENSLBEG00000011345	-	100	91.972	Labrus_bergylta
ENSTRUG00000007426	-	99	62.387	ENSLACG00000015899	PCBP4	90	73.684	Latimeria_chalumnae
ENSTRUG00000007426	-	100	76.562	ENSLOCG00000013402	pcbp4	98	77.283	Lepisosteus_oculatus
ENSTRUG00000007426	-	94	55.556	ENSLAFG00000010732	PCBP4	100	56.020	Loxodonta_africana
ENSTRUG00000007426	-	97	54.713	ENSMFAG00000001431	PCBP4	97	55.149	Macaca_fascicularis
ENSTRUG00000007426	-	97	54.713	ENSMMUG00000022205	PCBP4	97	55.149	Macaca_mulatta
ENSTRUG00000007426	-	97	54.713	ENSMNEG00000028553	PCBP4	97	55.149	Macaca_nemestrina
ENSTRUG00000007426	-	97	54.713	ENSMLEG00000027083	PCBP4	97	55.149	Mandrillus_leucophaeus
ENSTRUG00000007426	-	100	92.483	ENSMAMG00000011364	-	100	92.483	Mastacembelus_armatus
ENSTRUG00000007426	-	100	71.429	ENSMAMG00000010163	pcbp4	95	71.855	Mastacembelus_armatus
ENSTRUG00000007426	-	100	93.007	ENSMZEG00005023631	-	100	93.007	Maylandia_zebra
ENSTRUG00000007426	-	100	69.295	ENSMZEG00005008852	pcbp4	94	74.704	Maylandia_zebra
ENSTRUG00000007426	-	52	64.516	ENSMGAG00000005091	-	85	64.516	Meleagris_gallopavo
ENSTRUG00000007426	-	68	52.535	ENSMGAG00000003895	-	99	52.535	Meleagris_gallopavo
ENSTRUG00000007426	-	97	54.110	ENSMAUG00000021064	Pcbp4	97	54.773	Mesocricetus_auratus
ENSTRUG00000007426	-	97	54.233	ENSMICG00000002686	PCBP4	97	54.773	Microcebus_murinus
ENSTRUG00000007426	-	97	54.462	ENSMOCG00000013557	Pcbp4	97	55.125	Microtus_ochrogaster
ENSTRUG00000007426	-	100	91.156	ENSMMOG00000020533	-	100	91.156	Mola_mola
ENSTRUG00000007426	-	70	63.462	ENSMMOG00000017756	pcbp4	92	63.462	Mola_mola
ENSTRUG00000007426	-	97	53.547	ENSMODG00000011790	PCBP4	82	53.776	Monodelphis_domestica
ENSTRUG00000007426	-	92	92.893	ENSMALG00000022117	-	100	92.722	Monopterus_albus
ENSTRUG00000007426	-	91	74.396	ENSMALG00000020318	pcbp4	87	74.638	Monopterus_albus
ENSTRUG00000007426	-	97	54.005	MGP_CAROLIEiJ_G0032623	Pcbp4	93	66.304	Mus_caroli
ENSTRUG00000007426	-	97	54.005	ENSMUSG00000023495	Pcbp4	93	66.304	Mus_musculus
ENSTRUG00000007426	-	97	54.005	MGP_PahariEiJ_G0015491	Pcbp4	93	66.304	Mus_pahari
ENSTRUG00000007426	-	97	54.005	MGP_SPRETEiJ_G0033768	-	93	66.304	Mus_spretus
ENSTRUG00000007426	-	97	53.776	ENSMPUG00000011766	PCBP4	97	54.442	Mustela_putorius_furo
ENSTRUG00000007426	-	98	53.864	ENSNGAG00000013148	Pcbp4	99	54.278	Nannospalax_galili
ENSTRUG00000007426	-	100	93.240	ENSNBRG00000015885	-	100	93.240	Neolamprologus_brichardi
ENSTRUG00000007426	-	96	64.531	ENSNBRG00000007475	pcbp4	98	64.531	Neolamprologus_brichardi
ENSTRUG00000007426	-	97	54.713	ENSNLEG00000007064	PCBP4	97	55.149	Nomascus_leucogenys
ENSTRUG00000007426	-	94	48.115	ENSMEUG00000006917	PCBP4	95	48.330	Notamacropus_eugenii
ENSTRUG00000007426	-	94	51.016	ENSOPRG00000008763	PCBP4	98	51.461	Ochotona_princeps
ENSTRUG00000007426	-	97	53.881	ENSODEG00000018230	PCBP4	97	54.545	Octodon_degus
ENSTRUG00000007426	-	99	52.252	ENSOANG00000014110	PCBP4	96	52.915	Ornithorhynchus_anatinus
ENSTRUG00000007426	-	97	54.005	ENSOCUG00000025336	PCBP4	97	54.670	Oryctolagus_cuniculus
ENSTRUG00000007426	-	100	68.000	ENSORLG00000003061	pcbp4	96	68.000	Oryzias_latipes
ENSTRUG00000007426	-	100	88.036	ENSORLG00000009899	-	100	88.036	Oryzias_latipes
ENSTRUG00000007426	-	100	87.892	ENSORLG00020001183	-	100	86.036	Oryzias_latipes_hni
ENSTRUG00000007426	-	100	88.341	ENSORLG00015017819	-	98	88.341	Oryzias_latipes_hsok
ENSTRUG00000007426	-	100	67.223	ENSORLG00015019262	pcbp4	96	67.015	Oryzias_latipes_hsok
ENSTRUG00000007426	-	100	88.565	ENSOMEG00000011545	-	98	88.565	Oryzias_melastigma
ENSTRUG00000007426	-	100	65.458	ENSOMEG00000003516	-	100	65.197	Oryzias_melastigma
ENSTRUG00000007426	-	97	54.005	ENSOGAG00000032384	PCBP4	97	54.442	Otolemur_garnettii
ENSTRUG00000007426	-	94	55.283	ENSOARG00000006603	PCBP4	98	55.746	Ovis_aries
ENSTRUG00000007426	-	97	53.547	ENSPPAG00000038764	PCBP4	97	54.214	Pan_paniscus
ENSTRUG00000007426	-	97	53.776	ENSPPRG00000006165	PCBP4	97	54.442	Panthera_pardus
ENSTRUG00000007426	-	97	53.776	ENSPTIG00000005401	PCBP4	93	54.442	Panthera_tigris_altaica
ENSTRUG00000007426	-	97	53.776	ENSPTRG00000014983	PCBP4	97	54.442	Pan_troglodytes
ENSTRUG00000007426	-	97	54.713	ENSPANG00000026222	PCBP4	97	55.149	Papio_anubis
ENSTRUG00000007426	-	100	78.300	ENSPKIG00000010244	pcbp4	100	79.439	Paramormyrops_kingsleyae
ENSTRUG00000007426	-	100	70.917	ENSPKIG00000005487	-	98	70.917	Paramormyrops_kingsleyae
ENSTRUG00000007426	-	81	55.676	ENSPSIG00000011286	PCBP4	96	55.676	Pelodiscus_sinensis
ENSTRUG00000007426	-	94	72.573	ENSPMGG00000000063	pcbp4	97	72.816	Periophthalmus_magnuspinnatus
ENSTRUG00000007426	-	100	83.562	ENSPMGG00000022732	-	100	84.018	Periophthalmus_magnuspinnatus
ENSTRUG00000007426	-	97	54.358	ENSPEMG00000009276	Pcbp4	97	55.023	Peromyscus_maniculatus_bairdii
ENSTRUG00000007426	-	97	54.233	ENSPCIG00000018151	PCBP4	93	54.462	Phascolarctos_cinereus
ENSTRUG00000007426	-	100	88.565	ENSPFOG00000002989	-	98	88.565	Poecilia_formosa
ENSTRUG00000007426	-	97	66.147	ENSPFOG00000014474	pcbp4	96	81.818	Poecilia_formosa
ENSTRUG00000007426	-	85	69.713	ENSPLAG00000023316	pcbp4	89	71.279	Poecilia_latipinna
ENSTRUG00000007426	-	94	60.142	ENSPLAG00000011438	-	97	60.142	Poecilia_latipinna
ENSTRUG00000007426	-	64	61.092	ENSPMEG00000012990	pcbp4	100	63.087	Poecilia_mexicana
ENSTRUG00000007426	-	100	86.480	ENSPREG00000017370	-	100	86.480	Poecilia_reticulata
ENSTRUG00000007426	-	51	91.071	ENSPREG00000021498	-	73	91.071	Poecilia_reticulata
ENSTRUG00000007426	-	97	54.005	ENSPPYG00000013822	PCBP4	97	54.670	Pongo_abelii
ENSTRUG00000007426	-	94	51.708	ENSPCAG00000009515	PCBP4	98	52.164	Procavia_capensis
ENSTRUG00000007426	-	97	54.005	ENSPCOG00000027535	PCBP4	97	54.670	Propithecus_coquereli
ENSTRUG00000007426	-	94	48.904	ENSPVAG00000012474	PCBP4	97	49.563	Pteropus_vampyrus
ENSTRUG00000007426	-	94	74.408	ENSPNYG00000019234	pcbp4	95	74.468	Pundamilia_nyererei
ENSTRUG00000007426	-	100	92.774	ENSPNYG00000003098	-	100	92.774	Pundamilia_nyererei
ENSTRUG00000007426	-	100	79.295	ENSPNAG00000025434	pcbp4	98	79.515	Pygocentrus_nattereri
ENSTRUG00000007426	-	97	54.005	ENSRNOG00000012406	Pcbp4	97	54.670	Rattus_norvegicus
ENSTRUG00000007426	-	97	54.713	ENSRBIG00000043793	PCBP4	97	55.149	Rhinopithecus_bieti
ENSTRUG00000007426	-	97	54.713	ENSRROG00000034589	PCBP4	97	55.149	Rhinopithecus_roxellana
ENSTRUG00000007426	-	97	54.110	ENSSBOG00000027029	PCBP4	97	54.773	Saimiri_boliviensis_boliviensis
ENSTRUG00000007426	-	69	54.772	ENSSHAG00000007362	PCBP4	91	54.772	Sarcophilus_harrisii
ENSTRUG00000007426	-	100	70.601	ENSSFOG00015012075	PCBP4	98	70.601	Scleropages_formosus
ENSTRUG00000007426	-	72	81.494	ENSSFOG00015008221	pcbp4	60	81.494	Scleropages_formosus
ENSTRUG00000007426	-	100	91.163	ENSSMAG00000009392	-	100	91.163	Scophthalmus_maximus
ENSTRUG00000007426	-	100	69.474	ENSSMAG00000005827	pcbp4	94	70.947	Scophthalmus_maximus
ENSTRUG00000007426	-	100	94.172	ENSSDUG00000015540	-	100	94.172	Seriola_dumerili
ENSTRUG00000007426	-	94	76.570	ENSSDUG00000017719	pcbp4	97	76.627	Seriola_dumerili
ENSTRUG00000007426	-	54	87.582	ENSSLDG00000024847	-	67	87.582	Seriola_lalandi_dorsalis
ENSTRUG00000007426	-	100	94.172	ENSSLDG00000007851	-	100	94.172	Seriola_lalandi_dorsalis
ENSTRUG00000007426	-	99	52.715	ENSSPUG00000000194	PCBP4	99	52.715	Sphenodon_punctatus
ENSTRUG00000007426	-	100	89.462	ENSSPAG00000003033	-	100	89.044	Stegastes_partitus
ENSTRUG00000007426	-	85	64.249	ENSSPAG00000019058	-	92	64.767	Stegastes_partitus
ENSTRUG00000007426	-	97	53.776	ENSSSCG00000028446	PCBP4	97	54.442	Sus_scrofa
ENSTRUG00000007426	-	71	52.778	ENSTGUG00000006393	PCBP4	97	52.599	Taeniopygia_guttata
ENSTRUG00000007426	-	100	86.099	ENSTNIG00000017887	-	99	86.099	Tetraodon_nigroviridis
ENSTRUG00000007426	-	85	38.670	ENSTBEG00000015770	PCBP4	100	39.461	Tupaia_belangeri
ENSTRUG00000007426	-	75	53.439	ENSTTRG00000001443	PCBP4	84	54.450	Tursiops_truncatus
ENSTRUG00000007426	-	97	50.233	ENSUAMG00000020871	PCBP4	100	54.667	Ursus_americanus
ENSTRUG00000007426	-	87	55.471	ENSUMAG00000021609	PCBP4	89	55.224	Ursus_maritimus
ENSTRUG00000007426	-	97	54.005	ENSVVUG00000026857	PCBP4	97	54.442	Vulpes_vulpes
ENSTRUG00000007426	-	86	81.671	ENSXCOG00000000111	-	100	81.671	Xiphophorus_couchianus
ENSTRUG00000007426	-	90	67.734	ENSXMAG00000022188	-	90	69.704	Xiphophorus_maculatus
ENSTRUG00000007426	-	100	88.117	ENSXMAG00000024530	-	98	88.117	Xiphophorus_maculatus
ENSTRUG00000007426	-	79	76.602	ENSXMAG00000015709	pcbp4	77	76.152	Xiphophorus_maculatus