EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000007429 (Gene tree)
Gene ID: 101061746
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 12700 bases
Position: chr20:263769-276468
Accession: 101061746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000018368	Surp	PF01805.20	6.8e-17	1	1
ENSTRUP00000018369	Surp	PF01805.20	8.8e-17	1	1
ENSTRUP00000018366	Surp	PF01805.20	9e-17	1	1
ENSTRUP00000018370	Surp	PF01805.20	1.6e-16	1	1
ENSTRUP00000018368	G-patch	PF01585.23	9.8e-10	1	1
ENSTRUP00000018369	G-patch	PF01585.23	9.9e-10	1	1
ENSTRUP00000018366	G-patch	PF01585.23	1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000018442	-	3586	-	ENSTRUP00000018366	947 (aa)	-	H2T128
ENSTRUT00000018444	-	3488	XM_003973799	ENSTRUP00000018368	926 (aa)	XP_003973848	H2T130
ENSTRUT00000018445	-	3547	-	ENSTRUP00000018369	934 (aa)	-	H2T131
ENSTRUT00000018446	-	2427	-	ENSTRUP00000018370	808 (aa)	-	H2T132

Gene Model

Click here to download ENSTRUG00000007429's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000007429's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000007429	cherp	93	60.000	ENSG00000085872	CHERP	80	64.136	Homo_sapiens
ENSTRUG00000007429	cherp	61	77.408	ENSAPOG00000009646	cherp	99	76.357	Acanthochromis_polyacanthus
ENSTRUG00000007429	cherp	98	62.912	ENSAMEG00000010048	CHERP	79	65.067	Ailuropoda_melanoleuca
ENSTRUG00000007429	cherp	88	83.219	ENSACIG00000019242	cherp	79	81.557	Amphilophus_citrinellus
ENSTRUG00000007429	cherp	100	79.572	ENSAOCG00000017846	cherp	100	78.182	Amphiprion_ocellaris
ENSTRUG00000007429	cherp	100	80.621	ENSAPEG00000021128	cherp	100	79.122	Amphiprion_percula
ENSTRUG00000007429	cherp	100	81.644	ENSATEG00000006341	cherp	99	80.896	Anabas_testudineus
ENSTRUG00000007429	cherp	86	65.034	ENSAPLG00000010773	CHERP	78	63.488	Anas_platyrhynchos
ENSTRUG00000007429	cherp	93	59.196	ENSANAG00000024284	CHERP	82	60.392	Aotus_nancymaae
ENSTRUG00000007429	cherp	100	81.731	ENSACLG00000020053	cherp	100	80.662	Astatotilapia_calliptera
ENSTRUG00000007429	cherp	99	68.470	ENSAMXG00000021637	cherp	94	67.846	Astyanax_mexicanus
ENSTRUG00000007429	cherp	99	60.124	ENSBTAG00000005289	CHERP	82	64.529	Bos_taurus
ENSTRUG00000007429	cherp	93	59.196	ENSCJAG00000040462	CHERP	82	61.886	Callithrix_jacchus
ENSTRUG00000007429	cherp	88	64.220	ENSCAFG00000015671	CHERP	80	64.660	Canis_familiaris
ENSTRUG00000007429	cherp	99	59.175	ENSCAFG00020009941	CHERP	99	58.220	Canis_lupus_dingo
ENSTRUG00000007429	cherp	87	76.842	ENSCHIG00000013765	CHERP	94	86.076	Capra_hircus
ENSTRUG00000007429	cherp	87	63.531	ENSCAPG00000000910	CHERP	72	61.128	Cavia_aperea
ENSTRUG00000007429	cherp	99	59.263	ENSCPOG00000019949	CHERP	79	63.684	Cavia_porcellus
ENSTRUG00000007429	cherp	93	59.318	ENSCCAG00000031534	CHERP	79	63.338	Cebus_capucinus
ENSTRUG00000007429	cherp	93	59.367	ENSCATG00000031409	CHERP	79	63.123	Cercocebus_atys
ENSTRUG00000007429	cherp	77	62.518	ENSCLAG00000005484	CHERP	73	63.582	Chinchilla_lanigera
ENSTRUG00000007429	cherp	93	60.123	ENSCSAG00000005740	CHERP	80	64.136	Chlorocebus_sabaeus
ENSTRUG00000007429	cherp	99	65.328	ENSCPBG00000014970	CHERP	80	64.116	Chrysemys_picta_bellii
ENSTRUG00000007429	cherp	66	55.914	ENSCING00000004814	-	54	72.340	Ciona_intestinalis
ENSTRUG00000007429	cherp	50	73.118	ENSCSAVG00000002455	-	50	73.118	Ciona_savignyi
ENSTRUG00000007429	cherp	93	60.741	ENSCANG00000032053	CHERP	80	64.136	Colobus_angolensis_palliatus
ENSTRUG00000007429	cherp	92	61.152	ENSCGRG00001023316	Cherp	99	63.958	Cricetulus_griseus_chok1gshd
ENSTRUG00000007429	cherp	92	62.112	ENSCGRG00000015901	Cherp	79	64.456	Cricetulus_griseus_crigri
ENSTRUG00000007429	cherp	99	78.004	ENSCSEG00000019700	cherp	100	77.754	Cynoglossus_semilaevis
ENSTRUG00000007429	cherp	84	80.029	ENSCVAG00000003622	cherp	93	77.842	Cyprinodon_variegatus
ENSTRUG00000007429	cherp	100	68.650	ENSDARG00000021812	cherp	100	78.599	Danio_rerio
ENSTRUG00000007429	cherp	98	60.938	ENSDORG00000027623	Cherp	80	65.013	Dipodomys_ordii
ENSTRUG00000007429	cherp	85	70.386	ENSETEG00000019543	CHERP	62	73.460	Echinops_telfairi
ENSTRUG00000007429	cherp	88	63.434	ENSEASG00005000428	CHERP	73	64.529	Equus_asinus_asinus
ENSTRUG00000007429	cherp	88	64.351	ENSECAG00000012713	CHERP	80	64.398	Equus_caballus
ENSTRUG00000007429	cherp	99	71.027	ENSELUG00000023026	cherp	80	72.592	Esox_lucius
ENSTRUG00000007429	cherp	88	62.629	ENSFCAG00000013172	CHERP	79	63.565	Felis_catus
ENSTRUG00000007429	cherp	88	65.680	ENSFALG00000013410	CHERP	69	63.900	Ficedula_albicollis
ENSTRUG00000007429	cherp	93	55.970	ENSFDAG00000015981	CHERP	81	57.289	Fukomys_damarensis
ENSTRUG00000007429	cherp	88	72.931	ENSFHEG00000009720	cherp	79	70.266	Fundulus_heteroclitus
ENSTRUG00000007429	cherp	88	76.000	ENSGMOG00000008654	cherp	80	75.577	Gadus_morhua
ENSTRUG00000007429	cherp	88	65.541	ENSGALG00000003824	CHERP	70	63.804	Gallus_gallus
ENSTRUG00000007429	cherp	99	77.312	ENSGACG00000002053	cherp	99	75.161	Gasterosteus_aculeatus
ENSTRUG00000007429	cherp	99	64.885	ENSGAGG00000014208	CHERP	80	63.984	Gopherus_agassizii
ENSTRUG00000007429	cherp	58	86.076	ENSGGOG00000016348	CHERP	72	53.204	Gorilla_gorilla
ENSTRUG00000007429	cherp	100	81.838	ENSHBUG00000007405	cherp	100	80.769	Haplochromis_burtoni
ENSTRUG00000007429	cherp	88	63.696	ENSHGLG00000002993	CHERP	82	63.903	Heterocephalus_glaber_female
ENSTRUG00000007429	cherp	88	78.322	ENSHCOG00000007691	cherp	99	74.015	Hippocampus_comes
ENSTRUG00000007429	cherp	100	70.917	ENSIPUG00000025008	cherp	100	70.222	Ictalurus_punctatus
ENSTRUG00000007429	cherp	98	60.251	ENSSTOG00000012089	CHERP	79	65.027	Ictidomys_tridecemlineatus
ENSTRUG00000007429	cherp	99	59.021	ENSJJAG00000017982	Cherp	81	64.491	Jaculus_jaculus
ENSTRUG00000007429	cherp	88	83.006	ENSKMAG00000009101	cherp	99	79.648	Kryptolebias_marmoratus
ENSTRUG00000007429	cherp	88	82.657	ENSLBEG00000007586	cherp	91	81.528	Labrus_bergylta
ENSTRUG00000007429	cherp	100	60.163	ENSLACG00000018221	CHERP	100	59.045	Latimeria_chalumnae
ENSTRUG00000007429	cherp	88	70.014	ENSLOCG00000003654	cherp	99	69.510	Lepisosteus_oculatus
ENSTRUG00000007429	cherp	88	65.633	ENSLAFG00000009096	CHERP	80	65.013	Loxodonta_africana
ENSTRUG00000007429	cherp	93	59.196	ENSMFAG00000033267	CHERP	79	63.206	Macaca_fascicularis
ENSTRUG00000007429	cherp	99	61.003	ENSMMUG00000012958	CHERP	82	63.097	Macaca_mulatta
ENSTRUG00000007429	cherp	93	59.196	ENSMNEG00000004125	CHERP	79	63.206	Macaca_nemestrina
ENSTRUG00000007429	cherp	75	76.316	ENSMLEG00000044337	CHERP	67	86.076	Mandrillus_leucophaeus
ENSTRUG00000007429	cherp	100	81.458	ENSMAMG00000022269	cherp	100	80.279	Mastacembelus_armatus
ENSTRUG00000007429	cherp	100	81.624	ENSMZEG00005018014	cherp	100	80.556	Maylandia_zebra
ENSTRUG00000007429	cherp	77	67.597	ENSMGAG00000005571	CHERP	71	65.337	Meleagris_gallopavo
ENSTRUG00000007429	cherp	92	61.255	ENSMAUG00000015856	Cherp	99	63.788	Mesocricetus_auratus
ENSTRUG00000007429	cherp	99	59.423	ENSMICG00000004577	CHERP	87	62.652	Microcebus_murinus
ENSTRUG00000007429	cherp	92	62.718	ENSMOCG00000014697	Cherp	79	64.575	Microtus_ochrogaster
ENSTRUG00000007429	cherp	99	81.650	ENSMMOG00000008525	cherp	96	82.478	Mola_mola
ENSTRUG00000007429	cherp	100	80.871	ENSMALG00000020688	cherp	100	79.702	Monopterus_albus
ENSTRUG00000007429	cherp	88	62.872	MGP_CAROLIEiJ_G0031220	Cherp	86	62.260	Mus_caroli
ENSTRUG00000007429	cherp	88	62.791	ENSMUSG00000052488	Cherp	82	63.046	Mus_musculus
ENSTRUG00000007429	cherp	93	62.871	MGP_PahariEiJ_G0021685	Cherp	86	62.788	Mus_pahari
ENSTRUG00000007429	cherp	93	62.485	MGP_SPRETEiJ_G0032341	Cherp	86	62.410	Mus_spretus
ENSTRUG00000007429	cherp	88	64.005	ENSMPUG00000016023	CHERP	77	64.314	Mustela_putorius_furo
ENSTRUG00000007429	cherp	88	58.065	ENSMLUG00000013881	CHERP	79	59.495	Myotis_lucifugus
ENSTRUG00000007429	cherp	100	77.468	ENSNBRG00000001914	cherp	82	81.233	Neolamprologus_brichardi
ENSTRUG00000007429	cherp	93	60.247	ENSNLEG00000005536	CHERP	80	64.267	Nomascus_leucogenys
ENSTRUG00000007429	cherp	80	76.512	ENSMEUG00000010840	CHERP	69	76.512	Notamacropus_eugenii
ENSTRUG00000007429	cherp	98	62.866	ENSODEG00000001528	CHERP	81	64.628	Octodon_degus
ENSTRUG00000007429	cherp	100	82.158	ENSONIG00000007686	cherp	100	80.342	Oreochromis_niloticus
ENSTRUG00000007429	cherp	99	80.324	ENSORLG00000000138	cherp	99	80.509	Oryzias_latipes
ENSTRUG00000007429	cherp	99	80.108	ENSORLG00020013142	cherp	99	80.288	Oryzias_latipes_hni
ENSTRUG00000007429	cherp	99	80.216	ENSORLG00015008911	cherp	99	80.399	Oryzias_latipes_hsok
ENSTRUG00000007429	cherp	99	80.173	ENSOMEG00000016947	cherp	99	80.288	Oryzias_melastigma
ENSTRUG00000007429	cherp	88	62.614	ENSOGAG00000005834	CHERP	79	63.220	Otolemur_garnettii
ENSTRUG00000007429	cherp	88	56.332	ENSOARG00000018876	CHERP	77	57.105	Ovis_aries
ENSTRUG00000007429	cherp	93	59.246	ENSPPAG00000029195	CHERP	79	63.123	Pan_paniscus
ENSTRUG00000007429	cherp	88	62.629	ENSPPRG00000003275	CHERP	79	63.565	Panthera_pardus
ENSTRUG00000007429	cherp	98	54.028	ENSPTIG00000019778	CHERP	84	54.201	Panthera_tigris_altaica
ENSTRUG00000007429	cherp	99	56.863	ENSPTRG00000010647	CHERP	80	64.052	Pan_troglodytes
ENSTRUG00000007429	cherp	93	59.196	ENSPANG00000011698	CHERP	79	63.206	Papio_anubis
ENSTRUG00000007429	cherp	87	63.989	ENSPKIG00000000423	cherp	98	64.686	Paramormyrops_kingsleyae
ENSTRUG00000007429	cherp	88	66.307	ENSPSIG00000011974	CHERP	79	63.926	Pelodiscus_sinensis
ENSTRUG00000007429	cherp	87	93.671	ENSPMGG00000023606	cherp	87	93.671	Periophthalmus_magnuspinnatus
ENSTRUG00000007429	cherp	88	61.990	ENSPEMG00000011238	Cherp	99	63.382	Peromyscus_maniculatus_bairdii
ENSTRUG00000007429	cherp	88	65.092	ENSPCIG00000019615	CHERP	77	64.056	Phascolarctos_cinereus
ENSTRUG00000007429	cherp	100	77.564	ENSPFOG00000016899	cherp	99	77.778	Poecilia_formosa
ENSTRUG00000007429	cherp	86	75.901	ENSPMEG00000002214	cherp	100	74.520	Poecilia_mexicana
ENSTRUG00000007429	cherp	99	78.370	ENSPREG00000020774	cherp	99	77.741	Poecilia_reticulata
ENSTRUG00000007429	cherp	88	62.500	ENSPPYG00000009691	CHERP	86	60.901	Pongo_abelii
ENSTRUG00000007429	cherp	89	74.468	ENSPCAG00000001337	CHERP	89	83.544	Procavia_capensis
ENSTRUG00000007429	cherp	54	81.967	ENSPCOG00000022788	CHERP	99	83.582	Propithecus_coquereli
ENSTRUG00000007429	cherp	89	75.532	ENSPVAG00000004320	CHERP	89	84.810	Pteropus_vampyrus
ENSTRUG00000007429	cherp	100	82.692	ENSPNYG00000003942	cherp	100	80.876	Pundamilia_nyererei
ENSTRUG00000007429	cherp	100	70.175	ENSPNAG00000017179	cherp	100	68.937	Pygocentrus_nattereri
ENSTRUG00000007429	cherp	88	62.743	ENSRNOG00000012323	Cherp	82	63.098	Rattus_norvegicus
ENSTRUG00000007429	cherp	93	61.567	ENSRBIG00000038621	CHERP	84	63.097	Rhinopithecus_bieti
ENSTRUG00000007429	cherp	93	61.567	ENSRROG00000040770	CHERP	84	63.097	Rhinopithecus_roxellana
ENSTRUG00000007429	cherp	93	59.367	ENSSBOG00000014492	CHERP	79	63.123	Saimiri_boliviensis_boliviensis
ENSTRUG00000007429	cherp	88	62.783	ENSSFOG00015008022	cherp	92	75.000	Scleropages_formosus
ENSTRUG00000007429	cherp	99	81.906	ENSSMAG00000005362	cherp	100	79.829	Scophthalmus_maximus
ENSTRUG00000007429	cherp	100	80.524	ENSSDUG00000019712	cherp	100	79.267	Seriola_dumerili
ENSTRUG00000007429	cherp	100	81.098	ENSSLDG00000012659	cherp	100	79.831	Seriola_lalandi_dorsalis
ENSTRUG00000007429	cherp	88	66.574	ENSSPUG00000008901	CHERP	79	65.629	Sphenodon_punctatus
ENSTRUG00000007429	cherp	100	81.323	ENSSPAG00000010681	cherp	100	80.576	Stegastes_partitus
ENSTRUG00000007429	cherp	88	63.827	ENSSSCG00000013860	CHERP	80	64.660	Sus_scrofa
ENSTRUG00000007429	cherp	88	65.726	ENSTGUG00000000680	CHERP	80	63.984	Taeniopygia_guttata
ENSTRUG00000007429	cherp	99	86.805	ENSTNIG00000003363	cherp	86	85.290	Tetraodon_nigroviridis
ENSTRUG00000007429	cherp	76	66.087	ENSTTRG00000015006	CHERP	68	66.087	Tursiops_truncatus
ENSTRUG00000007429	cherp	99	59.067	ENSUAMG00000017295	CHERP	80	63.122	Ursus_americanus
ENSTRUG00000007429	cherp	77	68.919	ENSUMAG00000000965	CHERP	70	69.595	Ursus_maritimus
ENSTRUG00000007429	cherp	88	62.082	ENSVVUG00000016546	CHERP	79	63.399	Vulpes_vulpes