EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTRUG00000007438 (Gene tree)
Gene ID
101073363
Gene Symbol
dcaf13
Alias
wdsof1|zgc:55391
Full Name
DDB1 and CUL4 associated factor 13
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Minus strand
Length
5307 bases
Position
chr7:5851054-5856360
Accession
101073363
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTRUP00000018405Sof1PF04158.141e-3311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTRUT00000018481-2015XM_003965831ENSTRUP00000018405445 (aa)XP_003965880H2T167
Gene Model
Click here to download ENSTRUG00000007438's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000007438's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTRUG00000007438dcaf136632.911ENSTRUG00000007900POC1A7532.911
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTRUG00000007438dcaf139877.701ENSG00000164934DCAF1310079.167Homo_sapiens
ENSTRUG00000007438dcaf1310087.865ENSAPOG00000000524dcaf1310087.865Acanthochromis_polyacanthus
ENSTRUG00000007438dcaf1310077.303ENSAMEG00000001595DCAF139977.303Ailuropoda_melanoleuca
ENSTRUG00000007438dcaf1310086.742ENSACIG00000003110dcaf139986.742Amphilophus_citrinellus
ENSTRUG00000007438dcaf1310088.090ENSAOCG00000011982dcaf1310088.090Amphiprion_ocellaris
ENSTRUG00000007438dcaf139979.464ENSAPEG00000021156dcaf139979.464Amphiprion_percula
ENSTRUG00000007438dcaf1310087.865ENSATEG00000024751dcaf1310087.865Anabas_testudineus
ENSTRUG00000007438dcaf1310076.233ENSAPLG00000002811DCAF1310076.233Anas_platyrhynchos
ENSTRUG00000007438dcaf1310078.427ENSACAG00000009465DCAF1310078.427Anolis_carolinensis
ENSTRUG00000007438dcaf1310078.202ENSANAG00000020798DCAF1310078.202Aotus_nancymaae
ENSTRUG00000007438dcaf1310060.449ENSANAG00000023472-10060.449Aotus_nancymaae
ENSTRUG00000007438dcaf1310088.539ENSACLG00000025212dcaf139088.539Astatotilapia_calliptera
ENSTRUG00000007438dcaf1310081.348ENSAMXG00000037008dcaf1310081.348Astyanax_mexicanus
ENSTRUG00000007438dcaf139878.161ENSBTAG00000021449DCAF1310077.753Bos_taurus
ENSTRUG00000007438dcaf139451.074WBGene00022742ZK430.79351.074Caenorhabditis_elegans
ENSTRUG00000007438dcaf139878.391ENSCJAG00000016181DCAF1310077.978Callithrix_jacchus
ENSTRUG00000007438dcaf1310078.427ENSCAFG00000000663DCAF1310078.427Canis_familiaris
ENSTRUG00000007438dcaf1310078.427ENSCAFG00020003044DCAF1310078.427Canis_lupus_dingo
ENSTRUG00000007438dcaf1310078.202ENSCHIG00000020556DCAF1310078.202Capra_hircus
ENSTRUG00000007438dcaf1310076.854ENSTSYG00000003307DCAF1310076.854Carlito_syrichta
ENSTRUG00000007438dcaf139569.194ENSCAPG00000007305DCAF1310067.696Cavia_aperea
ENSTRUG00000007438dcaf1310076.404ENSCPOG00000012291DCAF1310076.404Cavia_porcellus
ENSTRUG00000007438dcaf1310077.079ENSCCAG00000033103DCAF137677.079Cebus_capucinus
ENSTRUG00000007438dcaf1310078.202ENSCATG00000032160DCAF138578.202Cercocebus_atys
ENSTRUG00000007438dcaf1310055.955ENSCATG00000037371-9655.955Cercocebus_atys
ENSTRUG00000007438dcaf1310077.753ENSCLAG00000006565DCAF1310077.753Chinchilla_lanigera
ENSTRUG00000007438dcaf1310078.202ENSCSAG00000011887DCAF1310078.202Chlorocebus_sabaeus
ENSTRUG00000007438dcaf137266.144ENSCHOG00000003007-7466.144Choloepus_hoffmanni
ENSTRUG00000007438dcaf1310079.101ENSCPBG00000026050DCAF1310079.101Chrysemys_picta_bellii
ENSTRUG00000007438dcaf139962.443ENSCING00000005282-9962.443Ciona_intestinalis
ENSTRUG00000007438dcaf1310062.780ENSCSAVG00000006538-10062.780Ciona_savignyi
ENSTRUG00000007438dcaf1310054.831ENSCANG00000038828-9654.831Colobus_angolensis_palliatus
ENSTRUG00000007438dcaf1310069.888ENSCANG00000043032DCAF137669.888Colobus_angolensis_palliatus
ENSTRUG00000007438dcaf1310079.101ENSCGRG00001023256Dcaf1310079.101Cricetulus_griseus_chok1gshd
ENSTRUG00000007438dcaf139678.169ENSCGRG00000004862Dcaf139278.169Cricetulus_griseus_crigri
ENSTRUG00000007438dcaf1310086.517ENSCSEG00000013595dcaf1310086.517Cynoglossus_semilaevis
ENSTRUG00000007438dcaf1310075.730ENSCVAG00000010337dcaf1310075.730Cyprinodon_variegatus
ENSTRUG00000007438dcaf1310080.899ENSDARG00000002267dcaf1310080.899Danio_rerio
ENSTRUG00000007438dcaf138176.731ENSDNOG00000044885DCAF139576.731Dasypus_novemcinctus
ENSTRUG00000007438dcaf1310073.543ENSDORG00000011873Dcaf1310073.543Dipodomys_ordii
ENSTRUG00000007438dcaf139959.050FBgn0036500CG72759959.050Drosophila_melanogaster
ENSTRUG00000007438dcaf1310073.154ENSETEG00000004777DCAF137773.154Echinops_telfairi
ENSTRUG00000007438dcaf139958.597ENSEBUG00000008116dcaf139958.597Eptatretus_burgeri
ENSTRUG00000007438dcaf1310078.202ENSEASG00005001266DCAF1310078.202Equus_asinus_asinus
ENSTRUG00000007438dcaf1310078.202ENSECAG00000009654DCAF1310078.202Equus_caballus
ENSTRUG00000007438dcaf1310067.785ENSEEUG00000003286DCAF137767.785Erinaceus_europaeus
ENSTRUG00000007438dcaf1310074.607ENSELUG00000006191dcaf139982.801Esox_lucius
ENSTRUG00000007438dcaf1310078.652ENSFCAG00000027256DCAF1310078.652Felis_catus
ENSTRUG00000007438dcaf1310079.551ENSFALG00000005982DCAF1310079.551Ficedula_albicollis
ENSTRUG00000007438dcaf1310077.528ENSFDAG00000014869DCAF1310077.528Fukomys_damarensis
ENSTRUG00000007438dcaf1310085.843ENSFHEG00000009965dcaf1310085.843Fundulus_heteroclitus
ENSTRUG00000007438dcaf1310084.719ENSGMOG00000005753dcaf1310084.719Gadus_morhua
ENSTRUG00000007438dcaf1310079.551ENSGALG00000034618DCAF137979.551Gallus_gallus
ENSTRUG00000007438dcaf139487.290ENSGAFG00000000368dcaf138887.290Gambusia_affinis
ENSTRUG00000007438dcaf1310085.843ENSGACG00000004840dcaf1310085.843Gasterosteus_aculeatus
ENSTRUG00000007438dcaf1310078.427ENSGAGG00000025283DCAF1310078.427Gopherus_agassizii
ENSTRUG00000007438dcaf139377.670ENSGGOG00000015124DCAF137977.251Gorilla_gorilla
ENSTRUG00000007438dcaf1310088.315ENSHBUG00000015794dcaf139088.315Haplochromis_burtoni
ENSTRUG00000007438dcaf1310077.079ENSHGLG00000008862DCAF1310077.079Heterocephalus_glaber_female
ENSTRUG00000007438dcaf1310076.854ENSHGLG00100017157DCAF1310076.854Heterocephalus_glaber_male
ENSTRUG00000007438dcaf1310086.292ENSHCOG00000014302dcaf1310086.292Hippocampus_comes
ENSTRUG00000007438dcaf1310080.899ENSIPUG00000022430dcaf1310080.899Ictalurus_punctatus
ENSTRUG00000007438dcaf139878.851ENSSTOG00000008009DCAF1310078.427Ictidomys_tridecemlineatus
ENSTRUG00000007438dcaf138180.000ENSJJAG00000000742-9480.000Jaculus_jaculus
ENSTRUG00000007438dcaf1310071.011ENSJJAG00000001990-10071.011Jaculus_jaculus
ENSTRUG00000007438dcaf1310088.090ENSKMAG00000002350dcaf1310088.090Kryptolebias_marmoratus
ENSTRUG00000007438dcaf1310089.438ENSLBEG00000002441dcaf1310089.438Labrus_bergylta
ENSTRUG00000007438dcaf1310081.124ENSLACG00000013358DCAF1310081.124Latimeria_chalumnae
ENSTRUG00000007438dcaf1310080.899ENSLOCG00000009498dcaf1310080.899Lepisosteus_oculatus
ENSTRUG00000007438dcaf1310078.652ENSLAFG00000009807DCAF1310078.652Loxodonta_africana
ENSTRUG00000007438dcaf1310078.202ENSMFAG00000008982-7778.202Macaca_fascicularis
ENSTRUG00000007438dcaf1310075.506ENSMFAG00000043378-10075.506Macaca_fascicularis
ENSTRUG00000007438dcaf138076.471ENSMMUG00000019405-7076.471Macaca_mulatta
ENSTRUG00000007438dcaf1310077.978ENSMMUG00000019594-10077.978Macaca_mulatta
ENSTRUG00000007438dcaf1310056.180ENSMNEG00000030562-9656.180Macaca_nemestrina
ENSTRUG00000007438dcaf1310075.955ENSMNEG00000035898-10075.955Macaca_nemestrina
ENSTRUG00000007438dcaf1310068.764ENSMNEG00000033963-7568.764Macaca_nemestrina
ENSTRUG00000007438dcaf1310058.202ENSMLEG00000039177-10058.202Mandrillus_leucophaeus
ENSTRUG00000007438dcaf1310078.202ENSMLEG00000041996DCAF1310078.202Mandrillus_leucophaeus
ENSTRUG00000007438dcaf1310087.865ENSMAMG00000003196dcaf1310087.865Mastacembelus_armatus
ENSTRUG00000007438dcaf1310088.539ENSMZEG00005012249dcaf139088.539Maylandia_zebra
ENSTRUG00000007438dcaf139579.384ENSMGAG00000012340DCAF139979.384Meleagris_gallopavo
ENSTRUG00000007438dcaf1310067.865ENSMAUG00000017580Dcaf1310067.865Mesocricetus_auratus
ENSTRUG00000007438dcaf139878.851ENSMICG00000006907DCAF1310078.427Microcebus_murinus
ENSTRUG00000007438dcaf1310077.528ENSMOCG00000011609Dcaf1310077.528Microtus_ochrogaster
ENSTRUG00000007438dcaf1310088.764ENSMMOG00000017905dcaf1310088.764Mola_mola
ENSTRUG00000007438dcaf1310077.528ENSMODG00000005549DCAF1310077.528Monodelphis_domestica
ENSTRUG00000007438dcaf1310087.416ENSMALG00000007415dcaf1310087.416Monopterus_albus
ENSTRUG00000007438dcaf1310079.101MGP_CAROLIEiJ_G0019757Dcaf1310079.101Mus_caroli
ENSTRUG00000007438dcaf1310078.876ENSMUSG00000022300Dcaf1310078.876Mus_musculus
ENSTRUG00000007438dcaf1310079.326MGP_PahariEiJ_G0019766Dcaf1310079.326Mus_pahari
ENSTRUG00000007438dcaf1310079.101MGP_SPRETEiJ_G0020654Dcaf1310079.101Mus_spretus
ENSTRUG00000007438dcaf139169.802ENSMPUG00000004976-9869.802Mustela_putorius_furo
ENSTRUG00000007438dcaf139878.851ENSMLUG00000007375DCAF1310078.427Myotis_lucifugus
ENSTRUG00000007438dcaf1310078.202ENSNGAG00000021670Dcaf1310078.202Nannospalax_galili
ENSTRUG00000007438dcaf1310088.539ENSNBRG00000007078dcaf1310088.539Neolamprologus_brichardi
ENSTRUG00000007438dcaf1310055.955ENSNLEG00000032043-10055.955Nomascus_leucogenys
ENSTRUG00000007438dcaf139877.701ENSNLEG00000003791DCAF137577.303Nomascus_leucogenys
ENSTRUG00000007438dcaf137679.048ENSMEUG00000014697-8079.048Notamacropus_eugenii
ENSTRUG00000007438dcaf1310077.753ENSODEG00000000870DCAF1310077.753Octodon_degus
ENSTRUG00000007438dcaf1310088.315ENSONIG00000000142dcaf1310088.315Oreochromis_niloticus
ENSTRUG00000007438dcaf1310077.753ENSOCUG00000009197DCAF1310077.753Oryctolagus_cuniculus
ENSTRUG00000007438dcaf1310087.640ENSORLG00000002363dcaf1310087.640Oryzias_latipes
ENSTRUG00000007438dcaf1310088.090ENSORLG00020001143dcaf1310088.090Oryzias_latipes_hni
ENSTRUG00000007438dcaf1310087.865ENSORLG00015015911dcaf1310087.865Oryzias_latipes_hsok
ENSTRUG00000007438dcaf1310087.640ENSOMEG00000006040dcaf1310087.640Oryzias_melastigma
ENSTRUG00000007438dcaf139879.770ENSOGAG00000002277DCAF1310079.326Otolemur_garnettii
ENSTRUG00000007438dcaf1310077.978ENSOARG00000016227DCAF1310077.978Ovis_aries
ENSTRUG00000007438dcaf139877.471ENSPPAG00000029408DCAF137577.079Pan_paniscus
ENSTRUG00000007438dcaf1310078.202ENSPPRG00000005766DCAF1310078.202Panthera_pardus
ENSTRUG00000007438dcaf1310078.652ENSPTIG00000016790DCAF1310078.652Panthera_tigris_altaica
ENSTRUG00000007438dcaf139877.701ENSPTRG00000020493DCAF137577.303Pan_troglodytes
ENSTRUG00000007438dcaf1310075.506ENSPANG00000026479-10075.506Papio_anubis
ENSTRUG00000007438dcaf1310078.202ENSPANG00000010643-7778.202Papio_anubis
ENSTRUG00000007438dcaf1310082.022ENSPKIG00000017471dcaf1310082.022Paramormyrops_kingsleyae
ENSTRUG00000007438dcaf1310075.955ENSPSIG00000016768DCAF1310075.955Pelodiscus_sinensis
ENSTRUG00000007438dcaf1310083.146ENSPMGG00000022144dcaf1310083.146Periophthalmus_magnuspinnatus
ENSTRUG00000007438dcaf1310079.551ENSPEMG00000011958Dcaf1310079.551Peromyscus_maniculatus_bairdii
ENSTRUG00000007438dcaf1310077.753ENSPCIG00000026186DCAF1310077.753Phascolarctos_cinereus
ENSTRUG00000007438dcaf1310087.191ENSPFOG00000019444dcaf1310087.191Poecilia_formosa
ENSTRUG00000007438dcaf1310086.742ENSPLAG00000015924dcaf1310086.742Poecilia_latipinna
ENSTRUG00000007438dcaf1310087.191ENSPMEG00000004022dcaf1310087.191Poecilia_mexicana
ENSTRUG00000007438dcaf1310087.191ENSPREG00000016063dcaf1310087.191Poecilia_reticulata
ENSTRUG00000007438dcaf139877.701ENSPPYG00000018809-10077.303Pongo_abelii
ENSTRUG00000007438dcaf139873.793ENSPCAG00000007620DCAF137573.483Procavia_capensis
ENSTRUG00000007438dcaf139774.478ENSPCOG00000028064-10074.150Propithecus_coquereli
ENSTRUG00000007438dcaf1310077.978ENSPVAG00000017178DCAF137677.978Pteropus_vampyrus
ENSTRUG00000007438dcaf1310088.764ENSPNYG00000003861dcaf1310088.764Pundamilia_nyererei
ENSTRUG00000007438dcaf1310080.899ENSPNAG00000010091dcaf1310080.899Pygocentrus_nattereri
ENSTRUG00000007438dcaf1310078.427ENSRNOG00000004301Dcaf1310078.427Rattus_norvegicus
ENSTRUG00000007438dcaf1310078.202ENSRBIG00000032300DCAF138578.202Rhinopithecus_bieti
ENSTRUG00000007438dcaf1310077.978ENSRROG00000040442DCAF1310077.978Rhinopithecus_roxellana
ENSTRUG00000007438dcaf139953.288ENSRROG00000032221-9953.288Rhinopithecus_roxellana
ENSTRUG00000007438dcaf139945.182YLL011W-9545.182Saccharomyces_cerevisiae
ENSTRUG00000007438dcaf1310077.978ENSSBOG00000025597DCAF1310077.978Saimiri_boliviensis_boliviensis
ENSTRUG00000007438dcaf1310076.404ENSSHAG00000006588DCAF1310076.404Sarcophilus_harrisii
ENSTRUG00000007438dcaf1310083.146ENSSFOG00015006138dcaf1310083.146Scleropages_formosus
ENSTRUG00000007438dcaf1310087.865ENSSMAG00000009568dcaf1310087.865Scophthalmus_maximus
ENSTRUG00000007438dcaf1310087.640ENSSLDG00000010517dcaf1310087.640Seriola_lalandi_dorsalis
ENSTRUG00000007438dcaf1310079.775ENSSPUG00000009148DCAF1310079.775Sphenodon_punctatus
ENSTRUG00000007438dcaf1310087.865ENSSPAG00000019890dcaf1310087.865Stegastes_partitus
ENSTRUG00000007438dcaf1310076.404ENSSSCG00000006048DCAF1310076.404Sus_scrofa
ENSTRUG00000007438dcaf139579.384ENSTGUG00000012152DCAF1310079.384Taeniopygia_guttata
ENSTRUG00000007438dcaf139495.683ENSTNIG00000008215dcaf138495.683Tetraodon_nigroviridis
ENSTRUG00000007438dcaf135178.761ENSTBEG00000015812-5078.761Tupaia_belangeri
ENSTRUG00000007438dcaf139868.966ENSTTRG00000014906DCAF137568.539Tursiops_truncatus
ENSTRUG00000007438dcaf1310078.427ENSUAMG00000017931DCAF1310078.427Ursus_americanus
ENSTRUG00000007438dcaf139971.783ENSUMAG00000019830DCAF137671.783Ursus_maritimus
ENSTRUG00000007438dcaf1310077.978ENSVPAG00000006725DCAF137677.978Vicugna_pacos
ENSTRUG00000007438dcaf139478.897ENSVVUG00000016884DCAF138978.897Vulpes_vulpes
ENSTRUG00000007438dcaf138279.121ENSXETG00000004092dcaf1310079.121Xenopus_tropicalis
ENSTRUG00000007438dcaf1310081.798ENSXCOG00000017005dcaf1310081.798Xiphophorus_couchianus
ENSTRUG00000007438dcaf1310087.640ENSXMAG00000026809dcaf1310087.640Xiphophorus_maculatus

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