EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000007482 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif%2C single-stranded-interacting protein 3-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 134269 bases
Position: chr12:10350823-10485091
Accession: 101073751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000018536	RRM_1	PF00076.22	2.6e-23	1	2
ENSTRUP00000018536	RRM_1	PF00076.22	2.6e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000018612	-	1215	XM_011609498	ENSTRUP00000018536	404 (aa)	XP_011607800	H2T1J8

Gene Model

Click here to download ENSTRUG00000007482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000007482's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000007482	-	80	65.861	ENSTRUG00000005466	-	75	69.079
ENSTRUG00000007482	-	99	71.729	ENSTRUG00000021719	RBMS3	79	81.525
ENSTRUG00000007482	-	79	55.418	ENSTRUG00000017155	rbms1a	77	57.426
ENSTRUG00000007482	-	89	65.097	ENSTRUG00000006839	rbms2b	84	67.742
ENSTRUG00000007482	-	89	67.500	ENSTRUG00000008492	rbms2a	79	70.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000007482	-	99	78.723	ENSG00000144642	RBMS3	99	78.014	Homo_sapiens
ENSTRUG00000007482	-	99	68.627	ENSAPOG00000007266	rbms3	99	66.525	Acanthochromis_polyacanthus
ENSTRUG00000007482	-	100	86.874	ENSAPOG00000003432	-	100	86.698	Acanthochromis_polyacanthus
ENSTRUG00000007482	-	71	83.607	ENSAMEG00000005947	RBMS3	99	83.607	Ailuropoda_melanoleuca
ENSTRUG00000007482	-	89	69.252	ENSACIG00000021113	RBMS3	88	72.434	Amphilophus_citrinellus
ENSTRUG00000007482	-	71	93.031	ENSACIG00000006987	-	73	98.127	Amphilophus_citrinellus
ENSTRUG00000007482	-	89	93.352	ENSAOCG00000024104	-	100	80.000	Amphiprion_ocellaris
ENSTRUG00000007482	-	99	73.131	ENSAOCG00000021274	rbms3	85	96.000	Amphiprion_ocellaris
ENSTRUG00000007482	-	100	78.759	ENSAPEG00000009481	-	100	78.622	Amphiprion_percula
ENSTRUG00000007482	-	79	82.243	ENSAPEG00000016299	rbms3	79	86.047	Amphiprion_percula
ENSTRUG00000007482	-	99	73.474	ENSATEG00000024295	rbms3	99	71.789	Anabas_testudineus
ENSTRUG00000007482	-	100	86.635	ENSATEG00000008433	-	100	86.461	Anabas_testudineus
ENSTRUG00000007482	-	99	77.241	ENSAPLG00000012270	RBMS3	99	76.552	Anas_platyrhynchos
ENSTRUG00000007482	-	99	79.384	ENSACAG00000028664	RBMS3	99	78.436	Anolis_carolinensis
ENSTRUG00000007482	-	99	76.376	ENSANAG00000021899	RBMS3	99	75.917	Aotus_nancymaae
ENSTRUG00000007482	-	99	72.941	ENSACLG00000018506	rbms3	99	71.264	Astatotilapia_calliptera
ENSTRUG00000007482	-	89	92.244	ENSACLG00000008976	-	94	78.153	Astatotilapia_calliptera
ENSTRUG00000007482	-	60	72.201	ENSAMXG00000043770	-	100	72.414	Astyanax_mexicanus
ENSTRUG00000007482	-	99	79.567	ENSAMXG00000020388	rbms3	99	79.952	Astyanax_mexicanus
ENSTRUG00000007482	-	99	78.487	ENSBTAG00000044062	RBMS3	99	78.014	Bos_taurus
ENSTRUG00000007482	-	99	76.376	ENSCJAG00000004312	RBMS3	99	75.688	Callithrix_jacchus
ENSTRUG00000007482	-	99	76.037	ENSCAFG00000005464	RBMS3	99	75.399	Canis_familiaris
ENSTRUG00000007482	-	99	76.037	ENSCAFG00020024980	RBMS3	99	75.399	Canis_lupus_dingo
ENSTRUG00000007482	-	99	78.014	ENSCHIG00000009144	RBMS3	99	77.541	Capra_hircus
ENSTRUG00000007482	-	79	85.241	ENSTSYG00000002615	RBMS3	99	85.241	Carlito_syrichta
ENSTRUG00000007482	-	89	78.552	ENSCAPG00000017783	RBMS3	86	81.711	Cavia_aperea
ENSTRUG00000007482	-	99	79.187	ENSCPOG00000006457	RBMS3	99	79.524	Cavia_porcellus
ENSTRUG00000007482	-	99	76.376	ENSCCAG00000008671	RBMS3	99	75.688	Cebus_capucinus
ENSTRUG00000007482	-	100	76.082	ENSCATG00000013222	RBMS3	100	75.399	Cercocebus_atys
ENSTRUG00000007482	-	99	78.251	ENSCLAG00000005866	RBMS3	99	77.778	Chinchilla_lanigera
ENSTRUG00000007482	-	67	87.132	ENSCSAG00000009655	RBMS3	99	87.132	Chlorocebus_sabaeus
ENSTRUG00000007482	-	90	88.000	ENSCHOG00000000758	RBMS3	86	88.000	Choloepus_hoffmanni
ENSTRUG00000007482	-	99	79.384	ENSCPBG00000022678	RBMS3	98	80.789	Chrysemys_picta_bellii
ENSTRUG00000007482	-	99	76.147	ENSCANG00000032137	RBMS3	99	75.459	Colobus_angolensis_palliatus
ENSTRUG00000007482	-	99	76.794	ENSCGRG00001007243	Rbms3	99	77.143	Cricetulus_griseus_chok1gshd
ENSTRUG00000007482	-	99	76.794	ENSCGRG00000004599	Rbms3	99	77.143	Cricetulus_griseus_crigri
ENSTRUG00000007482	-	100	85.680	ENSCSEG00000014677	-	77	98.876	Cynoglossus_semilaevis
ENSTRUG00000007482	-	99	72.600	ENSCSEG00000010011	RBMS3	99	70.938	Cynoglossus_semilaevis
ENSTRUG00000007482	-	100	87.081	ENSCVAG00000022814	-	100	86.698	Cyprinodon_variegatus
ENSTRUG00000007482	-	99	74.704	ENSCVAG00000022354	rbms3	99	74.704	Cyprinodon_variegatus
ENSTRUG00000007482	-	99	79.808	ENSDARG00000044574	rbms3	99	80.191	Danio_rerio
ENSTRUG00000007482	-	99	78.251	ENSDNOG00000016645	RBMS3	99	74.715	Dasypus_novemcinctus
ENSTRUG00000007482	-	99	78.014	ENSDORG00000007220	Rbms3	99	77.541	Dipodomys_ordii
ENSTRUG00000007482	-	90	83.333	ENSETEG00000009485	-	80	70.286	Echinops_telfairi
ENSTRUG00000007482	-	61	51.190	ENSEBUG00000005830	rbms3	72	53.680	Eptatretus_burgeri
ENSTRUG00000007482	-	99	78.487	ENSEASG00005006152	RBMS3	99	77.778	Equus_asinus_asinus
ENSTRUG00000007482	-	99	78.487	ENSECAG00000017871	RBMS3	99	77.778	Equus_caballus
ENSTRUG00000007482	-	90	69.543	ENSEEUG00000014337	RBMS3	100	68.672	Erinaceus_europaeus
ENSTRUG00000007482	-	89	91.413	ENSELUG00000006905	-	89	95.308	Esox_lucius
ENSTRUG00000007482	-	99	70.118	ENSELUG00000002862	rbms3	86	80.000	Esox_lucius
ENSTRUG00000007482	-	99	78.251	ENSFCAG00000002130	RBMS3	99	77.778	Felis_catus
ENSTRUG00000007482	-	99	79.621	ENSFALG00000009165	RBMS3	99	78.673	Ficedula_albicollis
ENSTRUG00000007482	-	99	77.778	ENSFDAG00000008278	RBMS3	99	77.305	Fukomys_damarensis
ENSTRUG00000007482	-	89	70.718	ENSFHEG00000004787	RBMS3	87	73.392	Fundulus_heteroclitus
ENSTRUG00000007482	-	89	84.073	ENSGMOG00000002600	-	87	87.328	Gadus_morhua
ENSTRUG00000007482	-	99	79.621	ENSGALG00000011439	RBMS3	99	78.673	Gallus_gallus
ENSTRUG00000007482	-	100	87.112	ENSGAFG00000003329	-	100	86.936	Gambusia_affinis
ENSTRUG00000007482	-	99	74.292	ENSGAFG00000000168	rbms3	99	71.824	Gambusia_affinis
ENSTRUG00000007482	-	67	87.546	ENSGAGG00000004039	RBMS3	99	87.546	Gopherus_agassizii
ENSTRUG00000007482	-	99	76.376	ENSGGOG00000007228	RBMS3	99	75.688	Gorilla_gorilla
ENSTRUG00000007482	-	100	82.110	ENSHBUG00000019785	-	96	81.963	Haplochromis_burtoni
ENSTRUG00000007482	-	61	72.862	ENSHBUG00000021196	rbms3	94	69.534	Haplochromis_burtoni
ENSTRUG00000007482	-	99	78.251	ENSHGLG00000002170	RBMS3	99	77.778	Heterocephalus_glaber_female
ENSTRUG00000007482	-	99	78.251	ENSHGLG00100014278	RBMS3	99	77.778	Heterocephalus_glaber_male
ENSTRUG00000007482	-	100	85.919	ENSHCOG00000007894	-	100	85.511	Hippocampus_comes
ENSTRUG00000007482	-	99	79.808	ENSIPUG00000017680	rbms3	99	80.191	Ictalurus_punctatus
ENSTRUG00000007482	-	99	78.487	ENSSTOG00000006324	RBMS3	99	78.014	Ictidomys_tridecemlineatus
ENSTRUG00000007482	-	99	75.000	ENSJJAG00000014708	Rbms3	99	75.118	Jaculus_jaculus
ENSTRUG00000007482	-	100	86.396	ENSKMAG00000012586	-	100	86.223	Kryptolebias_marmoratus
ENSTRUG00000007482	-	99	72.494	ENSKMAG00000020500	rbms3	85	96.000	Kryptolebias_marmoratus
ENSTRUG00000007482	-	63	74.436	ENSLBEG00000006677	rbms3	97	74.436	Labrus_bergylta
ENSTRUG00000007482	-	100	86.158	ENSLBEG00000027388	-	100	85.986	Labrus_bergylta
ENSTRUG00000007482	-	99	81.473	ENSLACG00000010581	RBMS3	99	81.473	Latimeria_chalumnae
ENSTRUG00000007482	-	72	90.378	ENSLOCG00000002328	rbms3	99	90.378	Lepisosteus_oculatus
ENSTRUG00000007482	-	99	75.806	ENSLAFG00000000354	RBMS3	99	75.171	Loxodonta_africana
ENSTRUG00000007482	-	99	78.487	ENSMFAG00000033300	RBMS3	99	77.778	Macaca_fascicularis
ENSTRUG00000007482	-	99	78.487	ENSMMUG00000004404	RBMS3	99	77.778	Macaca_mulatta
ENSTRUG00000007482	-	99	76.147	ENSMNEG00000035839	RBMS3	99	75.459	Macaca_nemestrina
ENSTRUG00000007482	-	100	76.082	ENSMLEG00000029464	RBMS3	100	75.399	Mandrillus_leucophaeus
ENSTRUG00000007482	-	89	93.352	ENSMAMG00000002176	-	76	97.361	Mastacembelus_armatus
ENSTRUG00000007482	-	99	73.770	ENSMAMG00000024043	rbms3	99	72.082	Mastacembelus_armatus
ENSTRUG00000007482	-	99	72.941	ENSMZEG00005006308	rbms3	99	71.264	Maylandia_zebra
ENSTRUG00000007482	-	100	83.178	ENSMZEG00005026469	-	96	83.333	Maylandia_zebra
ENSTRUG00000007482	-	99	76.794	ENSMAUG00000016436	Rbms3	99	77.143	Mesocricetus_auratus
ENSTRUG00000007482	-	99	76.376	ENSMICG00000049249	RBMS3	99	75.688	Microcebus_murinus
ENSTRUG00000007482	-	99	76.683	ENSMOCG00000006997	Rbms3	99	76.555	Microtus_ochrogaster
ENSTRUG00000007482	-	79	82.243	ENSMMOG00000008471	RBMS3	81	86.711	Mola_mola
ENSTRUG00000007482	-	100	85.442	ENSMMOG00000015071	-	100	85.273	Mola_mola
ENSTRUG00000007482	-	99	75.621	ENSMODG00000015125	RBMS3	99	75.169	Monodelphis_domestica
ENSTRUG00000007482	-	99	73.474	ENSMALG00000019536	RBMS3	99	71.789	Monopterus_albus
ENSTRUG00000007482	-	100	86.635	ENSMALG00000009155	-	100	86.461	Monopterus_albus
ENSTRUG00000007482	-	99	75.540	MGP_CAROLIEiJ_G0032783	Rbms3	99	75.714	Mus_caroli
ENSTRUG00000007482	-	99	76.077	ENSMUSG00000039607	Rbms3	99	76.429	Mus_musculus
ENSTRUG00000007482	-	99	75.895	MGP_PahariEiJ_G0015650	Rbms3	99	76.247	Mus_pahari
ENSTRUG00000007482	-	99	76.077	MGP_SPRETEiJ_G0033930	Rbms3	99	76.429	Mus_spretus
ENSTRUG00000007482	-	99	76.037	ENSMPUG00000011956	RBMS3	99	75.399	Mustela_putorius_furo
ENSTRUG00000007482	-	99	78.487	ENSMLUG00000000659	RBMS3	99	78.014	Myotis_lucifugus
ENSTRUG00000007482	-	89	84.722	ENSNGAG00000014039	Rbms3	99	78.810	Nannospalax_galili
ENSTRUG00000007482	-	100	85.680	ENSNBRG00000018065	-	100	85.511	Neolamprologus_brichardi
ENSTRUG00000007482	-	99	76.376	ENSNLEG00000004129	RBMS3	99	75.688	Nomascus_leucogenys
ENSTRUG00000007482	-	99	70.000	ENSMEUG00000004772	RBMS3	99	70.136	Notamacropus_eugenii
ENSTRUG00000007482	-	99	76.037	ENSOPRG00000006808	RBMS3	85	75.346	Ochotona_princeps
ENSTRUG00000007482	-	99	78.436	ENSODEG00000003651	RBMS3	99	78.014	Octodon_degus
ENSTRUG00000007482	-	89	79.224	ENSONIG00000007172	rbms3	99	66.051	Oreochromis_niloticus
ENSTRUG00000007482	-	99	76.959	ENSOANG00000010529	RBMS3	99	76.267	Ornithorhynchus_anatinus
ENSTRUG00000007482	-	99	75.346	ENSOCUG00000004840	RBMS3	99	74.487	Oryctolagus_cuniculus
ENSTRUG00000007482	-	100	85.919	ENSORLG00000002306	-	100	85.748	Oryzias_latipes
ENSTRUG00000007482	-	99	72.340	ENSORLG00000005370	RBMS3	99	71.868	Oryzias_latipes
ENSTRUG00000007482	-	100	86.158	ENSORLG00020008496	-	100	85.986	Oryzias_latipes_hni
ENSTRUG00000007482	-	99	72.104	ENSORLG00020022674	RBMS3	99	71.631	Oryzias_latipes_hni
ENSTRUG00000007482	-	99	72.577	ENSORLG00015005509	rbms3	99	72.104	Oryzias_latipes_hsok
ENSTRUG00000007482	-	100	86.158	ENSORLG00015015719	-	100	85.986	Oryzias_latipes_hsok
ENSTRUG00000007482	-	99	72.577	ENSOMEG00000014805	RBMS3	99	72.340	Oryzias_melastigma
ENSTRUG00000007482	-	89	92.244	ENSOMEG00000007677	-	89	96.188	Oryzias_melastigma
ENSTRUG00000007482	-	99	75.171	ENSOARG00000014684	RBMS3	99	74.715	Ovis_aries
ENSTRUG00000007482	-	99	76.376	ENSPPAG00000036519	RBMS3	99	75.688	Pan_paniscus
ENSTRUG00000007482	-	99	75.917	ENSPPRG00000002761	RBMS3	99	75.459	Panthera_pardus
ENSTRUG00000007482	-	99	78.251	ENSPTIG00000011568	RBMS3	99	77.778	Panthera_tigris_altaica
ENSTRUG00000007482	-	99	78.723	ENSPTRG00000014709	RBMS3	99	78.014	Pan_troglodytes
ENSTRUG00000007482	-	100	76.082	ENSPANG00000010234	RBMS3	100	75.399	Papio_anubis
ENSTRUG00000007482	-	60	77.220	ENSPKIG00000007989	-	100	75.676	Paramormyrops_kingsleyae
ENSTRUG00000007482	-	99	78.673	ENSPSIG00000005269	RBMS3	99	77.725	Pelodiscus_sinensis
ENSTRUG00000007482	-	89	92.798	ENSPMGG00000021683	-	89	96.774	Periophthalmus_magnuspinnatus
ENSTRUG00000007482	-	79	80.997	ENSPMGG00000021544	rbms3	78	84.667	Periophthalmus_magnuspinnatus
ENSTRUG00000007482	-	99	73.861	ENSPEMG00000001117	Rbms3	99	74.224	Peromyscus_maniculatus_bairdii
ENSTRUG00000007482	-	82	78.977	ENSPCIG00000006106	RBMS3	87	78.409	Phascolarctos_cinereus
ENSTRUG00000007482	-	99	74.528	ENSPFOG00000017887	rbms3	99	72.055	Poecilia_formosa
ENSTRUG00000007482	-	79	80.805	ENSPLAG00000016866	-	82	80.805	Poecilia_latipinna
ENSTRUG00000007482	-	100	86.874	ENSPMEG00000002993	-	100	86.698	Poecilia_mexicana
ENSTRUG00000007482	-	89	93.629	ENSPREG00000018221	-	97	78.824	Poecilia_reticulata
ENSTRUG00000007482	-	100	74.353	ENSPREG00000011880	rbms3	100	72.120	Poecilia_reticulata
ENSTRUG00000007482	-	99	62.903	ENSPPYG00000014050	RBMS3	82	62.187	Pongo_abelii
ENSTRUG00000007482	-	99	57.895	ENSPCAG00000006307	RBMS3	99	57.895	Procavia_capensis
ENSTRUG00000007482	-	99	76.606	ENSPCOG00000017136	RBMS3	99	75.917	Propithecus_coquereli
ENSTRUG00000007482	-	91	88.000	ENSPVAG00000014037	RBMS3	86	88.000	Pteropus_vampyrus
ENSTRUG00000007482	-	99	72.706	ENSPNYG00000010546	rbms3	99	71.034	Pundamilia_nyererei
ENSTRUG00000007482	-	100	85.919	ENSPNYG00000012624	-	100	85.748	Pundamilia_nyererei
ENSTRUG00000007482	-	99	79.327	ENSPNAG00000001800	rbms3	99	79.714	Pygocentrus_nattereri
ENSTRUG00000007482	-	89	82.778	ENSRNOG00000025881	Rbms3	99	77.143	Rattus_norvegicus
ENSTRUG00000007482	-	99	75.917	ENSRBIG00000035863	RBMS3	99	75.229	Rhinopithecus_bieti
ENSTRUG00000007482	-	89	82.306	ENSRROG00000027512	RBMS3	85	85.552	Rhinopithecus_roxellana
ENSTRUG00000007482	-	99	76.376	ENSSBOG00000020232	RBMS3	99	75.688	Saimiri_boliviensis_boliviensis
ENSTRUG00000007482	-	89	79.444	ENSSHAG00000002411	RBMS3	85	82.647	Sarcophilus_harrisii
ENSTRUG00000007482	-	100	82.339	ENSSFOG00015008578	rbms3	100	82.423	Scleropages_formosus
ENSTRUG00000007482	-	99	70.794	ENSSMAG00000004997	rbms3	92	81.525	Scophthalmus_maximus
ENSTRUG00000007482	-	97	81.728	ENSSMAG00000020065	-	97	81.572	Scophthalmus_maximus
ENSTRUG00000007482	-	100	86.874	ENSSDUG00000019287	-	100	86.698	Seriola_dumerili
ENSTRUG00000007482	-	99	73.598	ENSSDUG00000013656	RBMS3	81	83.871	Seriola_dumerili
ENSTRUG00000007482	-	99	73.318	ENSSLDG00000020276	RBMS3	84	96.000	Seriola_lalandi_dorsalis
ENSTRUG00000007482	-	100	86.874	ENSSLDG00000013224	-	100	86.698	Seriola_lalandi_dorsalis
ENSTRUG00000007482	-	79	69.345	ENSSARG00000000695	RBMS3	85	72.152	Sorex_araneus
ENSTRUG00000007482	-	73	85.714	ENSSPUG00000017197	RBMS3	97	85.714	Sphenodon_punctatus
ENSTRUG00000007482	-	99	72.897	ENSSPAG00000020693	rbms3	85	96.000	Stegastes_partitus
ENSTRUG00000007482	-	89	93.352	ENSSPAG00000003983	-	100	78.864	Stegastes_partitus
ENSTRUG00000007482	-	99	78.251	ENSSSCG00000036381	RBMS3	99	77.778	Sus_scrofa
ENSTRUG00000007482	-	79	86.061	ENSTGUG00000003572	RBMS3	99	85.075	Taeniopygia_guttata
ENSTRUG00000007482	-	79	83.333	ENSTBEG00000005362	RBMS3	85	87.025	Tupaia_belangeri
ENSTRUG00000007482	-	99	75.346	ENSTTRG00000006202	RBMS3	99	74.715	Tursiops_truncatus
ENSTRUG00000007482	-	99	76.037	ENSUMAG00000000263	RBMS3	99	75.399	Ursus_maritimus
ENSTRUG00000007482	-	89	71.011	ENSVPAG00000003842	RBMS3	85	73.596	Vicugna_pacos
ENSTRUG00000007482	-	89	82.480	ENSVVUG00000004660	RBMS3	78	93.956	Vulpes_vulpes
ENSTRUG00000007482	-	72	81.250	ENSXETG00000032055	RBMS3	98	81.250	Xenopus_tropicalis
ENSTRUG00000007482	-	79	85.583	ENSXCOG00000019600	-	88	85.583	Xiphophorus_couchianus
ENSTRUG00000007482	-	100	87.112	ENSXMAG00000014382	-	100	86.936	Xiphophorus_maculatus
ENSTRUG00000007482	-	99	74.118	ENSXMAG00000021783	rbms3	99	71.659	Xiphophorus_maculatus