EuRBPDB

Description
Ensembl ID
ENSTRUG00000007556 (Gene tree)
Gene ID
101073559
Gene Symbol
rab11al
Alias
fc54g10|wu:fc54g10|zgc:63565
Full Name
ras-related protein Rab-11A-like
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Plus strand
Length
5271 bases
Position
chrHE591655.1:280597-285867
Accession
101073559
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSTRUP00000046779MMR_HSR1PF01926.231.6e-0711
ENSTRUP00000018721MMR_HSR1PF01926.233.7e-0711
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSTRUT00000018799-648XM_003977101ENSTRUP00000018721215 (aa)XP_003977150H2T233
ENSTRUT00000046937-465-ENSTRUP00000046779154 (aa)-H2VC36
Gene Model
Pathways
Pathway ID
Pathway Name
Source
tru04144EndocytosisKEGG
Protein-Protein Interaction (PPI)
Paralogs
Ensembl ID
Gene Symbol
Coverage
Identiy
Paralog
Gene Symbol
Coverage
Identiy
ENSTRUG00000007556rab11al9237.931ENSTRUG00000008698rab9a8338.690
ENSTRUG00000007556rab11al7935.537ENSTRUG00000015697rab238035.366
ENSTRUG00000007556rab11al9046.429ENSTRUG00000004283rab18b7944.444
ENSTRUG00000007556rab11al9053.237ENSTRUG00000004287rab1ba9945.411
ENSTRUG00000007556rab11al9648.309ENSTRUG00000024994RAB1A9948.309
ENSTRUG00000007556rab11al7530.579ENSTRUG00000024375-5930.081
ENSTRUG00000007556rab11al9543.415ENSTRUG00000024177rab139843.415
ENSTRUG00000007556rab11al8842.963ENSTRUG00000024455rab128435.922
ENSTRUG00000007556rab11al7832.231ENSTRUG00000023449kras8535.802
ENSTRUG00000007556rab11al9037.931ENSTRUG00000020093-7839.264
ENSTRUG00000007556rab11al9591.781ENSTRUG00000021614-9982.407
ENSTRUG00000007556rab11al9590.411ENSTRUG00000021619-9981.308
ENSTRUG00000007556rab11al9543.396ENSTRUG00000025018rab39bb9743.396
ENSTRUG00000007556rab11al7949.587ENSTRUG00000017824rab157545.283
ENSTRUG00000007556rab11al7536.207ENSTRUG00000012454rabl26933.758
ENSTRUG00000007556rab11al9037.410ENSTRUG00000009223rab419231.683
ENSTRUG00000007556rab11al8637.594ENSTRUG00000004881rab6bb9134.392
ENSTRUG00000007556rab11al9253.147ENSTRUG00000011399-7753.012
ENSTRUG00000007556rab11al8741.791ENSTRUG00000018380rab22a7940.909
ENSTRUG00000007556rab11al7331.013ENSTRUG00000005805mras8132.941
ENSTRUG00000007556rab11al9253.846ENSTRUG00000003363rab2a8356.051
ENSTRUG00000007556rab11al9051.079ENSTRUG00000015590rab5c7149.682
ENSTRUG00000007556rab11al8841.606ENSTRUG00000007036rab33ba6241.333
ENSTRUG00000007556rab11al8632.867ENSTRUG00000008651rasl11a6631.792
ENSTRUG00000007556rab11al7539.316ENSTRUG00000010393-6234.591
ENSTRUG00000007556rab11al9050.000ENSTRUG00000020633rab35b10041.667
ENSTRUG00000007556rab11al7833.884ENSTRUG00000024825hrasb8537.037
ENSTRUG00000007556rab11al8632.836ENSTRUG00000004902rheb8732.919
ENSTRUG00000007556rab11al8930.612ENSTRUG00000013749ran8530.612
ENSTRUG00000007556rab11al9042.446ENSTRUG00000014783RAB157342.581
ENSTRUG00000007556rab11al9446.939ENSTRUG00000004984rab18a8244.970
ENSTRUG00000007556rab11al9039.726ENSTRUG00000009903zgc:1015597438.506
ENSTRUG00000007556rab11al9591.096ENSTRUG00000022029rab11bb9980.930
ENSTRUG00000007556rab11al9048.921ENSTRUG00000024368rab5aa7348.408
ENSTRUG00000007556rab11al9570.748ENSTRUG00000007504rab25b9958.411
ENSTRUG00000007556rab11al8533.333ENSTRUG00000023011rerg8630.682
ENSTRUG00000007556rab11al9233.333ENSTRUG00000022951rab205033.333
ENSTRUG00000007556rab11al9037.931ENSTRUG00000010082RAB7A7839.264
ENSTRUG00000007556rab11al8839.568ENSTRUG00000013963RAB9A8339.157
ENSTRUG00000007556rab11al8951.825ENSTRUG00000023164rab1ab9845.631
ENSTRUG00000007556rab11al9472.222ENSTRUG00000014595-10062.326
ENSTRUG00000007556rab11al9593.151ENSTRUG00000020792rab11a9985.446
ENSTRUG00000007556rab11al9036.691ENSTRUG00000023252rab6a9333.663
ENSTRUG00000007556rab11al9648.322ENSTRUG00000022559rab309243.158
ENSTRUG00000007556rab11al9047.101ENSTRUG00000025076si:dkey-16l2.169248.276
ENSTRUG00000007556rab11al9039.161ENSTRUG00000020335rab33a6239.375
ENSTRUG00000007556rab11al7538.655ENSTRUG00000005937rab34a5338.655
ENSTRUG00000007556rab11al9045.000ENSTRUG00000010224rab42a8442.077
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSTRUG00000007556rab11al9993.925ENSAPOG00000008251rab11al9993.925Acanthochromis_polyacanthus
ENSTRUG00000007556rab11al9995.327ENSACIG00000017403rab11al9995.327Amphilophus_citrinellus
ENSTRUG00000007556rab11al9995.794ENSAOCG00000015678rab11al9995.794Amphiprion_ocellaris
ENSTRUG00000007556rab11al9995.794ENSAPEG00000022135rab11al9995.794Amphiprion_percula
ENSTRUG00000007556rab11al9993.925ENSATEG00000006156rab11al9993.925Anabas_testudineus
ENSTRUG00000007556rab11al9995.794ENSACLG00000010268rab11al9995.794Astatotilapia_calliptera
ENSTRUG00000007556rab11al8891.176ENSAMXG00000024632rab11al9383.744Astyanax_mexicanus
ENSTRUG00000007556rab11al8891.111ENSCPBG00000025819-9979.208Chrysemys_picta_bellii
ENSTRUG00000007556rab11al9994.393ENSCSEG00000011996rab11al9994.393Cynoglossus_semilaevis
ENSTRUG00000007556rab11al9992.488ENSCVAG00000020016rab11al9992.488Cyprinodon_variegatus
ENSTRUG00000007556rab11al9297.872ENSDARG00000014340rab11al9990.141Danio_rerio
ENSTRUG00000007556rab11al9991.589ENSELUG00000012035rab11al9991.589Esox_lucius
ENSTRUG00000007556rab11al9490.345ENSFALG00000002594-9080.660Ficedula_albicollis
ENSTRUG00000007556rab11al9592.683ENSFHEG00000000832rab11al9892.683Fundulus_heteroclitus
ENSTRUG00000007556rab11al9487.129ENSGMOG00000006450rab11al10087.129Gadus_morhua
ENSTRUG00000007556rab11al9992.488ENSGAFG00000021725rab11al9992.488Gambusia_affinis
ENSTRUG00000007556rab11al9995.327ENSGACG00000013259rab11al9995.327Gasterosteus_aculeatus
ENSTRUG00000007556rab11al9491.034ENSGAGG00000020702-9880.189Gopherus_agassizii
ENSTRUG00000007556rab11al9995.794ENSHBUG00000009333rab11al9995.794Haplochromis_burtoni
ENSTRUG00000007556rab11al9994.836ENSHCOG00000000232rab11al9994.836Hippocampus_comes
ENSTRUG00000007556rab11al9990.141ENSIPUG00000006091RAB11A9990.141Ictalurus_punctatus
ENSTRUG00000007556rab11al9295.775ENSKMAG00000015516rab11al9988.318Kryptolebias_marmoratus
ENSTRUG00000007556rab11al9993.925ENSLBEG00000016417rab11al9993.925Labrus_bergylta
ENSTRUG00000007556rab11al9292.908ENSLACG00000011380rab11al9880.282Latimeria_chalumnae
ENSTRUG00000007556rab11al9992.523ENSLOCG00000008865rab11al9992.523Lepisosteus_oculatus
ENSTRUG00000007556rab11al9994.836ENSMAMG00000010278rab11al9994.836Mastacembelus_armatus
ENSTRUG00000007556rab11al9995.794ENSMZEG00005017514rab11al9995.794Maylandia_zebra
ENSTRUG00000007556rab11al9089.855ENSMGAG00000004720-9589.441Meleagris_gallopavo
ENSTRUG00000007556rab11al9297.872ENSMMOG00000017117rab11al8296.429Mola_mola
ENSTRUG00000007556rab11al9992.991ENSMALG00000004093rab11al9992.991Monopterus_albus
ENSTRUG00000007556rab11al9995.327ENSNBRG00000005116rab11al9995.327Neolamprologus_brichardi
ENSTRUG00000007556rab11al9995.327ENSONIG00000002281rab11al9995.327Oreochromis_niloticus
ENSTRUG00000007556rab11al9994.860ENSORLG00000016126rab11al9994.860Oryzias_latipes
ENSTRUG00000007556rab11al9994.860ENSORLG00020013747rab11al9994.860Oryzias_latipes_hni
ENSTRUG00000007556rab11al9994.860ENSORLG00015019591rab11al9994.860Oryzias_latipes_hsok
ENSTRUG00000007556rab11al9993.925ENSOMEG00000020271rab11al9993.925Oryzias_melastigma
ENSTRUG00000007556rab11al9296.479ENSPKIG00000020893rab11al9989.252Paramormyrops_kingsleyae
ENSTRUG00000007556rab11al9490.345ENSPSIG00000013143-9878.774Pelodiscus_sinensis
ENSTRUG00000007556rab11al9989.671ENSPMGG00000004220rab11al9989.671Periophthalmus_magnuspinnatus
ENSTRUG00000007556rab11al9991.549ENSPFOG00000011316rab11al9991.549Poecilia_formosa
ENSTRUG00000007556rab11al9991.549ENSPLAG00000007986rab11al9991.549Poecilia_latipinna
ENSTRUG00000007556rab11al9991.549ENSPMEG00000000804rab11al9991.549Poecilia_mexicana
ENSTRUG00000007556rab11al9991.549ENSPREG00000017324rab11al9991.549Poecilia_reticulata
ENSTRUG00000007556rab11al9995.794ENSPNYG00000018244rab11al9995.794Pundamilia_nyererei
ENSTRUG00000007556rab11al9991.080ENSPNAG00000029085rab11al9991.080Pygocentrus_nattereri
ENSTRUG00000007556rab11al9990.187ENSSFOG00015008618rab11al9990.187Scleropages_formosus
ENSTRUG00000007556rab11al9994.860ENSSMAG00000016206rab11al9994.860Scophthalmus_maximus
ENSTRUG00000007556rab11al9995.327ENSSDUG00000006278rab11al9995.327Seriola_dumerili
ENSTRUG00000007556rab11al9995.327ENSSLDG00000012116rab11al9995.327Seriola_lalandi_dorsalis
ENSTRUG00000007556rab11al9488.276ENSSPUG00000002526-9878.302Sphenodon_punctatus
ENSTRUG00000007556rab11al9995.327ENSSPAG00000012044rab11al9995.327Stegastes_partitus
ENSTRUG00000007556rab11al8892.593ENSTGUG00000003680-9982.673Taeniopygia_guttata
ENSTRUG00000007556rab11al9991.549ENSXCOG00000004226rab11al9991.549Xiphophorus_couchianus
ENSTRUG00000007556rab11al9991.549ENSXMAG00000027071rab11al9991.549Xiphophorus_maculatus