EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000007611 (Gene tree)
Gene ID: -
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 5081 bases
Position: chrHE591780.1:202573-207653
Accession: 101063699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000018878	DUF382	PF04037.13	1.1e-58	1	1
ENSTRUP00000018879	DUF382	PF04037.13	1.1e-58	1	1
ENSTRUP00000018877	DUF382	PF04037.13	1.2e-58	1	1
ENSTRUP00000018876	DUF382	PF04037.13	1.2e-58	1	1
ENSTRUP00000051535	DUF382	PF04037.13	1.4e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000018955	-	2103	-	ENSTRUP00000018877	700 (aa)	-	H2T2I9
ENSTRUT00000018956	-	2037	-	ENSTRUP00000018878	678 (aa)	-	H2T2J0
ENSTRUT00000018954	-	2187	-	ENSTRUP00000018876	728 (aa)	-	H2T2I8
ENSTRUT00000051163	-	2319	XM_011619349	ENSTRUP00000051535	772 (aa)	XP_011617651	-
ENSTRUT00000018957	-	2046	-	ENSTRUP00000018879	681 (aa)	-	H2T2J1

Gene Model

Click here to download ENSTRUG00000007611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000007611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000007611	sf3b2	88	71.763	ENSG00000087365	SF3B2	99	78.261	Homo_sapiens
ENSTRUG00000007611	sf3b2	94	81.132	ENSAPOG00000001974	sf3b2	96	67.060	Acanthochromis_polyacanthus
ENSTRUG00000007611	sf3b2	88	71.651	ENSAMEG00000017206	SF3B2	87	63.764	Ailuropoda_melanoleuca
ENSTRUG00000007611	sf3b2	99	80.371	ENSACIG00000000624	sf3b2	100	67.044	Amphilophus_citrinellus
ENSTRUG00000007611	sf3b2	99	83.019	ENSAOCG00000009207	sf3b2	100	67.959	Amphiprion_ocellaris
ENSTRUG00000007611	sf3b2	99	83.019	ENSAPEG00000002762	sf3b2	100	68.397	Amphiprion_percula
ENSTRUG00000007611	sf3b2	99	53.761	ENSACAG00000008615	SF3B2	76	98.684	Anolis_carolinensis
ENSTRUG00000007611	sf3b2	88	71.763	ENSANAG00000029120	SF3B2	97	56.073	Aotus_nancymaae
ENSTRUG00000007611	sf3b2	99	80.645	ENSACLG00000014771	sf3b2	91	80.645	Astatotilapia_calliptera
ENSTRUG00000007611	sf3b2	93	76.935	ENSAMXG00000007929	sf3b2	99	73.684	Astyanax_mexicanus
ENSTRUG00000007611	sf3b2	88	71.919	ENSBTAG00000002778	SF3B2	86	63.718	Bos_taurus
ENSTRUG00000007611	sf3b2	79	42.361	WBGene00021004	sftb-2	92	42.059	Caenorhabditis_elegans
ENSTRUG00000007611	sf3b2	88	71.763	ENSCJAG00000001656	SF3B2	97	56.073	Callithrix_jacchus
ENSTRUG00000007611	sf3b2	88	71.607	ENSCAFG00000013033	SF3B2	87	63.846	Canis_familiaris
ENSTRUG00000007611	sf3b2	88	71.607	ENSCAFG00020015382	SF3B2	87	63.846	Canis_lupus_dingo
ENSTRUG00000007611	sf3b2	88	71.919	ENSCHIG00000011211	SF3B2	87	63.718	Capra_hircus
ENSTRUG00000007611	sf3b2	94	65.503	ENSTSYG00000000959	SF3B2	97	56.442	Carlito_syrichta
ENSTRUG00000007611	sf3b2	78	59.347	ENSCAPG00000006065	SF3B2	68	73.522	Cavia_aperea
ENSTRUG00000007611	sf3b2	76	69.510	ENSCPOG00000008294	SF3B2	93	52.964	Cavia_porcellus
ENSTRUG00000007611	sf3b2	88	71.763	ENSCCAG00000035256	SF3B2	97	56.073	Cebus_capucinus
ENSTRUG00000007611	sf3b2	88	71.763	ENSCATG00000042240	SF3B2	97	58.080	Cercocebus_atys
ENSTRUG00000007611	sf3b2	88	72.231	ENSCLAG00000016852	SF3B2	97	54.566	Chinchilla_lanigera
ENSTRUG00000007611	sf3b2	88	71.763	ENSCSAG00000008121	SF3B2	97	56.328	Chlorocebus_sabaeus
ENSTRUG00000007611	sf3b2	77	89.286	ENSCHOG00000001476	SF3B2	89	69.072	Choloepus_hoffmanni
ENSTRUG00000007611	sf3b2	99	67.684	ENSCPBG00000022465	SF3B2	99	67.671	Chrysemys_picta_bellii
ENSTRUG00000007611	sf3b2	88	56.320	ENSCING00000005665	-	98	55.859	Ciona_intestinalis
ENSTRUG00000007611	sf3b2	78	59.515	ENSCSAVG00000002029	-	99	54.140	Ciona_savignyi
ENSTRUG00000007611	sf3b2	88	71.763	ENSCANG00000039680	SF3B2	97	56.328	Colobus_angolensis_palliatus
ENSTRUG00000007611	sf3b2	88	71.763	ENSCGRG00001015741	Sf3b2	97	54.566	Cricetulus_griseus_chok1gshd
ENSTRUG00000007611	sf3b2	88	71.763	ENSCGRG00000018110	Sf3b2	89	64.605	Cricetulus_griseus_crigri
ENSTRUG00000007611	sf3b2	95	71.977	ENSCSEG00000000230	sf3b2	100	65.130	Cynoglossus_semilaevis
ENSTRUG00000007611	sf3b2	95	75.068	ENSCVAG00000003357	sf3b2	100	64.220	Cyprinodon_variegatus
ENSTRUG00000007611	sf3b2	95	73.621	ENSDARG00000018049	sf3b2	99	60.592	Danio_rerio
ENSTRUG00000007611	sf3b2	88	71.763	ENSDNOG00000009484	SF3B2	95	64.660	Dasypus_novemcinctus
ENSTRUG00000007611	sf3b2	88	71.900	ENSDORG00000002495	Sf3b2	97	54.432	Dipodomys_ordii
ENSTRUG00000007611	sf3b2	61	89.944	ENSETEG00000020284	SF3B2	58	90.164	Echinops_telfairi
ENSTRUG00000007611	sf3b2	94	56.878	ENSEBUG00000013703	sf3b2	85	54.377	Eptatretus_burgeri
ENSTRUG00000007611	sf3b2	88	71.763	ENSEASG00005004508	SF3B2	97	56.300	Equus_asinus_asinus
ENSTRUG00000007611	sf3b2	88	71.763	ENSECAG00000024461	SF3B2	97	56.300	Equus_caballus
ENSTRUG00000007611	sf3b2	60	84.746	ENSEEUG00000014278	-	53	84.746	Erinaceus_europaeus
ENSTRUG00000007611	sf3b2	97	76.516	ENSELUG00000005586	sf3b2	100	62.336	Esox_lucius
ENSTRUG00000007611	sf3b2	94	65.857	ENSFCAG00000013289	SF3B2	97	54.835	Felis_catus
ENSTRUG00000007611	sf3b2	92	58.655	ENSFALG00000014653	SF3B2	91	61.381	Ficedula_albicollis
ENSTRUG00000007611	sf3b2	88	71.851	ENSFDAG00000019806	SF3B2	97	56.122	Fukomys_damarensis
ENSTRUG00000007611	sf3b2	95	73.414	ENSFHEG00000020968	sf3b2	87	78.261	Fundulus_heteroclitus
ENSTRUG00000007611	sf3b2	90	77.031	ENSGMOG00000012131	sf3b2	98	77.174	Gadus_morhua
ENSTRUG00000007611	sf3b2	91	85.929	ENSGAFG00000001675	sf3b2	100	64.553	Gambusia_affinis
ENSTRUG00000007611	sf3b2	90	76.043	ENSGACG00000019012	sf3b2	98	77.469	Gasterosteus_aculeatus
ENSTRUG00000007611	sf3b2	99	62.720	ENSGAGG00000023916	SF3B2	98	58.276	Gopherus_agassizii
ENSTRUG00000007611	sf3b2	88	71.763	ENSGGOG00000028448	SF3B2	97	70.538	Gorilla_gorilla
ENSTRUG00000007611	sf3b2	99	80.645	ENSHBUG00000017349	sf3b2	91	80.645	Haplochromis_burtoni
ENSTRUG00000007611	sf3b2	88	72.370	ENSHGLG00000010807	SF3B2	97	54.680	Heterocephalus_glaber_female
ENSTRUG00000007611	sf3b2	88	72.370	ENSHGLG00100006361	SF3B2	97	56.214	Heterocephalus_glaber_male
ENSTRUG00000007611	sf3b2	99	70.142	ENSHCOG00000016203	sf3b2	100	63.837	Hippocampus_comes
ENSTRUG00000007611	sf3b2	97	71.614	ENSIPUG00000009383	sf3b2	100	61.996	Ictalurus_punctatus
ENSTRUG00000007611	sf3b2	88	71.607	ENSSTOG00000028892	SF3B2	97	56.328	Ictidomys_tridecemlineatus
ENSTRUG00000007611	sf3b2	88	71.763	ENSJJAG00000018193	Sf3b2	97	54.432	Jaculus_jaculus
ENSTRUG00000007611	sf3b2	83	83.114	ENSKMAG00000020181	sf3b2	100	64.294	Kryptolebias_marmoratus
ENSTRUG00000007611	sf3b2	97	79.005	ENSLBEG00000027739	sf3b2	98	73.219	Labrus_bergylta
ENSTRUG00000007611	sf3b2	89	72.344	ENSLACG00000010429	SF3B2	100	54.723	Latimeria_chalumnae
ENSTRUG00000007611	sf3b2	88	71.743	ENSLAFG00000002128	SF3B2	86	64.868	Loxodonta_africana
ENSTRUG00000007611	sf3b2	88	71.651	ENSMFAG00000003064	SF3B2	97	58.012	Macaca_fascicularis
ENSTRUG00000007611	sf3b2	94	61.465	ENSMMUG00000011743	SF3B2	97	52.692	Macaca_mulatta
ENSTRUG00000007611	sf3b2	88	71.763	ENSMNEG00000034437	SF3B2	97	58.080	Macaca_nemestrina
ENSTRUG00000007611	sf3b2	88	71.763	ENSMLEG00000029373	SF3B2	97	57.791	Mandrillus_leucophaeus
ENSTRUG00000007611	sf3b2	96	72.360	ENSMAMG00000014103	sf3b2	100	68.290	Mastacembelus_armatus
ENSTRUG00000007611	sf3b2	99	80.645	ENSMZEG00005020789	sf3b2	90	80.645	Maylandia_zebra
ENSTRUG00000007611	sf3b2	53	78.202	ENSMAUG00000017040	Sf3b2	65	78.202	Mesocricetus_auratus
ENSTRUG00000007611	sf3b2	94	65.995	ENSMICG00000008565	-	97	55.388	Microcebus_murinus
ENSTRUG00000007611	sf3b2	88	71.609	ENSMICG00000016942	-	88	64.011	Microcebus_murinus
ENSTRUG00000007611	sf3b2	88	71.763	ENSMOCG00000003136	Sf3b2	97	54.680	Microtus_ochrogaster
ENSTRUG00000007611	sf3b2	99	78.503	ENSMMOG00000012928	sf3b2	100	66.938	Mola_mola
ENSTRUG00000007611	sf3b2	88	72.188	ENSMODG00000008490	-	94	65.803	Monodelphis_domestica
ENSTRUG00000007611	sf3b2	88	67.244	ENSMODG00000025020	-	99	66.772	Monodelphis_domestica
ENSTRUG00000007611	sf3b2	96	72.081	ENSMALG00000015137	sf3b2	100	64.593	Monopterus_albus
ENSTRUG00000007611	sf3b2	88	72.214	MGP_CAROLIEiJ_G0022539	Sf3b2	97	54.805	Mus_caroli
ENSTRUG00000007611	sf3b2	88	71.763	ENSMUSG00000024853	Sf3b2	97	54.452	Mus_musculus
ENSTRUG00000007611	sf3b2	88	71.607	MGP_PahariEiJ_G0014036	Sf3b2	97	54.452	Mus_pahari
ENSTRUG00000007611	sf3b2	88	71.763	MGP_SPRETEiJ_G0023453	Sf3b2	97	54.504	Mus_spretus
ENSTRUG00000007611	sf3b2	88	71.607	ENSMPUG00000011349	SF3B2	87	63.846	Mustela_putorius_furo
ENSTRUG00000007611	sf3b2	88	71.451	ENSMLUG00000011136	SF3B2	86	64.149	Myotis_lucifugus
ENSTRUG00000007611	sf3b2	88	71.607	ENSNGAG00000012103	Sf3b2	97	54.629	Nannospalax_galili
ENSTRUG00000007611	sf3b2	88	69.659	ENSNLEG00000006007	SF3B2	81	76.692	Nomascus_leucogenys
ENSTRUG00000007611	sf3b2	77	73.816	ENSMEUG00000000019	SF3B2	82	65.625	Notamacropus_eugenii
ENSTRUG00000007611	sf3b2	88	67.504	ENSODEG00000017764	SF3B2	97	51.200	Octodon_degus
ENSTRUG00000007611	sf3b2	94	78.671	ENSONIG00000013068	sf3b2	90	77.419	Oreochromis_niloticus
ENSTRUG00000007611	sf3b2	88	66.719	ENSOANG00000012482	SF3B2	82	69.731	Ornithorhynchus_anatinus
ENSTRUG00000007611	sf3b2	98	61.935	ENSOCUG00000015722	-	91	64.093	Oryctolagus_cuniculus
ENSTRUG00000007611	sf3b2	67	42.884	ENSOCUG00000024154	-	100	43.130	Oryctolagus_cuniculus
ENSTRUG00000007611	sf3b2	99	72.676	ENSORLG00000008235	sf3b2	97	68.421	Oryzias_latipes
ENSTRUG00000007611	sf3b2	99	72.676	ENSORLG00020005357	sf3b2	100	68.421	Oryzias_latipes_hni
ENSTRUG00000007611	sf3b2	98	76.879	ENSORLG00015022454	sf3b2	94	76.369	Oryzias_latipes_hsok
ENSTRUG00000007611	sf3b2	99	73.398	ENSOMEG00000017480	sf3b2	100	69.321	Oryzias_melastigma
ENSTRUG00000007611	sf3b2	91	66.069	ENSOGAG00000005799	SF3B2	97	55.416	Otolemur_garnettii
ENSTRUG00000007611	sf3b2	88	71.919	ENSOARG00000002125	SF3B2	99	65.989	Ovis_aries
ENSTRUG00000007611	sf3b2	88	71.763	ENSPPAG00000007359	SF3B2	97	56.686	Pan_paniscus
ENSTRUG00000007611	sf3b2	94	65.857	ENSPPRG00000013334	SF3B2	97	54.835	Panthera_pardus
ENSTRUG00000007611	sf3b2	94	65.857	ENSPTIG00000015022	SF3B2	97	54.835	Panthera_tigris_altaica
ENSTRUG00000007611	sf3b2	88	71.763	ENSPTRG00000003912	SF3B2	97	56.751	Pan_troglodytes
ENSTRUG00000007611	sf3b2	88	71.763	ENSPANG00000008593	SF3B2	97	58.080	Papio_anubis
ENSTRUG00000007611	sf3b2	98	75.358	ENSPKIG00000016576	sf3b2	98	74.257	Paramormyrops_kingsleyae
ENSTRUG00000007611	sf3b2	89	72.956	ENSPSIG00000003158	SF3B2	99	66.360	Pelodiscus_sinensis
ENSTRUG00000007611	sf3b2	94	70.068	ENSPMGG00000000819	sf3b2	100	60.616	Periophthalmus_magnuspinnatus
ENSTRUG00000007611	sf3b2	98	60.610	ENSPEMG00000015451	-	92	61.255	Peromyscus_maniculatus_bairdii
ENSTRUG00000007611	sf3b2	88	71.763	ENSPEMG00000015437	Sf3b2	97	54.566	Peromyscus_maniculatus_bairdii
ENSTRUG00000007611	sf3b2	88	72.812	ENSPCIG00000008381	SF3B2	90	64.721	Phascolarctos_cinereus
ENSTRUG00000007611	sf3b2	88	86.116	ENSPFOG00000002552	sf3b2	100	65.114	Poecilia_formosa
ENSTRUG00000007611	sf3b2	88	86.304	ENSPLAG00000001471	sf3b2	100	65.345	Poecilia_latipinna
ENSTRUG00000007611	sf3b2	88	85.929	ENSPMEG00000013180	sf3b2	100	65.643	Poecilia_mexicana
ENSTRUG00000007611	sf3b2	88	86.304	ENSPREG00000002665	sf3b2	100	65.459	Poecilia_reticulata
ENSTRUG00000007611	sf3b2	57	62.000	ENSPPYG00000003034	-	88	52.745	Pongo_abelii
ENSTRUG00000007611	sf3b2	88	71.451	ENSPCAG00000005129	SF3B2	86	64.083	Procavia_capensis
ENSTRUG00000007611	sf3b2	88	71.607	ENSPCOG00000025375	SF3B2	97	56.100	Propithecus_coquereli
ENSTRUG00000007611	sf3b2	54	75.107	ENSPVAG00000005466	-	82	75.107	Pteropus_vampyrus
ENSTRUG00000007611	sf3b2	93	75.788	ENSPNYG00000023594	sf3b2	98	88.372	Pundamilia_nyererei
ENSTRUG00000007611	sf3b2	97	73.043	ENSPNAG00000001891	sf3b2	100	63.503	Pygocentrus_nattereri
ENSTRUG00000007611	sf3b2	88	71.607	ENSRNOG00000020412	Sf3b2	97	54.514	Rattus_norvegicus
ENSTRUG00000007611	sf3b2	94	65.857	ENSRBIG00000034065	SF3B2	97	56.328	Rhinopithecus_bieti
ENSTRUG00000007611	sf3b2	94	65.857	ENSRROG00000034496	SF3B2	97	56.328	Rhinopithecus_roxellana
ENSTRUG00000007611	sf3b2	88	71.763	ENSSBOG00000026337	SF3B2	97	55.606	Saimiri_boliviensis_boliviensis
ENSTRUG00000007611	sf3b2	100	51.861	ENSSHAG00000018043	-	88	55.811	Sarcophilus_harrisii
ENSTRUG00000007611	sf3b2	88	70.110	ENSSHAG00000010933	-	88	59.800	Sarcophilus_harrisii
ENSTRUG00000007611	sf3b2	99	72.766	ENSSFOG00015021125	sf3b2	100	62.358	Scleropages_formosus
ENSTRUG00000007611	sf3b2	76	87.097	ENSSMAG00000004079	sf3b2	100	68.265	Scophthalmus_maximus
ENSTRUG00000007611	sf3b2	97	77.164	ENSSDUG00000008499	sf3b2	100	67.627	Seriola_dumerili
ENSTRUG00000007611	sf3b2	76	87.287	ENSSLDG00000006838	sf3b2	100	68.694	Seriola_lalandi_dorsalis
ENSTRUG00000007611	sf3b2	57	92.063	ENSSARG00000003707	-	54	92.063	Sorex_araneus
ENSTRUG00000007611	sf3b2	95	66.440	ENSSPUG00000009198	SF3B2	98	56.914	Sphenodon_punctatus
ENSTRUG00000007611	sf3b2	96	81.132	ENSSPAG00000004406	sf3b2	100	66.890	Stegastes_partitus
ENSTRUG00000007611	sf3b2	88	71.763	ENSSSCG00000012957	SF3B2	97	56.621	Sus_scrofa
ENSTRUG00000007611	sf3b2	98	90.698	ENSTNIG00000007441	sf3b2	100	71.463	Tetraodon_nigroviridis
ENSTRUG00000007611	sf3b2	79	88.028	ENSTBEG00000004258	SF3B2	73	87.050	Tupaia_belangeri
ENSTRUG00000007611	sf3b2	88	71.763	ENSTTRG00000014339	SF3B2	87	63.846	Tursiops_truncatus
ENSTRUG00000007611	sf3b2	85	71.197	ENSUAMG00000020754	SF3B2	91	55.046	Ursus_americanus
ENSTRUG00000007611	sf3b2	88	71.763	ENSUMAG00000010994	SF3B2	87	63.846	Ursus_maritimus
ENSTRUG00000007611	sf3b2	61	83.898	ENSVPAG00000008695	SF3B2	61	89.024	Vicugna_pacos
ENSTRUG00000007611	sf3b2	88	71.607	ENSVVUG00000027029	SF3B2	87	63.892	Vulpes_vulpes
ENSTRUG00000007611	sf3b2	89	69.558	ENSXETG00000008422	sf3b2	99	55.293	Xenopus_tropicalis
ENSTRUG00000007611	sf3b2	95	78.625	ENSXCOG00000008943	sf3b2	93	77.496	Xiphophorus_couchianus
ENSTRUG00000007611	sf3b2	87	85.741	ENSXMAG00000008467	sf3b2	100	64.262	Xiphophorus_maculatus