EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000007886 (Gene tree)
Gene ID: 101080116
Gene Symbol: eif3d
Alias: eif3s7|wu:fb12a03
Full Name: eukaryotic translation initiation factor 3 subunit D
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5585 bases
Position: chr5:11880265-11885849
Accession: 101080116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000051868	eIF-3_zeta	PF05091.12	5.7e-214	1	1
ENSTRUP00000052687	eIF-3_zeta	PF05091.12	6e-214	1	1
ENSTRUP00000019627	eIF-3_zeta	PF05091.12	1.3e-131	1	2
ENSTRUP00000019627	eIF-3_zeta	PF05091.12	1.3e-131	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000054040	-	3343	XM_011604336	ENSTRUP00000051868	553 (aa)	XP_011602638	UPI000298C6FF
ENSTRUT00000052871	-	3421	-	ENSTRUP00000052687	563 (aa)	-	-
ENSTRUT00000019707	-	1254	-	ENSTRUP00000019627	417 (aa)	-	H2T4N9

Gene Model

Click here to download ENSTRUG00000007886's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000007886's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000007886	eif3d	96	90.977	ENSG00000100353	EIF3D	100	91.870	Homo_sapiens
ENSTRUG00000007886	eif3d	99	97.445	ENSAPOG00000002054	eif3d	98	98.066	Acanthochromis_polyacanthus
ENSTRUG00000007886	eif3d	96	91.541	ENSAMEG00000009639	EIF3D	97	91.541	Ailuropoda_melanoleuca
ENSTRUG00000007886	eif3d	99	95.811	ENSACIG00000013847	eif3d	97	95.811	Amphilophus_citrinellus
ENSTRUG00000007886	eif3d	100	97.649	ENSAOCG00000022455	eif3d	100	97.649	Amphiprion_ocellaris
ENSTRUG00000007886	eif3d	53	96.309	ENSAOCG00000005916	-	97	96.309	Amphiprion_ocellaris
ENSTRUG00000007886	eif3d	100	97.649	ENSAPEG00000020361	eif3d	100	97.649	Amphiprion_percula
ENSTRUG00000007886	eif3d	100	97.288	ENSATEG00000020784	eif3d	100	97.288	Anabas_testudineus
ENSTRUG00000007886	eif3d	92	92.262	ENSAPLG00000002632	EIF3D	99	84.774	Anas_platyrhynchos
ENSTRUG00000007886	eif3d	96	92.105	ENSACAG00000016308	EIF3D	97	92.105	Anolis_carolinensis
ENSTRUG00000007886	eif3d	96	90.977	ENSANAG00000026835	EIF3D	97	90.977	Aotus_nancymaae
ENSTRUG00000007886	eif3d	76	96.454	ENSACLG00000021712	eif3d	78	97.264	Astatotilapia_calliptera
ENSTRUG00000007886	eif3d	76	96.454	ENSACLG00000021430	EIF3D	89	97.264	Astatotilapia_calliptera
ENSTRUG00000007886	eif3d	99	96.350	ENSACLG00000021167	eif3d	99	96.727	Astatotilapia_calliptera
ENSTRUG00000007886	eif3d	76	96.454	ENSACLG00000021852	eif3d	81	97.264	Astatotilapia_calliptera
ENSTRUG00000007886	eif3d	76	96.454	ENSACLG00000021768	EIF3D	81	97.264	Astatotilapia_calliptera
ENSTRUG00000007886	eif3d	96	95.677	ENSAMXG00000017547	eif3d	96	95.677	Astyanax_mexicanus
ENSTRUG00000007886	eif3d	96	91.353	ENSBTAG00000001988	EIF3D	97	91.353	Bos_taurus
ENSTRUG00000007886	eif3d	96	44.604	WBGene00001227	eif-3.D	97	44.544	Caenorhabditis_elegans
ENSTRUG00000007886	eif3d	96	90.977	ENSCJAG00000013831	EIF3D	97	90.977	Callithrix_jacchus
ENSTRUG00000007886	eif3d	96	91.541	ENSCAFG00000001544	EIF3D	97	91.541	Canis_familiaris
ENSTRUG00000007886	eif3d	96	92.857	ENSCAFG00020004483	EIF3D	97	91.541	Canis_lupus_dingo
ENSTRUG00000007886	eif3d	96	91.353	ENSCHIG00000012106	EIF3D	97	91.353	Capra_hircus
ENSTRUG00000007886	eif3d	96	90.977	ENSTSYG00000008540	EIF3D	97	90.977	Carlito_syrichta
ENSTRUG00000007886	eif3d	96	89.118	ENSCAPG00000015164	EIF3D	94	89.118	Cavia_aperea
ENSTRUG00000007886	eif3d	100	89.587	ENSCPOG00000002529	EIF3D	97	91.165	Cavia_porcellus
ENSTRUG00000007886	eif3d	96	90.977	ENSCCAG00000027331	EIF3D	97	90.977	Cebus_capucinus
ENSTRUG00000007886	eif3d	96	90.977	ENSCATG00000045003	EIF3D	97	90.977	Cercocebus_atys
ENSTRUG00000007886	eif3d	98	90.364	ENSCLAG00000016545	EIF3D	99	90.182	Chinchilla_lanigera
ENSTRUG00000007886	eif3d	96	90.977	ENSCSAG00000007898	EIF3D	97	90.977	Chlorocebus_sabaeus
ENSTRUG00000007886	eif3d	96	88.722	ENSCHOG00000004811	EIF3D	97	88.722	Choloepus_hoffmanni
ENSTRUG00000007886	eif3d	96	92.669	ENSCPBG00000016309	EIF3D	97	92.669	Chrysemys_picta_bellii
ENSTRUG00000007886	eif3d	96	66.108	ENSCING00000003680	-	96	66.234	Ciona_intestinalis
ENSTRUG00000007886	eif3d	99	63.830	ENSCSAVG00000001450	-	96	64.286	Ciona_savignyi
ENSTRUG00000007886	eif3d	96	90.977	ENSCANG00000031179	EIF3D	97	90.977	Colobus_angolensis_palliatus
ENSTRUG00000007886	eif3d	96	91.353	ENSCGRG00001016584	EIF3D	97	91.353	Cricetulus_griseus_chok1gshd
ENSTRUG00000007886	eif3d	96	91.353	ENSCGRG00000000302	EIF3D	97	91.353	Cricetulus_griseus_crigri
ENSTRUG00000007886	eif3d	96	95.865	ENSCSEG00000020548	eif3d	96	95.865	Cynoglossus_semilaevis
ENSTRUG00000007886	eif3d	78	98.214	ENSCVAG00000001999	eif3d	85	98.214	Cyprinodon_variegatus
ENSTRUG00000007886	eif3d	96	95.677	ENSDARG00000021257	eif3d	100	97.561	Danio_rerio
ENSTRUG00000007886	eif3d	52	91.003	ENSDNOG00000018482	EIF3D	92	91.003	Dasypus_novemcinctus
ENSTRUG00000007886	eif3d	96	90.977	ENSDORG00000010491	Eif3d	97	90.977	Dipodomys_ordii
ENSTRUG00000007886	eif3d	98	53.707	FBgn0037994	eIF3d2	96	53.591	Drosophila_melanogaster
ENSTRUG00000007886	eif3d	95	59.023	FBgn0040227	eIF3d1	93	58.989	Drosophila_melanogaster
ENSTRUG00000007886	eif3d	84	78.167	ENSETEG00000009404	-	96	78.167	Echinops_telfairi
ENSTRUG00000007886	eif3d	90	91.071	ENSETEG00000002070	-	99	75.000	Echinops_telfairi
ENSTRUG00000007886	eif3d	84	75.936	ENSETEG00000016315	-	99	75.936	Echinops_telfairi
ENSTRUG00000007886	eif3d	60	73.991	ENSETEG00000020233	-	100	73.991	Echinops_telfairi
ENSTRUG00000007886	eif3d	87	76.605	ENSEBUG00000009405	eif3d	93	81.013	Eptatretus_burgeri
ENSTRUG00000007886	eif3d	96	91.353	ENSEASG00005018906	EIF3D	97	91.353	Equus_asinus_asinus
ENSTRUG00000007886	eif3d	96	91.165	ENSECAG00000022413	EIF3D	97	91.165	Equus_caballus
ENSTRUG00000007886	eif3d	92	90.187	ENSEEUG00000015771	EIF3D	97	81.391	Erinaceus_europaeus
ENSTRUG00000007886	eif3d	96	95.301	ENSELUG00000018698	eif3d	96	95.301	Esox_lucius
ENSTRUG00000007886	eif3d	96	91.541	ENSFCAG00000001131	EIF3D	97	91.541	Felis_catus
ENSTRUG00000007886	eif3d	96	92.481	ENSFALG00000013012	EIF3D	97	92.481	Ficedula_albicollis
ENSTRUG00000007886	eif3d	96	90.977	ENSFDAG00000004352	EIF3D	97	90.977	Fukomys_damarensis
ENSTRUG00000007886	eif3d	96	93.233	ENSGMOG00000013341	eif3d	97	93.233	Gadus_morhua
ENSTRUG00000007886	eif3d	96	92.293	ENSGALG00000012529	EIF3D	97	92.293	Gallus_gallus
ENSTRUG00000007886	eif3d	100	95.841	ENSGACG00000014538	eif3d	99	95.841	Gasterosteus_aculeatus
ENSTRUG00000007886	eif3d	96	92.669	ENSGAGG00000009617	EIF3D	97	92.669	Gopherus_agassizii
ENSTRUG00000007886	eif3d	96	90.977	ENSGGOG00000003428	EIF3D	97	90.977	Gorilla_gorilla
ENSTRUG00000007886	eif3d	100	96.926	ENSHBUG00000017230	eif3d	100	96.926	Haplochromis_burtoni
ENSTRUG00000007886	eif3d	96	91.165	ENSHGLG00000016422	-	97	91.165	Heterocephalus_glaber_female
ENSTRUG00000007886	eif3d	96	76.316	ENSHGLG00000006449	-	98	76.316	Heterocephalus_glaber_female
ENSTRUG00000007886	eif3d	93	82.209	ENSHGLG00000000135	-	96	72.368	Heterocephalus_glaber_female
ENSTRUG00000007886	eif3d	96	76.128	ENSHGLG00100013710	-	98	76.128	Heterocephalus_glaber_male
ENSTRUG00000007886	eif3d	93	82.209	ENSHGLG00100001321	-	96	76.316	Heterocephalus_glaber_male
ENSTRUG00000007886	eif3d	96	91.165	ENSHGLG00100007477	-	97	91.165	Heterocephalus_glaber_male
ENSTRUG00000007886	eif3d	100	96.383	ENSHCOG00000007799	eif3d	100	96.383	Hippocampus_comes
ENSTRUG00000007886	eif3d	96	95.677	ENSIPUG00000017267	eif3d	96	95.677	Ictalurus_punctatus
ENSTRUG00000007886	eif3d	96	91.353	ENSSTOG00000011335	EIF3D	97	91.353	Ictidomys_tridecemlineatus
ENSTRUG00000007886	eif3d	96	91.165	ENSJJAG00000010854	Eif3d	97	91.165	Jaculus_jaculus
ENSTRUG00000007886	eif3d	100	96.383	ENSKMAG00000007133	eif3d	100	96.383	Kryptolebias_marmoratus
ENSTRUG00000007886	eif3d	100	96.203	ENSLBEG00000005296	eif3d	96	96.617	Labrus_bergylta
ENSTRUG00000007886	eif3d	96	87.218	ENSLACG00000001606	EIF3D	95	87.218	Latimeria_chalumnae
ENSTRUG00000007886	eif3d	99	89.560	ENSLAFG00000001714	EIF3D	97	91.353	Loxodonta_africana
ENSTRUG00000007886	eif3d	96	90.977	ENSMFAG00000000481	EIF3D	97	90.977	Macaca_fascicularis
ENSTRUG00000007886	eif3d	96	90.977	ENSMMUG00000012754	EIF3D	97	90.977	Macaca_mulatta
ENSTRUG00000007886	eif3d	96	90.977	ENSMNEG00000012843	EIF3D	97	90.977	Macaca_nemestrina
ENSTRUG00000007886	eif3d	96	90.977	ENSMLEG00000037251	EIF3D	97	90.977	Mandrillus_leucophaeus
ENSTRUG00000007886	eif3d	100	97.468	ENSMAMG00000020219	eif3d	100	97.468	Mastacembelus_armatus
ENSTRUG00000007886	eif3d	100	96.926	ENSMZEG00005023294	eif3d	100	96.926	Maylandia_zebra
ENSTRUG00000007886	eif3d	96	92.683	ENSMZEG00005024006	eif3d	96	92.683	Maylandia_zebra
ENSTRUG00000007886	eif3d	54	92.282	ENSMGAG00000012653	EIF3D	100	92.282	Meleagris_gallopavo
ENSTRUG00000007886	eif3d	96	91.353	ENSMAUG00000013161	Eif3d	97	91.353	Mesocricetus_auratus
ENSTRUG00000007886	eif3d	96	91.353	ENSMICG00000012161	EIF3D	97	91.353	Microcebus_murinus
ENSTRUG00000007886	eif3d	96	91.541	ENSMOCG00000011605	Eif3d	97	91.541	Microtus_ochrogaster
ENSTRUG00000007886	eif3d	99	97.263	ENSMMOG00000021496	eif3d	99	97.263	Mola_mola
ENSTRUG00000007886	eif3d	96	91.917	ENSMODG00000000821	EIF3D	97	91.917	Monodelphis_domestica
ENSTRUG00000007886	eif3d	100	96.745	ENSMALG00000019436	eif3d	100	96.745	Monopterus_albus
ENSTRUG00000007886	eif3d	96	91.353	MGP_CAROLIEiJ_G0019973	Eif3d	97	91.353	Mus_caroli
ENSTRUG00000007886	eif3d	96	91.353	ENSMUSG00000016554	Eif3d	100	92.442	Mus_musculus
ENSTRUG00000007886	eif3d	96	91.353	MGP_PahariEiJ_G0019975	Eif3d	97	91.353	Mus_pahari
ENSTRUG00000007886	eif3d	96	91.353	MGP_SPRETEiJ_G0020871	Eif3d	97	91.353	Mus_spretus
ENSTRUG00000007886	eif3d	59	95.312	ENSMPUG00000012581	EIF3D	100	59.219	Mustela_putorius_furo
ENSTRUG00000007886	eif3d	96	90.977	ENSMLUG00000015857	EIF3D	97	90.977	Myotis_lucifugus
ENSTRUG00000007886	eif3d	96	91.165	ENSNGAG00000012038	Eif3d	97	91.165	Nannospalax_galili
ENSTRUG00000007886	eif3d	96	90.977	ENSNLEG00000014560	EIF3D	97	90.977	Nomascus_leucogenys
ENSTRUG00000007886	eif3d	96	91.541	ENSMEUG00000004561	EIF3D	97	91.541	Notamacropus_eugenii
ENSTRUG00000007886	eif3d	79	93.636	ENSOPRG00000006924	EIF3D	96	85.895	Ochotona_princeps
ENSTRUG00000007886	eif3d	96	91.165	ENSODEG00000011039	EIF3D	97	91.165	Octodon_degus
ENSTRUG00000007886	eif3d	100	96.383	ENSONIG00000009713	eif3d	100	96.383	Oreochromis_niloticus
ENSTRUG00000007886	eif3d	92	92.262	ENSOANG00000007483	EIF3D	99	80.439	Ornithorhynchus_anatinus
ENSTRUG00000007886	eif3d	96	91.165	ENSOCUG00000006363	EIF3D	97	91.165	Oryctolagus_cuniculus
ENSTRUG00000007886	eif3d	96	94.007	ENSORLG00000001449	eif3d	96	93.996	Oryzias_latipes
ENSTRUG00000007886	eif3d	52	92.734	ENSORLG00020013943	eif3d	99	91.216	Oryzias_latipes_hni
ENSTRUG00000007886	eif3d	96	95.865	ENSORLG00020000383	eif3d	95	95.865	Oryzias_latipes_hni
ENSTRUG00000007886	eif3d	52	95.848	ENSORLG00015006930	eif3d	90	95.848	Oryzias_latipes_hsok
ENSTRUG00000007886	eif3d	55	89.439	ENSORLG00015006954	eif3d	99	89.439	Oryzias_latipes_hsok
ENSTRUG00000007886	eif3d	52	91.349	ENSOMEG00000017337	eif3d	95	91.349	Oryzias_melastigma
ENSTRUG00000007886	eif3d	52	91.003	ENSOMEG00000017372	eif3d	95	91.003	Oryzias_melastigma
ENSTRUG00000007886	eif3d	96	90.977	ENSOGAG00000002978	EIF3D	97	90.977	Otolemur_garnettii
ENSTRUG00000007886	eif3d	96	91.353	ENSOARG00000018926	EIF3D	97	91.353	Ovis_aries
ENSTRUG00000007886	eif3d	96	90.977	ENSPPAG00000031183	EIF3D	97	90.977	Pan_paniscus
ENSTRUG00000007886	eif3d	96	91.541	ENSPPRG00000007244	EIF3D	97	91.541	Panthera_pardus
ENSTRUG00000007886	eif3d	96	90.414	ENSPTIG00000012272	EIF3D	96	90.414	Panthera_tigris_altaica
ENSTRUG00000007886	eif3d	96	90.977	ENSPTRG00000014313	EIF3D	97	90.977	Pan_troglodytes
ENSTRUG00000007886	eif3d	96	90.977	ENSPANG00000023980	EIF3D	97	90.977	Papio_anubis
ENSTRUG00000007886	eif3d	100	95.118	ENSPKIG00000013892	eif3d	100	94.937	Paramormyrops_kingsleyae
ENSTRUG00000007886	eif3d	96	92.857	ENSPSIG00000010983	EIF3D	97	92.857	Pelodiscus_sinensis
ENSTRUG00000007886	eif3d	89	97.590	ENSPMGG00000004524	eif3d	98	91.876	Periophthalmus_magnuspinnatus
ENSTRUG00000007886	eif3d	96	91.353	ENSPEMG00000014069	Eif3d	97	91.353	Peromyscus_maniculatus_bairdii
ENSTRUG00000007886	eif3d	52	80.822	ENSPMAG00000008165	eif3d	97	80.822	Petromyzon_marinus
ENSTRUG00000007886	eif3d	96	91.541	ENSPCIG00000021563	EIF3D	97	91.541	Phascolarctos_cinereus
ENSTRUG00000007886	eif3d	100	96.926	ENSPFOG00000007516	eif3d	100	96.926	Poecilia_formosa
ENSTRUG00000007886	eif3d	100	96.926	ENSPLAG00000015253	eif3d	100	96.926	Poecilia_latipinna
ENSTRUG00000007886	eif3d	100	96.745	ENSPMEG00000019987	eif3d	100	96.745	Poecilia_mexicana
ENSTRUG00000007886	eif3d	92	91.667	ENSPPYG00000011774	EIF3D	97	83.271	Pongo_abelii
ENSTRUG00000007886	eif3d	83	94.488	ENSPCAG00000007788	EIF3D	83	94.488	Procavia_capensis
ENSTRUG00000007886	eif3d	96	86.842	ENSPCOG00000014552	EIF3D	96	86.842	Propithecus_coquereli
ENSTRUG00000007886	eif3d	96	91.165	ENSPVAG00000002014	EIF3D	97	91.165	Pteropus_vampyrus
ENSTRUG00000007886	eif3d	100	96.745	ENSPNYG00000011917	eif3d	100	96.745	Pundamilia_nyererei
ENSTRUG00000007886	eif3d	100	93.852	ENSPNAG00000000176	eif3d	99	94.679	Pygocentrus_nattereri
ENSTRUG00000007886	eif3d	96	91.353	ENSRNOG00000005804	Eif3d	97	91.353	Rattus_norvegicus
ENSTRUG00000007886	eif3d	96	90.977	ENSRBIG00000041563	EIF3D	97	90.977	Rhinopithecus_bieti
ENSTRUG00000007886	eif3d	96	90.977	ENSRROG00000039588	EIF3D	97	90.977	Rhinopithecus_roxellana
ENSTRUG00000007886	eif3d	96	90.977	ENSSBOG00000032811	EIF3D	97	90.977	Saimiri_boliviensis_boliviensis
ENSTRUG00000007886	eif3d	96	91.729	ENSSHAG00000011209	EIF3D	97	91.729	Sarcophilus_harrisii
ENSTRUG00000007886	eif3d	96	95.489	ENSSFOG00015023800	eif3d	96	95.489	Scleropages_formosus
ENSTRUG00000007886	eif3d	96	96.429	ENSSMAG00000013962	eif3d	96	96.429	Scophthalmus_maximus
ENSTRUG00000007886	eif3d	100	96.926	ENSSDUG00000023224	eif3d	100	96.926	Seriola_dumerili
ENSTRUG00000007886	eif3d	100	96.926	ENSSLDG00000006833	eif3d	100	96.926	Seriola_lalandi_dorsalis
ENSTRUG00000007886	eif3d	86	80.211	ENSSARG00000012488	EIF3D	97	80.211	Sorex_araneus
ENSTRUG00000007886	eif3d	96	91.917	ENSSPUG00000011683	EIF3D	97	91.917	Sphenodon_punctatus
ENSTRUG00000007886	eif3d	100	97.107	ENSSPAG00000003591	eif3d	100	97.107	Stegastes_partitus
ENSTRUG00000007886	eif3d	96	91.353	ENSSSCG00000000141	EIF3D	97	91.353	Sus_scrofa
ENSTRUG00000007886	eif3d	96	92.293	ENSTGUG00000010728	EIF3D	97	92.293	Taeniopygia_guttata
ENSTRUG00000007886	eif3d	99	97.263	ENSTNIG00000011263	eif3d	100	99.049	Tetraodon_nigroviridis
ENSTRUG00000007886	eif3d	89	91.039	ENSTBEG00000006268	EIF3D	96	91.039	Tupaia_belangeri
ENSTRUG00000007886	eif3d	96	90.602	ENSTTRG00000006637	EIF3D	97	90.602	Tursiops_truncatus
ENSTRUG00000007886	eif3d	96	92.857	ENSUAMG00000017485	EIF3D	99	90.545	Ursus_americanus
ENSTRUG00000007886	eif3d	96	91.541	ENSUMAG00000015827	EIF3D	97	91.541	Ursus_maritimus
ENSTRUG00000007886	eif3d	53	84.880	ENSVPAG00000000359	-	100	84.880	Vicugna_pacos
ENSTRUG00000007886	eif3d	96	92.857	ENSVVUG00000023578	EIF3D	97	91.541	Vulpes_vulpes
ENSTRUG00000007886	eif3d	96	90.038	ENSXETG00000027259	eif3d	96	90.038	Xenopus_tropicalis
ENSTRUG00000007886	eif3d	96	87.970	ENSXCOG00000011633	eif3d	97	87.970	Xiphophorus_couchianus
ENSTRUG00000007886	eif3d	100	97.107	ENSXMAG00000000954	eif3d	100	97.107	Xiphophorus_maculatus