EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSTRUG00000007996 (Gene tree)
Gene ID
101077318
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Minus strand
Length
5762 bases
Position
chr3:1894203-1899964
Accession
101077318
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTRUP00000019905CSDPF00313.226.5e-8115
ENSTRUP00000019905CSDPF00313.226.5e-8125
ENSTRUP00000019905CSDPF00313.226.5e-8135
ENSTRUP00000019905CSDPF00313.226.5e-8145
ENSTRUP00000019905CSDPF00313.226.5e-8155
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTRUT00000019986-2298XM_011621586ENSTRUP00000019905765 (aa)XP_011619888H2T5G6
Gene Model
Click here to download ENSTRUG00000007996's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000007996's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTRUG00000007996csde110074.512ENSG00000009307CSDE110083.088Homo_sapiens
ENSTRUG00000007996csde110088.281ENSAPOG00000015538csde110088.281Acanthochromis_polyacanthus
ENSTRUG00000007996csde110073.828ENSAMEG00000017129CSDE19473.828Ailuropoda_melanoleuca
ENSTRUG00000007996csde19087.568ENSACIG00000015175csde110087.568Amphilophus_citrinellus
ENSTRUG00000007996csde110088.281ENSAOCG00000011510csde110088.281Amphiprion_ocellaris
ENSTRUG00000007996csde110088.411ENSAPEG00000007194csde110088.411Amphiprion_percula
ENSTRUG00000007996csde110086.996ENSATEG00000003864csde110086.996Anabas_testudineus
ENSTRUG00000007996csde110077.053ENSAPLG00000008797CSDE110077.053Anas_platyrhynchos
ENSTRUG00000007996csde110073.935ENSACAG00000003120CSDE110073.935Anolis_carolinensis
ENSTRUG00000007996csde18960.777ENSANAG00000028396-9160.777Aotus_nancymaae
ENSTRUG00000007996csde110074.382ENSANAG00000024665CSDE19576.689Aotus_nancymaae
ENSTRUG00000007996csde110086.216ENSACLG00000013296csde110086.216Astatotilapia_calliptera
ENSTRUG00000007996csde110082.857ENSAMXG00000007436csde110082.857Astyanax_mexicanus
ENSTRUG00000007996csde110074.382ENSBTAG00000000678CSDE110074.382Bos_taurus
ENSTRUG00000007996csde110074.382ENSCJAG00000012565CSDE19474.382Callithrix_jacchus
ENSTRUG00000007996csde19874.900ENSCAFG00000009618CSDE19474.900Canis_familiaris
ENSTRUG00000007996csde110074.772ENSCAFG00020000481CSDE110074.772Canis_lupus_dingo
ENSTRUG00000007996csde110074.382ENSCHIG00000017250CSDE110074.382Capra_hircus
ENSTRUG00000007996csde110074.642ENSTSYG00000003747CSDE110074.642Carlito_syrichta
ENSTRUG00000007996csde110052.125ENSCAPG00000015128CSDE110052.125Cavia_aperea
ENSTRUG00000007996csde110069.406ENSCPOG00000040388CSDE110069.406Cavia_porcellus
ENSTRUG00000007996csde19652.691ENSCCAG00000030878-9152.691Cebus_capucinus
ENSTRUG00000007996csde110074.382ENSCCAG00000036794CSDE19576.689Cebus_capucinus
ENSTRUG00000007996csde19553.333ENSCCAG00000033677-9953.333Cebus_capucinus
ENSTRUG00000007996csde110074.512ENSCATG00000036962CSDE19774.512Cercocebus_atys
ENSTRUG00000007996csde110075.033ENSCLAG00000006618CSDE110075.033Chinchilla_lanigera
ENSTRUG00000007996csde110071.625ENSCSAG00000001658CSDE19571.625Chlorocebus_sabaeus
ENSTRUG00000007996csde110073.491ENSCHOG00000000918CSDE18973.491Choloepus_hoffmanni
ENSTRUG00000007996csde110077.053ENSCPBG00000016547CSDE110077.053Chrysemys_picta_bellii
ENSTRUG00000007996csde19742.203ENSCING00000014465-9542.203Ciona_intestinalis
ENSTRUG00000007996csde19542.000ENSCSAVG00000008100-10040.699Ciona_savignyi
ENSTRUG00000007996csde18978.598ENSCANG00000031069-9878.598Colobus_angolensis_palliatus
ENSTRUG00000007996csde110074.512ENSCANG00000035096CSDE19774.512Colobus_angolensis_palliatus
ENSTRUG00000007996csde110060.598ENSCGRG00001014011-10060.598Cricetulus_griseus_chok1gshd
ENSTRUG00000007996csde110074.122ENSCGRG00001016833-10074.122Cricetulus_griseus_chok1gshd
ENSTRUG00000007996csde110072.174ENSCGRG00000005831-10072.174Cricetulus_griseus_crigri
ENSTRUG00000007996csde19669.265ENSCGRG00000002225-10069.265Cricetulus_griseus_crigri
ENSTRUG00000007996csde110086.476ENSCSEG00000002620csde110086.476Cynoglossus_semilaevis
ENSTRUG00000007996csde110085.566ENSCVAG00000001344csde110085.566Cyprinodon_variegatus
ENSTRUG00000007996csde110080.451ENSDARG00000074758csde110082.228Danio_rerio
ENSTRUG00000007996csde18151.575ENSDNOG00000034464-9951.575Dasypus_novemcinctus
ENSTRUG00000007996csde110074.935ENSDNOG00000010287-9374.935Dasypus_novemcinctus
ENSTRUG00000007996csde19973.284ENSDORG00000011609Csde110073.284Dipodomys_ordii
ENSTRUG00000007996csde19847.500FBgn0263352Unr7446.573Drosophila_melanogaster
ENSTRUG00000007996csde19381.301ENSETEG00000002491-8266.763Echinops_telfairi
ENSTRUG00000007996csde19957.963ENSETEG00000013678-9957.963Echinops_telfairi
ENSTRUG00000007996csde19066.297ENSETEG00000006280-9966.297Echinops_telfairi
ENSTRUG00000007996csde17951.325ENSETEG00000007109-9951.325Echinops_telfairi
ENSTRUG00000007996csde19953.818ENSEBUG00000008647csde19952.148Eptatretus_burgeri
ENSTRUG00000007996csde110074.902ENSEASG00005006284CSDE110072.000Equus_asinus_asinus
ENSTRUG00000007996csde110074.902ENSECAG00000020885CSDE19974.370Equus_caballus
ENSTRUG00000007996csde19280.062ENSEEUG00000006286CSDE16880.062Erinaceus_europaeus
ENSTRUG00000007996csde110081.865ENSELUG00000015507csde110081.865Esox_lucius
ENSTRUG00000007996csde110074.772ENSFCAG00000029266CSDE110074.772Felis_catus
ENSTRUG00000007996csde110073.810ENSFALG00000003407CSDE110073.810Ficedula_albicollis
ENSTRUG00000007996csde19973.433ENSFDAG00000007882CSDE110073.433Fukomys_damarensis
ENSTRUG00000007996csde19885.695ENSFHEG00000010799csde19985.695Fundulus_heteroclitus
ENSTRUG00000007996csde19981.704ENSGMOG00000012731csde110081.704Gadus_morhua
ENSTRUG00000007996csde19873.946ENSGALG00000002139CSDE19873.946Gallus_gallus
ENSTRUG00000007996csde19386.565ENSGAFG00000005241csde19586.565Gambusia_affinis
ENSTRUG00000007996csde19983.689ENSGACG00000004544csde110083.689Gasterosteus_aculeatus
ENSTRUG00000007996csde110077.184ENSGAGG00000017685CSDE110074.185Gopherus_agassizii
ENSTRUG00000007996csde110074.512ENSGGOG00000002164CSDE110074.512Gorilla_gorilla
ENSTRUG00000007996csde110086.216ENSHBUG00000020315csde110086.216Haplochromis_burtoni
ENSTRUG00000007996csde19956.713ENSHGLG00000000650-9956.713Heterocephalus_glaber_female
ENSTRUG00000007996csde110067.620ENSHGLG00000009620-10067.620Heterocephalus_glaber_female
ENSTRUG00000007996csde110066.797ENSHGLG00000003829-10066.797Heterocephalus_glaber_female
ENSTRUG00000007996csde19665.224ENSHGLG00000008555-10065.224Heterocephalus_glaber_female
ENSTRUG00000007996csde19964.961ENSHGLG00000007471-9864.961Heterocephalus_glaber_female
ENSTRUG00000007996csde110061.034ENSHGLG00000019549-10061.034Heterocephalus_glaber_female
ENSTRUG00000007996csde19662.806ENSHGLG00000010039-10062.806Heterocephalus_glaber_female
ENSTRUG00000007996csde19960.000ENSHGLG00100002245-9960.000Heterocephalus_glaber_male
ENSTRUG00000007996csde110074.382ENSHGLG00100019438-10074.382Heterocephalus_glaber_male
ENSTRUG00000007996csde19662.584ENSHGLG00100006910-10062.584Heterocephalus_glaber_male
ENSTRUG00000007996csde19363.180ENSHGLG00100004195-10063.180Heterocephalus_glaber_male
ENSTRUG00000007996csde19757.684ENSHGLG00100004833-10057.684Heterocephalus_glaber_male
ENSTRUG00000007996csde19964.436ENSHGLG00100007287-9864.436Heterocephalus_glaber_male
ENSTRUG00000007996csde110062.630ENSHGLG00100012072-10062.630Heterocephalus_glaber_male
ENSTRUG00000007996csde110060.938ENSHGLG00100001846-10060.938Heterocephalus_glaber_male
ENSTRUG00000007996csde110084.525ENSHCOG00000004158csde110084.525Hippocampus_comes
ENSTRUG00000007996csde110081.429ENSIPUG00000000355csde110081.429Ictalurus_punctatus
ENSTRUG00000007996csde110062.100ENSSTOG00000030994-10062.100Ictidomys_tridecemlineatus
ENSTRUG00000007996csde19263.655ENSSTOG00000032722-9863.655Ictidomys_tridecemlineatus
ENSTRUG00000007996csde19973.284ENSJJAG00000019571Csde110073.284Jaculus_jaculus
ENSTRUG00000007996csde110081.421ENSKMAG00000005685csde110081.017Kryptolebias_marmoratus
ENSTRUG00000007996csde110087.126ENSLBEG00000014770csde110087.126Labrus_bergylta
ENSTRUG00000007996csde110069.667ENSLACG00000018452CSDE19469.877Latimeria_chalumnae
ENSTRUG00000007996csde110078.742ENSLOCG00000010413csde19478.742Lepisosteus_oculatus
ENSTRUG00000007996csde110074.512ENSLAFG00000007150CSDE19674.512Loxodonta_africana
ENSTRUG00000007996csde110074.512ENSMFAG00000003674CSDE110074.512Macaca_fascicularis
ENSTRUG00000007996csde110074.512ENSMMUG00000001974CSDE110074.512Macaca_mulatta
ENSTRUG00000007996csde110074.512ENSMNEG00000045247CSDE19774.512Macaca_nemestrina
ENSTRUG00000007996csde110074.252ENSMLEG00000038673CSDE19474.252Mandrillus_leucophaeus
ENSTRUG00000007996csde110087.891ENSMAMG00000008821csde110087.891Mastacembelus_armatus
ENSTRUG00000007996csde110086.216ENSMZEG00005021675csde110086.216Maylandia_zebra
ENSTRUG00000007996csde110077.083ENSMGAG00000016381CSDE110077.083Meleagris_gallopavo
ENSTRUG00000007996csde19973.134ENSMAUG00000014031Csde110073.134Mesocricetus_auratus
ENSTRUG00000007996csde110074.642ENSMICG00000002050CSDE19674.576Microcebus_murinus
ENSTRUG00000007996csde110074.122ENSMOCG00000018960Csde110074.122Microtus_ochrogaster
ENSTRUG00000007996csde110088.687ENSMMOG00000015075csde110088.687Mola_mola
ENSTRUG00000007996csde110075.227ENSMODG00000004685CSDE110073.125Monodelphis_domestica
ENSTRUG00000007996csde110087.516ENSMALG00000007132csde110087.516Monopterus_albus
ENSTRUG00000007996csde110074.252MGP_CAROLIEiJ_G0025444Csde19991.176Mus_caroli
ENSTRUG00000007996csde110074.252ENSMUSG00000068823Csde19891.176Mus_musculus
ENSTRUG00000007996csde110074.252MGP_PahariEiJ_G0026888Csde19991.176Mus_pahari
ENSTRUG00000007996csde110074.252MGP_SPRETEiJ_G0026394Csde19991.176Mus_spretus
ENSTRUG00000007996csde19871.939ENSMPUG00000005753CSDE19971.939Mustela_putorius_furo
ENSTRUG00000007996csde110074.122ENSMLUG00000005681CSDE19474.122Myotis_lucifugus
ENSTRUG00000007996csde19649.666ENSNGAG00000012599-10049.666Nannospalax_galili
ENSTRUG00000007996csde19973.284ENSNGAG00000021929Csde110073.284Nannospalax_galili
ENSTRUG00000007996csde110086.216ENSNBRG00000020808csde110086.216Neolamprologus_brichardi
ENSTRUG00000007996csde110074.512ENSNLEG00000004842CSDE19774.512Nomascus_leucogenys
ENSTRUG00000007996csde19873.307ENSMEUG00000002677CSDE19973.307Notamacropus_eugenii
ENSTRUG00000007996csde19868.515ENSOPRG00000005002CSDE18268.515Ochotona_princeps
ENSTRUG00000007996csde19973.433ENSODEG00000007383-10073.433Octodon_degus
ENSTRUG00000007996csde19650.885ENSODEG00000005979-9850.885Octodon_degus
ENSTRUG00000007996csde110081.028ENSONIG00000009309csde110081.028Oreochromis_niloticus
ENSTRUG00000007996csde110074.658ENSOANG00000003346-8174.658Ornithorhynchus_anatinus
ENSTRUG00000007996csde110074.382ENSOCUG00000016438CSDE19474.382Oryctolagus_cuniculus
ENSTRUG00000007996csde110085.156ENSORLG00000000707csde110085.156Oryzias_latipes
ENSTRUG00000007996csde110081.932ENSORLG00020005148csde110080.025Oryzias_latipes_hni
ENSTRUG00000007996csde110085.286ENSORLG00015019415csde110085.286Oryzias_latipes_hsok
ENSTRUG00000007996csde110085.547ENSOMEG00000015656csde110085.547Oryzias_melastigma
ENSTRUG00000007996csde110074.772ENSOGAG00000012127CSDE19474.772Otolemur_garnettii
ENSTRUG00000007996csde110074.382ENSOARG00000020034CSDE19474.382Ovis_aries
ENSTRUG00000007996csde110074.512ENSPPAG00000025861CSDE110074.512Pan_paniscus
ENSTRUG00000007996csde110074.772ENSPPRG00000006747CSDE19474.772Panthera_pardus
ENSTRUG00000007996csde110074.772ENSPTIG00000015468CSDE110071.875Panthera_tigris_altaica
ENSTRUG00000007996csde110074.512ENSPTRG00000033721CSDE110071.625Pan_troglodytes
ENSTRUG00000007996csde110074.512ENSPANG00000018873CSDE110074.512Papio_anubis
ENSTRUG00000007996csde110080.704ENSPKIG00000009459csde110080.704Paramormyrops_kingsleyae
ENSTRUG00000007996csde19376.327ENSPSIG00000003823CSDE19676.327Pelodiscus_sinensis
ENSTRUG00000007996csde110085.436ENSPMGG00000000772csde110085.436Periophthalmus_magnuspinnatus
ENSTRUG00000007996csde19973.433ENSPEMG00000020357-10073.433Peromyscus_maniculatus_bairdii
ENSTRUG00000007996csde110073.250ENSPCIG00000022587CSDE110073.250Phascolarctos_cinereus
ENSTRUG00000007996csde19784.292ENSPFOG00000012664csde110084.448Poecilia_formosa
ENSTRUG00000007996csde19578.955ENSPLAG00000017680csde19378.955Poecilia_latipinna
ENSTRUG00000007996csde19578.593ENSPMEG00000005094csde19678.593Poecilia_mexicana
ENSTRUG00000007996csde110081.920ENSPREG00000011631csde110079.277Poecilia_reticulata
ENSTRUG00000007996csde110071.500ENSPPYG00000000996CSDE110071.500Pongo_abelii
ENSTRUG00000007996csde110072.302ENSPCAG00000014368CSDE19472.302Procavia_capensis
ENSTRUG00000007996csde19069.145ENSPCOG00000008223-9269.145Propithecus_coquereli
ENSTRUG00000007996csde110074.772ENSPCOG00000017893CSDE110074.772Propithecus_coquereli
ENSTRUG00000007996csde110070.351ENSPVAG00000008225CSDE19570.351Pteropus_vampyrus
ENSTRUG00000007996csde110086.216ENSPNYG00000013745csde110086.216Pundamilia_nyererei
ENSTRUG00000007996csde110082.597ENSPNAG00000001958csde110082.597Pygocentrus_nattereri
ENSTRUG00000007996csde110071.250ENSRNOG00000061058Csde110071.250Rattus_norvegicus
ENSTRUG00000007996csde110071.688ENSRBIG00000038088-10071.688Rhinopithecus_bieti
ENSTRUG00000007996csde110070.221ENSRBIG00000038966-9470.221Rhinopithecus_bieti
ENSTRUG00000007996csde110074.512ENSRROG00000043101CSDE19774.512Rhinopithecus_roxellana
ENSTRUG00000007996csde110074.382ENSSBOG00000035592CSDE19574.382Saimiri_boliviensis_boliviensis
ENSTRUG00000007996csde110076.203ENSSHAG00000009831CSDE110076.203Sarcophilus_harrisii
ENSTRUG00000007996csde110080.494ENSSFOG00015007498csde110080.494Scleropages_formosus
ENSTRUG00000007996csde110087.500ENSSMAG00000007203csde110087.500Scophthalmus_maximus
ENSTRUG00000007996csde110087.891ENSSDUG00000015380csde110087.891Seriola_dumerili
ENSTRUG00000007996csde110087.891ENSSLDG00000008819csde110087.891Seriola_lalandi_dorsalis
ENSTRUG00000007996csde110073.992ENSSARG00000000738CSDE19473.992Sorex_araneus
ENSTRUG00000007996csde110077.314ENSSPUG00000008714CSDE110077.314Sphenodon_punctatus
ENSTRUG00000007996csde110088.281ENSSPAG00000000716csde110088.281Stegastes_partitus
ENSTRUG00000007996csde110074.902ENSSSCG00000006752CSDE110074.902Sus_scrofa
ENSTRUG00000007996csde110073.000ENSTGUG00000000972CSDE110073.000Taeniopygia_guttata
ENSTRUG00000007996csde19385.057ENSTNIG00000010878csde110085.057Tetraodon_nigroviridis
ENSTRUG00000007996csde19277.301ENSTBEG00000011880-5677.301Tupaia_belangeri
ENSTRUG00000007996csde110073.992ENSTTRG00000015583CSDE19473.992Tursiops_truncatus
ENSTRUG00000007996csde19381.107ENSUAMG00000021779-9881.107Ursus_americanus
ENSTRUG00000007996csde19070.626ENSUAMG00000024289-9970.626Ursus_americanus
ENSTRUG00000007996csde110068.531ENSUMAG00000009720-9768.531Ursus_maritimus
ENSTRUG00000007996csde18668.646ENSUMAG00000011714-9968.646Ursus_maritimus
ENSTRUG00000007996csde110078.605ENSVPAG00000000749CSDE17978.605Vicugna_pacos
ENSTRUG00000007996csde19371.283ENSVVUG00000009890CSDE19471.283Vulpes_vulpes
ENSTRUG00000007996csde110073.225ENSXETG00000021448csde110073.225Xenopus_tropicalis
ENSTRUG00000007996csde19390.850ENSXCOG00000000035csde18990.850Xiphophorus_couchianus
ENSTRUG00000007996csde19885.809ENSXMAG00000009080csde19885.809Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us