EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000007998 (Gene tree)
Gene ID: -
Gene Symbol: mecom
Alias: evi1|im:7140716|prdm3
Full Name: MDS1 and EVI1 complex locus
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 17815 bases
Position: chrHE591604.1:268474-286288
Accession: 101069476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000019910	zf-C2H2	PF00096.26	2.4e-37	1	6
ENSTRUP00000019910	zf-C2H2	PF00096.26	2.4e-37	2	6
ENSTRUP00000019910	zf-C2H2	PF00096.26	2.4e-37	3	6
ENSTRUP00000019910	zf-C2H2	PF00096.26	2.4e-37	4	6
ENSTRUP00000019910	zf-C2H2	PF00096.26	2.4e-37	5	6
ENSTRUP00000019910	zf-C2H2	PF00096.26	2.4e-37	6	6
ENSTRUP00000019910	zf-met	PF12874.7	7.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000019991	-	2172	XM_011618071	ENSTRUP00000019910	723 (aa)	XP_011616373	H2T5H1

Gene Model

Click here to download ENSTRUG00000007998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000007998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000007998	mecom	50	43.529	ENSTRUG00000022076	-	96	43.529
ENSTRUG00000007998	mecom	66	42.708	ENSTRUG00000015687	-	89	47.170
ENSTRUG00000007998	mecom	66	45.455	ENSTRUG00000017456	znf236	63	45.455
ENSTRUG00000007998	mecom	63	43.077	ENSTRUG00000025597	znf646	54	43.077
ENSTRUG00000007998	mecom	50	44.828	ENSTRUG00000019483	-	93	44.828
ENSTRUG00000007998	mecom	64	39.744	ENSTRUG00000012157	-	87	39.744
ENSTRUG00000007998	mecom	55	41.379	ENSTRUG00000023491	-	68	41.379
ENSTRUG00000007998	mecom	52	47.059	ENSTRUG00000019685	znf319b	79	47.059
ENSTRUG00000007998	mecom	69	37.383	ENSTRUG00000005321	-	95	43.421
ENSTRUG00000007998	mecom	53	38.636	ENSTRUG00000014476	-	77	38.636
ENSTRUG00000007998	mecom	55	43.750	ENSTRUG00000013850	prdm5	89	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000007998	mecom	97	77.695	ENSLBEG00000005011	mecom	78	83.420	Labrus_bergylta
ENSTRUG00000007998	mecom	96	80.000	ENSMAMG00000004665	mecom	69	87.027	Mastacembelus_armatus
ENSTRUG00000007998	mecom	87	87.027	ENSMALG00000008480	mecom	70	87.027	Monopterus_albus
ENSTRUG00000007998	mecom	90	78.846	ENSORLG00000012077	mecom	64	78.846	Oryzias_latipes