EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000008028 (Gene tree)
Gene ID: 101062362
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 14572 bases
Position: chrHE591497.1:834254-848825
Accession: 101062362
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000019994	AARP2CN	PF08142.12	4.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000020075	-	4192	XM_011618037	ENSTRUP00000019994	1175 (aa)	XP_011616339	H2T5Q5

Gene Model

Click here to download ENSTRUG00000008028's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000008028's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000008028	bms1	97	64.173	ENSG00000165733	BMS1	86	64.943	Homo_sapiens
ENSTRUG00000008028	bms1	78	75.917	ENSAPOG00000002296	bms1	99	71.172	Acanthochromis_polyacanthus
ENSTRUG00000008028	bms1	99	63.020	ENSAMEG00000016834	BMS1	87	64.160	Ailuropoda_melanoleuca
ENSTRUG00000008028	bms1	99	68.806	ENSACIG00000002588	bms1	99	69.554	Amphilophus_citrinellus
ENSTRUG00000008028	bms1	53	75.566	ENSAOCG00000018088	bms1	99	72.286	Amphiprion_ocellaris
ENSTRUG00000008028	bms1	53	75.321	ENSAPEG00000014673	bms1	99	72.323	Amphiprion_percula
ENSTRUG00000008028	bms1	99	71.405	ENSATEG00000023465	bms1	99	72.379	Anabas_testudineus
ENSTRUG00000008028	bms1	95	62.876	ENSAPLG00000003759	BMS1	86	65.708	Anas_platyrhynchos
ENSTRUG00000008028	bms1	99	62.571	ENSACAG00000004537	-	86	64.766	Anolis_carolinensis
ENSTRUG00000008028	bms1	89	70.439	ENSANAG00000023432	BMS1	86	64.563	Aotus_nancymaae
ENSTRUG00000008028	bms1	99	70.657	ENSACLG00000001294	bms1	99	71.000	Astatotilapia_calliptera
ENSTRUG00000008028	bms1	88	76.498	ENSAMXG00000011236	bms1	92	69.111	Astyanax_mexicanus
ENSTRUG00000008028	bms1	97	64.062	ENSBTAG00000012878	BMS1	86	65.378	Bos_taurus
ENSTRUG00000008028	bms1	85	54.040	WBGene00022021	Y61A9LA.10	93	56.749	Caenorhabditis_elegans
ENSTRUG00000008028	bms1	97	63.509	ENSCJAG00000021705	BMS1	86	65.049	Callithrix_jacchus
ENSTRUG00000008028	bms1	98	63.636	ENSCAFG00000007114	BMS1	86	64.309	Canis_familiaris
ENSTRUG00000008028	bms1	98	63.636	ENSCAFG00020025282	BMS1	86	64.309	Canis_lupus_dingo
ENSTRUG00000008028	bms1	97	64.531	ENSCHIG00000023251	BMS1	86	65.862	Capra_hircus
ENSTRUG00000008028	bms1	99	62.644	ENSCAPG00000008652	BMS1	86	62.322	Cavia_aperea
ENSTRUG00000008028	bms1	99	63.602	ENSCPOG00000000502	BMS1	87	64.620	Cavia_porcellus
ENSTRUG00000008028	bms1	90	55.448	ENSCCAG00000024969	-	86	55.105	Cebus_capucinus
ENSTRUG00000008028	bms1	79	50.493	ENSCATG00000008695	-	78	54.031	Cercocebus_atys
ENSTRUG00000008028	bms1	97	63.651	ENSCATG00000030625	-	86	64.782	Cercocebus_atys
ENSTRUG00000008028	bms1	95	65.184	ENSCLAG00000002446	BMS1	87	64.859	Chinchilla_lanigera
ENSTRUG00000008028	bms1	97	63.807	ENSCSAG00000011118	BMS1	86	64.943	Chlorocebus_sabaeus
ENSTRUG00000008028	bms1	92	68.894	ENSCHOG00000011055	BMS1	86	64.734	Choloepus_hoffmanni
ENSTRUG00000008028	bms1	98	65.049	ENSCPBG00000025581	BMS1	89	64.308	Chrysemys_picta_bellii
ENSTRUG00000008028	bms1	84	61.440	ENSCING00000003181	-	92	63.989	Ciona_intestinalis
ENSTRUG00000008028	bms1	56	68.826	ENSCSAVG00000004113	-	88	53.009	Ciona_savignyi
ENSTRUG00000008028	bms1	97	65.157	ENSCANG00000011609	BMS1	86	64.943	Colobus_angolensis_palliatus
ENSTRUG00000008028	bms1	98	64.343	ENSCGRG00001019461	Bms1	88	63.968	Cricetulus_griseus_chok1gshd
ENSTRUG00000008028	bms1	98	64.343	ENSCGRG00000009016	Bms1	88	63.968	Cricetulus_griseus_crigri
ENSTRUG00000008028	bms1	53	71.683	ENSCSEG00000002469	bms1	99	68.613	Cynoglossus_semilaevis
ENSTRUG00000008028	bms1	98	73.524	ENSCVAG00000008371	bms1	99	73.435	Cyprinodon_variegatus
ENSTRUG00000008028	bms1	99	65.928	ENSDARG00000054154	bms1	99	66.558	Danio_rerio
ENSTRUG00000008028	bms1	99	63.039	ENSDNOG00000015761	BMS1	87	64.458	Dasypus_novemcinctus
ENSTRUG00000008028	bms1	95	64.620	ENSDORG00000002982	Bms1	86	64.943	Dipodomys_ordii
ENSTRUG00000008028	bms1	80	68.203	ENSETEG00000009554	BMS1	76	62.551	Echinops_telfairi
ENSTRUG00000008028	bms1	98	62.121	ENSEASG00005006894	BMS1	87	64.372	Equus_asinus_asinus
ENSTRUG00000008028	bms1	99	63.867	ENSECAG00000001358	BMS1	87	64.575	Equus_caballus
ENSTRUG00000008028	bms1	99	67.102	ENSELUG00000001756	bms1	97	68.399	Esox_lucius
ENSTRUG00000008028	bms1	99	69.746	ENSFCAG00000011220	BMS1	86	64.687	Felis_catus
ENSTRUG00000008028	bms1	95	63.813	ENSFALG00000006882	BMS1	84	64.919	Ficedula_albicollis
ENSTRUG00000008028	bms1	99	62.715	ENSFDAG00000001422	BMS1	86	63.826	Fukomys_damarensis
ENSTRUG00000008028	bms1	97	73.766	ENSFHEG00000003367	bms1	97	73.830	Fundulus_heteroclitus
ENSTRUG00000008028	bms1	98	66.210	ENSGMOG00000000718	bms1	97	65.739	Gadus_morhua
ENSTRUG00000008028	bms1	89	70.602	ENSGALG00000002624	BMS1	86	64.000	Gallus_gallus
ENSTRUG00000008028	bms1	99	75.566	ENSGACG00000015334	bms1	92	74.716	Gasterosteus_aculeatus
ENSTRUG00000008028	bms1	97	64.459	ENSGAGG00000003467	BMS1	90	64.948	Gopherus_agassizii
ENSTRUG00000008028	bms1	99	70.691	ENSHBUG00000022628	bms1	99	70.868	Haplochromis_burtoni
ENSTRUG00000008028	bms1	99	63.039	ENSHGLG00000000477	BMS1	87	64.330	Heterocephalus_glaber_female
ENSTRUG00000008028	bms1	99	63.396	ENSHGLG00100002176	BMS1	87	64.315	Heterocephalus_glaber_male
ENSTRUG00000008028	bms1	99	71.793	ENSHCOG00000017604	bms1	99	71.514	Hippocampus_comes
ENSTRUG00000008028	bms1	53	76.923	ENSIPUG00000017855	bms1	99	65.008	Ictalurus_punctatus
ENSTRUG00000008028	bms1	99	64.637	ENSSTOG00000015063	BMS1	86	65.164	Ictidomys_tridecemlineatus
ENSTRUG00000008028	bms1	92	70.968	ENSJJAG00000017328	Bms1	86	64.669	Jaculus_jaculus
ENSTRUG00000008028	bms1	64	67.315	ENSKMAG00000021982	bms1	97	66.797	Kryptolebias_marmoratus
ENSTRUG00000008028	bms1	97	63.077	ENSLACG00000001600	BMS1	87	64.948	Latimeria_chalumnae
ENSTRUG00000008028	bms1	53	68.790	ENSLOCG00000012914	bms1	97	65.970	Lepisosteus_oculatus
ENSTRUG00000008028	bms1	99	62.235	ENSLAFG00000006250	BMS1	87	63.826	Loxodonta_africana
ENSTRUG00000008028	bms1	88	63.477	ENSMFAG00000037771	BMS1	96	63.673	Macaca_fascicularis
ENSTRUG00000008028	bms1	88	57.090	ENSMMUG00000007426	-	83	59.481	Macaca_mulatta
ENSTRUG00000008028	bms1	69	56.132	ENSMLEG00000029084	-	78	54.000	Mandrillus_leucophaeus
ENSTRUG00000008028	bms1	99	70.899	ENSMAMG00000020855	bms1	99	71.393	Mastacembelus_armatus
ENSTRUG00000008028	bms1	99	70.657	ENSMZEG00005005663	bms1	99	71.000	Maylandia_zebra
ENSTRUG00000008028	bms1	91	64.344	ENSMGAG00000001170	BMS1	87	64.579	Meleagris_gallopavo
ENSTRUG00000008028	bms1	98	63.762	ENSMAUG00000002195	Bms1	87	64.622	Mesocricetus_auratus
ENSTRUG00000008028	bms1	97	64.062	ENSMICG00000009977	BMS1	86	65.056	Microcebus_murinus
ENSTRUG00000008028	bms1	97	63.168	ENSMOCG00000002038	Bms1	87	63.813	Microtus_ochrogaster
ENSTRUG00000008028	bms1	99	75.635	ENSMMOG00000000977	bms1	99	74.682	Mola_mola
ENSTRUG00000008028	bms1	99	61.808	ENSMODG00000001177	BMS1	86	65.253	Monodelphis_domestica
ENSTRUG00000008028	bms1	99	71.488	ENSMALG00000009680	bms1	99	71.701	Monopterus_albus
ENSTRUG00000008028	bms1	82	57.443	MGP_CAROLIEiJ_G0028785	-	78	73.016	Mus_caroli
ENSTRUG00000008028	bms1	88	70.118	ENSMUSG00000030138	Bms1	87	64.170	Mus_musculus
ENSTRUG00000008028	bms1	94	63.944	MGP_PahariEiJ_G0022539	Bms1	87	63.340	Mus_pahari
ENSTRUG00000008028	bms1	94	63.564	MGP_SPRETEiJ_G0029816	Bms1	87	63.968	Mus_spretus
ENSTRUG00000008028	bms1	97	64.062	ENSMPUG00000017276	BMS1	87	64.791	Mustela_putorius_furo
ENSTRUG00000008028	bms1	96	63.688	ENSMLUG00000003260	BMS1	87	65.510	Myotis_lucifugus
ENSTRUG00000008028	bms1	91	64.459	ENSNGAG00000015258	Bms1	81	64.459	Nannospalax_galili
ENSTRUG00000008028	bms1	97	63.189	ENSNLEG00000015791	BMS1	86	64.066	Nomascus_leucogenys
ENSTRUG00000008028	bms1	86	72.794	ENSOPRG00000005195	BMS1	78	74.670	Ochotona_princeps
ENSTRUG00000008028	bms1	97	62.246	ENSODEG00000005554	BMS1	87	63.581	Octodon_degus
ENSTRUG00000008028	bms1	99	71.595	ENSONIG00000007227	bms1	99	71.333	Oreochromis_niloticus
ENSTRUG00000008028	bms1	97	61.877	ENSOANG00000000662	-	87	63.265	Ornithorhynchus_anatinus
ENSTRUG00000008028	bms1	95	64.961	ENSOCUG00000005354	BMS1	86	65.113	Oryctolagus_cuniculus
ENSTRUG00000008028	bms1	99	73.019	ENSORLG00000014655	bms1	99	73.142	Oryzias_latipes
ENSTRUG00000008028	bms1	52	76.059	ENSORLG00020016246	bms1	99	70.981	Oryzias_latipes_hni
ENSTRUG00000008028	bms1	52	75.570	ENSORLG00015014183	bms1	99	71.878	Oryzias_latipes_hsok
ENSTRUG00000008028	bms1	99	72.957	ENSOMEG00000015042	bms1	99	72.811	Oryzias_melastigma
ENSTRUG00000008028	bms1	97	63.027	ENSOGAG00000006511	BMS1	86	65.267	Otolemur_garnettii
ENSTRUG00000008028	bms1	97	64.531	ENSOARG00000003900	BMS1	86	65.862	Ovis_aries
ENSTRUG00000008028	bms1	97	64.173	ENSPPAG00000027837	BMS1	86	65.092	Pan_paniscus
ENSTRUG00000008028	bms1	99	63.566	ENSPPRG00000001311	BMS1	86	64.687	Panthera_pardus
ENSTRUG00000008028	bms1	99	63.548	ENSPTIG00000009652	BMS1	86	64.330	Panthera_tigris_altaica
ENSTRUG00000008028	bms1	97	64.173	ENSPTRG00000002441	BMS1	86	65.161	Pan_troglodytes
ENSTRUG00000008028	bms1	95	69.808	ENSPKIG00000008165	bms1	86	70.288	Paramormyrops_kingsleyae
ENSTRUG00000008028	bms1	97	64.844	ENSPSIG00000006481	BMS1	87	66.129	Pelodiscus_sinensis
ENSTRUG00000008028	bms1	94	64.516	ENSPEMG00000022467	Bms1	86	64.008	Peromyscus_maniculatus_bairdii
ENSTRUG00000008028	bms1	96	64.791	ENSPCIG00000001339	BMS1	84	69.577	Phascolarctos_cinereus
ENSTRUG00000008028	bms1	94	75.285	ENSPFOG00000015180	bms1	99	71.361	Poecilia_formosa
ENSTRUG00000008028	bms1	98	73.271	ENSPMEG00000023176	bms1	94	72.811	Poecilia_mexicana
ENSTRUG00000008028	bms1	98	73.185	ENSPREG00000002695	bms1	99	72.957	Poecilia_reticulata
ENSTRUG00000008028	bms1	66	73.469	ENSPCAG00000014528	BMS1	75	62.628	Procavia_capensis
ENSTRUG00000008028	bms1	94	63.956	ENSPCOG00000023834	-	87	63.011	Propithecus_coquereli
ENSTRUG00000008028	bms1	99	63.725	ENSPVAG00000000725	BMS1	87	63.692	Pteropus_vampyrus
ENSTRUG00000008028	bms1	99	69.483	ENSPNYG00000018866	bms1	99	69.136	Pundamilia_nyererei
ENSTRUG00000008028	bms1	53	67.481	ENSPNAG00000000676	bms1	92	70.616	Pygocentrus_nattereri
ENSTRUG00000008028	bms1	77	62.840	ENSRNOG00000006576	Bms1	90	63.618	Rattus_norvegicus
ENSTRUG00000008028	bms1	97	63.651	ENSRROG00000040101	BMS1	86	64.782	Rhinopithecus_roxellana
ENSTRUG00000008028	bms1	89	70.208	ENSSBOG00000035778	BMS1	90	64.139	Saimiri_boliviensis_boliviensis
ENSTRUG00000008028	bms1	98	63.158	ENSSHAG00000005062	BMS1	86	63.872	Sarcophilus_harrisii
ENSTRUG00000008028	bms1	97	71.429	ENSSFOG00015022313	bms1	89	72.903	Scleropages_formosus
ENSTRUG00000008028	bms1	99	69.399	ENSSMAG00000019966	bms1	99	70.227	Scophthalmus_maximus
ENSTRUG00000008028	bms1	52	76.414	ENSSDUG00000016875	bms1	99	72.150	Seriola_dumerili
ENSTRUG00000008028	bms1	99	72.204	ENSSLDG00000015199	bms1	99	71.232	Seriola_lalandi_dorsalis
ENSTRUG00000008028	bms1	52	68.000	ENSSARG00000014407	BMS1	67	68.000	Sorex_araneus
ENSTRUG00000008028	bms1	99	63.826	ENSSPUG00000014454	BMS1	85	67.220	Sphenodon_punctatus
ENSTRUG00000008028	bms1	97	65.497	ENSSSCG00000010198	BMS1	90	65.447	Sus_scrofa
ENSTRUG00000008028	bms1	95	63.813	ENSTGUG00000006302	-	85	64.671	Taeniopygia_guttata
ENSTRUG00000008028	bms1	99	85.489	ENSTNIG00000006216	bms1	93	85.489	Tetraodon_nigroviridis
ENSTRUG00000008028	bms1	65	64.726	ENSTBEG00000001673	-	63	63.366	Tupaia_belangeri
ENSTRUG00000008028	bms1	98	63.354	ENSTTRG00000007983	BMS1	78	75.532	Tursiops_truncatus
ENSTRUG00000008028	bms1	92	70.276	ENSUAMG00000023996	BMS1	87	64.791	Ursus_americanus
ENSTRUG00000008028	bms1	92	70.276	ENSUMAG00000016523	BMS1	87	64.469	Ursus_maritimus
ENSTRUG00000008028	bms1	73	69.752	ENSVPAG00000007477	BMS1	80	69.841	Vicugna_pacos
ENSTRUG00000008028	bms1	98	63.636	ENSVVUG00000021305	BMS1	88	64.242	Vulpes_vulpes
ENSTRUG00000008028	bms1	93	64.538	ENSXETG00000008158	bms1	99	59.622	Xenopus_tropicalis
ENSTRUG00000008028	bms1	98	71.309	ENSXCOG00000000506	bms1	94	86.146	Xiphophorus_couchianus
ENSTRUG00000008028	bms1	98	73.225	ENSXMAG00000014236	bms1	99	73.350	Xiphophorus_maculatus