EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000008105 (Gene tree)
Gene ID: 101070917
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 11884 bases
Position: chr14:11790782-11802665
Accession: 101070917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000020243	Nucleoplasmin	PF03066.15	7.2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000020327	-	3299	XM_011610992	ENSTRUP00000020243	308 (aa)	XP_011609294	H2T6F4

Gene Model

Click here to download ENSTRUG00000008105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000008105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000008105	npm1b	91	39.863	ENSTRUG00000024003	npm1a	96	39.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000008105	npm1b	95	76.254	ENSAPOG00000004268	npm1b	100	77.592	Acanthochromis_polyacanthus
ENSTRUG00000008105	npm1b	95	77.852	ENSAOCG00000012549	npm1b	100	78.188	Amphiprion_ocellaris
ENSTRUG00000008105	npm1b	95	78.305	ENSAPEG00000000868	npm1b	100	79.054	Amphiprion_percula
ENSTRUG00000008105	npm1b	95	79.402	ENSATEG00000006254	npm1b	100	79.734	Anabas_testudineus
ENSTRUG00000008105	npm1b	91	44.218	ENSACAG00000015626	-	96	45.205	Anolis_carolinensis
ENSTRUG00000008105	npm1b	94	62.712	ENSAMXG00000042148	npm1b	99	62.712	Astyanax_mexicanus
ENSTRUG00000008105	npm1b	92	45.424	ENSCPBG00000021221	-	58	46.918	Chrysemys_picta_bellii
ENSTRUG00000008105	npm1b	95	74.419	ENSCSEG00000004530	npm1b	100	74.419	Cynoglossus_semilaevis
ENSTRUG00000008105	npm1b	95	71.429	ENSCVAG00000013016	npm1b	100	72.757	Cyprinodon_variegatus
ENSTRUG00000008105	npm1b	94	63.455	ENSDARG00000037675	npm1b	99	62.752	Danio_rerio
ENSTRUG00000008105	npm1b	95	60.784	ENSELUG00000022123	npm1b	99	59.804	Esox_lucius
ENSTRUG00000008105	npm1b	89	45.965	ENSFALG00000003320	-	94	46.429	Ficedula_albicollis
ENSTRUG00000008105	npm1b	95	68.977	ENSFHEG00000020794	npm1b	100	70.627	Fundulus_heteroclitus
ENSTRUG00000008105	npm1b	94	59.797	ENSGMOG00000002689	npm1b	100	60.135	Gadus_morhua
ENSTRUG00000008105	npm1b	94	45.485	ENSGALG00000002197	-	73	45.485	Gallus_gallus
ENSTRUG00000008105	npm1b	95	67.667	ENSGAFG00000017709	npm1b	100	70.667	Gambusia_affinis
ENSTRUG00000008105	npm1b	94	77.320	ENSGACG00000016706	npm1b	100	78.007	Gasterosteus_aculeatus
ENSTRUG00000008105	npm1b	91	46.233	ENSGAGG00000020250	-	96	44.521	Gopherus_agassizii
ENSTRUG00000008105	npm1b	96	71.711	ENSHBUG00000019903	npm1b	96	74.013	Haplochromis_burtoni
ENSTRUG00000008105	npm1b	95	69.565	ENSHCOG00000003895	npm1b	100	69.565	Hippocampus_comes
ENSTRUG00000008105	npm1b	94	57.667	ENSIPUG00000020165	npm1b	99	57.667	Ictalurus_punctatus
ENSTRUG00000008105	npm1b	94	72.542	ENSKMAG00000008260	npm1b	99	74.662	Kryptolebias_marmoratus
ENSTRUG00000008105	npm1b	91	36.237	ENSLACG00000013460	-	100	36.789	Latimeria_chalumnae
ENSTRUG00000008105	npm1b	89	42.333	ENSLACG00000001779	-	100	42.857	Latimeria_chalumnae
ENSTRUG00000008105	npm1b	89	45.608	ENSLOCG00000001942	npm1b	100	47.315	Lepisosteus_oculatus
ENSTRUG00000008105	npm1b	68	71.946	ENSMAMG00000015335	npm1b	100	71.041	Mastacembelus_armatus
ENSTRUG00000008105	npm1b	88	45.848	ENSMGAG00000001591	-	100	45.848	Meleagris_gallopavo
ENSTRUG00000008105	npm1b	77	77.459	ENSMALG00000015383	npm1b	100	76.639	Monopterus_albus
ENSTRUG00000008105	npm1b	95	69.153	ENSONIG00000001397	npm1b	99	70.261	Oreochromis_niloticus
ENSTRUG00000008105	npm1b	95	62.585	ENSOMEG00000003414	npm1b	100	62.373	Oryzias_melastigma
ENSTRUG00000008105	npm1b	95	57.282	ENSPKIG00000020050	npm1b	99	57.282	Paramormyrops_kingsleyae
ENSTRUG00000008105	npm1b	91	45.704	ENSPSIG00000011204	-	92	44.097	Pelodiscus_sinensis
ENSTRUG00000008105	npm1b	83	38.433	ENSPMAG00000004930	npm1b	99	38.947	Petromyzon_marinus
ENSTRUG00000008105	npm1b	95	70.100	ENSPFOG00000018357	npm1b	100	70.764	Poecilia_formosa
ENSTRUG00000008105	npm1b	94	61.356	ENSPNAG00000005498	npm1b	99	61.356	Pygocentrus_nattereri
ENSTRUG00000008105	npm1b	92	60.900	ENSSFOG00015005064	npm1b	98	60.417	Scleropages_formosus
ENSTRUG00000008105	npm1b	95	77.181	ENSSMAG00000008088	npm1b	100	78.188	Scophthalmus_maximus
ENSTRUG00000008105	npm1b	95	80.333	ENSSDUG00000007726	npm1b	100	80.333	Seriola_dumerili
ENSTRUG00000008105	npm1b	95	80.333	ENSSLDG00000021396	npm1b	100	80.333	Seriola_lalandi_dorsalis
ENSTRUG00000008105	npm1b	95	77.592	ENSSPAG00000011152	npm1b	100	77.926	Stegastes_partitus
ENSTRUG00000008105	npm1b	88	45.583	ENSTGUG00000014970	-	100	45.583	Taeniopygia_guttata
ENSTRUG00000008105	npm1b	95	85.085	ENSTNIG00000013057	npm1b	100	85.085	Tetraodon_nigroviridis
ENSTRUG00000008105	npm1b	91	42.361	ENSXETG00000008403	npm1	95	42.361	Xenopus_tropicalis
ENSTRUG00000008105	npm1b	95	70.764	ENSXMAG00000001986	npm1b	100	72.757	Xiphophorus_maculatus