EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000008173 (Gene tree)
Gene ID: 101074867
Gene Symbol: urb2
Alias: fc13e02|si:dkey-162b3.2|wu:fc13e02
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 17122 bases
Position: chr13:3401659-3418780
Accession: 101074867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000053896	Urb2	PF10441.9	1.7e-16	1	1
ENSTRUP00000020452	Urb2	PF10441.9	1.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000020537	-	7804	XM_011609613	ENSTRUP00000020452	1649 (aa)	XP_011607915	H2T713
ENSTRUT00000058554	-	7729	-	ENSTRUP00000053896	1624 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000008173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000008173's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000008173	urb2	99	34.618	ENSG00000135763	URB2	99	61.905	Homo_sapiens
ENSTRUG00000008173	urb2	92	59.614	ENSAPOG00000000608	urb2	100	59.614	Acanthochromis_polyacanthus
ENSTRUG00000008173	urb2	100	34.444	ENSAMEG00000009206	URB2	100	34.284	Ailuropoda_melanoleuca
ENSTRUG00000008173	urb2	100	61.056	ENSAOCG00000019961	urb2	100	61.290	Amphiprion_ocellaris
ENSTRUG00000008173	urb2	100	61.173	ENSAPEG00000005263	urb2	100	61.408	Amphiprion_percula
ENSTRUG00000008173	urb2	100	60.070	ENSATEG00000020930	urb2	100	60.188	Anabas_testudineus
ENSTRUG00000008173	urb2	97	33.596	ENSAPLG00000002998	URB2	99	33.696	Anas_platyrhynchos
ENSTRUG00000008173	urb2	99	35.798	ENSACAG00000001285	URB2	99	35.920	Anolis_carolinensis
ENSTRUG00000008173	urb2	99	35.273	ENSANAG00000033963	URB2	99	35.039	Aotus_nancymaae
ENSTRUG00000008173	urb2	92	58.728	ENSACLG00000009254	urb2	100	58.728	Astatotilapia_calliptera
ENSTRUG00000008173	urb2	99	39.809	ENSAMXG00000003474	urb2	99	39.809	Astyanax_mexicanus
ENSTRUG00000008173	urb2	100	33.630	ENSBTAG00000010180	URB2	100	33.393	Bos_taurus
ENSTRUG00000008173	urb2	95	62.411	ENSCJAG00000010968	URB2	99	62.411	Callithrix_jacchus
ENSTRUG00000008173	urb2	99	34.146	ENSCAFG00000012118	URB2	99	33.967	Canis_familiaris
ENSTRUG00000008173	urb2	95	32.617	ENSCAFG00020027217	URB2	98	32.417	Canis_lupus_dingo
ENSTRUG00000008173	urb2	100	33.550	ENSCHIG00000014513	URB2	100	33.314	Capra_hircus
ENSTRUG00000008173	urb2	100	33.690	ENSTSYG00000006924	URB2	100	33.730	Carlito_syrichta
ENSTRUG00000008173	urb2	60	40.054	ENSCPOG00000020777	-	99	40.054	Cavia_porcellus
ENSTRUG00000008173	urb2	99	35.151	ENSCCAG00000023932	URB2	99	34.816	Cebus_capucinus
ENSTRUG00000008173	urb2	99	34.855	ENSCATG00000043366	URB2	99	34.813	Cercocebus_atys
ENSTRUG00000008173	urb2	99	34.514	ENSCLAG00000006268	URB2	99	34.456	Chinchilla_lanigera
ENSTRUG00000008173	urb2	99	34.659	ENSCSAG00000010599	URB2	99	34.458	Chlorocebus_sabaeus
ENSTRUG00000008173	urb2	65	53.670	ENSCHOG00000010163	URB2	64	53.670	Choloepus_hoffmanni
ENSTRUG00000008173	urb2	99	36.790	ENSCPBG00000006191	URB2	99	36.759	Chrysemys_picta_bellii
ENSTRUG00000008173	urb2	99	34.581	ENSCANG00000023711	URB2	99	34.381	Colobus_angolensis_palliatus
ENSTRUG00000008173	urb2	99	34.542	ENSCGRG00001009591	Urb2	99	34.366	Cricetulus_griseus_chok1gshd
ENSTRUG00000008173	urb2	99	34.542	ENSCGRG00000011259	Urb2	99	34.366	Cricetulus_griseus_crigri
ENSTRUG00000008173	urb2	100	49.554	ENSCSEG00000000299	urb2	100	49.111	Cynoglossus_semilaevis
ENSTRUG00000008173	urb2	100	53.874	ENSCVAG00000011011	urb2	100	54.052	Cyprinodon_variegatus
ENSTRUG00000008173	urb2	100	41.551	ENSDARG00000003217	urb2	100	70.297	Danio_rerio
ENSTRUG00000008173	urb2	91	38.539	ENSDNOG00000043064	URB2	99	30.877	Dasypus_novemcinctus
ENSTRUG00000008173	urb2	99	33.115	ENSDORG00000014975	Urb2	99	32.836	Dipodomys_ordii
ENSTRUG00000008173	urb2	95	39.437	ENSETEG00000002869	URB2	95	39.437	Echinops_telfairi
ENSTRUG00000008173	urb2	100	35.033	ENSEASG00005012060	URB2	100	34.917	Equus_asinus_asinus
ENSTRUG00000008173	urb2	93	62.937	ENSECAG00000012338	URB2	99	62.937	Equus_caballus
ENSTRUG00000008173	urb2	93	58.865	ENSEEUG00000002669	URB2	92	59.574	Erinaceus_europaeus
ENSTRUG00000008173	urb2	100	46.856	ENSELUG00000014647	urb2	100	46.971	Esox_lucius
ENSTRUG00000008173	urb2	100	34.046	ENSFCAG00000007662	URB2	100	33.849	Felis_catus
ENSTRUG00000008173	urb2	99	35.516	ENSFALG00000003385	URB2	99	35.516	Ficedula_albicollis
ENSTRUG00000008173	urb2	99	34.248	ENSFDAG00000021079	URB2	99	34.411	Fukomys_damarensis
ENSTRUG00000008173	urb2	100	55.045	ENSFHEG00000010357	urb2	100	54.985	Fundulus_heteroclitus
ENSTRUG00000008173	urb2	99	48.744	ENSGMOG00000012459	urb2	100	48.445	Gadus_morhua
ENSTRUG00000008173	urb2	99	35.111	ENSGALG00000011101	URB2	99	35.346	Gallus_gallus
ENSTRUG00000008173	urb2	100	58.749	ENSGACG00000016179	urb2	100	58.990	Gasterosteus_aculeatus
ENSTRUG00000008173	urb2	99	37.471	ENSGAGG00000021879	URB2	99	37.559	Gopherus_agassizii
ENSTRUG00000008173	urb2	99	34.698	ENSGGOG00000025643	URB2	99	34.340	Gorilla_gorilla
ENSTRUG00000008173	urb2	100	59.656	ENSHBUG00000018469	urb2	100	59.656	Haplochromis_burtoni
ENSTRUG00000008173	urb2	97	33.516	ENSHGLG00000016561	URB2	99	33.232	Heterocephalus_glaber_female
ENSTRUG00000008173	urb2	89	36.141	ENSHGLG00100001838	URB2	91	38.710	Heterocephalus_glaber_male
ENSTRUG00000008173	urb2	100	41.289	ENSIPUG00000020315	urb2	100	41.155	Ictalurus_punctatus
ENSTRUG00000008173	urb2	99	33.035	ENSSTOG00000025323	URB2	99	33.075	Ictidomys_tridecemlineatus
ENSTRUG00000008173	urb2	99	33.886	ENSJJAG00000011998	Urb2	99	33.571	Jaculus_jaculus
ENSTRUG00000008173	urb2	100	55.477	ENSKMAG00000020129	urb2	100	55.713	Kryptolebias_marmoratus
ENSTRUG00000008173	urb2	99	37.250	ENSLACG00000002038	URB2	99	37.222	Latimeria_chalumnae
ENSTRUG00000008173	urb2	100	41.795	ENSLOCG00000015462	urb2	100	41.855	Lepisosteus_oculatus
ENSTRUG00000008173	urb2	99	33.751	ENSLAFG00000012484	URB2	100	33.393	Loxodonta_africana
ENSTRUG00000008173	urb2	99	34.736	ENSMFAG00000039905	URB2	99	34.536	Macaca_fascicularis
ENSTRUG00000008173	urb2	99	34.855	ENSMMUG00000009509	URB2	99	34.654	Macaca_mulatta
ENSTRUG00000008173	urb2	99	34.855	ENSMNEG00000038762	URB2	99	34.654	Macaca_nemestrina
ENSTRUG00000008173	urb2	99	34.914	ENSMLEG00000043252	URB2	99	34.713	Mandrillus_leucophaeus
ENSTRUG00000008173	urb2	100	58.768	ENSMAMG00000020365	urb2	100	58.768	Mastacembelus_armatus
ENSTRUG00000008173	urb2	100	59.834	ENSMZEG00005011027	urb2	100	59.775	Maylandia_zebra
ENSTRUG00000008173	urb2	96	32.474	ENSMGAG00000012073	URB2	98	32.723	Meleagris_gallopavo
ENSTRUG00000008173	urb2	95	61.702	ENSMAUG00000017980	Urb2	99	61.702	Mesocricetus_auratus
ENSTRUG00000008173	urb2	100	35.116	ENSMICG00000033302	URB2	100	34.881	Microcebus_murinus
ENSTRUG00000008173	urb2	99	34.542	ENSMOCG00000020369	Urb2	99	34.401	Microtus_ochrogaster
ENSTRUG00000008173	urb2	100	60.836	ENSMALG00000006529	urb2	100	60.836	Monopterus_albus
ENSTRUG00000008173	urb2	99	34.129	ENSMUSG00000031976	Urb2	99	34.029	Mus_musculus
ENSTRUG00000008173	urb2	99	34.067	ENSMPUG00000012438	URB2	99	34.007	Mustela_putorius_furo
ENSTRUG00000008173	urb2	99	33.609	ENSNGAG00000016524	Urb2	99	34.010	Nannospalax_galili
ENSTRUG00000008173	urb2	99	34.360	ENSNLEG00000014450	URB2	99	34.184	Nomascus_leucogenys
ENSTRUG00000008173	urb2	91	44.186	ENSMEUG00000016434	URB2	93	44.186	Notamacropus_eugenii
ENSTRUG00000008173	urb2	90	76.190	ENSOPRG00000009906	URB2	86	76.190	Ochotona_princeps
ENSTRUG00000008173	urb2	99	35.227	ENSODEG00000005593	URB2	99	34.988	Octodon_degus
ENSTRUG00000008173	urb2	100	56.886	ENSONIG00000017078	urb2	100	56.886	Oreochromis_niloticus
ENSTRUG00000008173	urb2	96	49.689	ENSOANG00000013732	URB2	100	31.601	Ornithorhynchus_anatinus
ENSTRUG00000008173	urb2	100	33.750	ENSOCUG00000010700	URB2	100	33.670	Oryctolagus_cuniculus
ENSTRUG00000008173	urb2	100	53.603	ENSORLG00000010915	urb2	100	53.722	Oryzias_latipes
ENSTRUG00000008173	urb2	100	53.531	ENSORLG00020003361	urb2	100	53.650	Oryzias_latipes_hni
ENSTRUG00000008173	urb2	100	53.722	ENSORLG00015001534	urb2	100	53.722	Oryzias_latipes_hsok
ENSTRUG00000008173	urb2	100	54.551	ENSOMEG00000010076	urb2	100	54.848	Oryzias_melastigma
ENSTRUG00000008173	urb2	100	33.373	ENSOGAG00000003021	URB2	100	33.373	Otolemur_garnettii
ENSTRUG00000008173	urb2	100	33.432	ENSOARG00000003102	URB2	100	33.314	Ovis_aries
ENSTRUG00000008173	urb2	99	34.661	ENSPPAG00000040629	URB2	99	34.243	Pan_paniscus
ENSTRUG00000008173	urb2	100	33.670	ENSPPRG00000012767	URB2	100	33.472	Panthera_pardus
ENSTRUG00000008173	urb2	97	72.727	ENSPTIG00000012577	URB2	99	72.727	Panthera_tigris_altaica
ENSTRUG00000008173	urb2	99	34.721	ENSPTRG00000002092	URB2	99	34.243	Pan_troglodytes
ENSTRUG00000008173	urb2	99	33.906	ENSPANG00000002245	URB2	99	33.708	Papio_anubis
ENSTRUG00000008173	urb2	99	40.802	ENSPKIG00000005787	urb2	99	40.743	Paramormyrops_kingsleyae
ENSTRUG00000008173	urb2	99	35.765	ENSPSIG00000002690	URB2	99	35.748	Pelodiscus_sinensis
ENSTRUG00000008173	urb2	96	33.848	ENSPEMG00000019551	Urb2	100	33.827	Peromyscus_maniculatus_bairdii
ENSTRUG00000008173	urb2	99	34.563	ENSPCIG00000030071	URB2	99	34.226	Phascolarctos_cinereus
ENSTRUG00000008173	urb2	100	53.089	ENSPFOG00000014330	urb2	100	53.149	Poecilia_formosa
ENSTRUG00000008173	urb2	100	53.389	ENSPLAG00000014654	urb2	100	53.389	Poecilia_latipinna
ENSTRUG00000008173	urb2	100	53.569	ENSPMEG00000012356	urb2	100	53.569	Poecilia_mexicana
ENSTRUG00000008173	urb2	100	52.969	ENSPREG00000010268	urb2	100	52.969	Poecilia_reticulata
ENSTRUG00000008173	urb2	100	34.520	ENSPPYG00000000123	URB2	100	34.243	Pongo_abelii
ENSTRUG00000008173	urb2	100	35.193	ENSPCOG00000023537	URB2	100	35.018	Propithecus_coquereli
ENSTRUG00000008173	urb2	100	30.411	ENSPVAG00000002108	URB2	100	30.406	Pteropus_vampyrus
ENSTRUG00000008173	urb2	92	58.598	ENSPNYG00000016840	urb2	100	58.598	Pundamilia_nyererei
ENSTRUG00000008173	urb2	99	40.096	ENSPNAG00000013684	urb2	99	40.024	Pygocentrus_nattereri
ENSTRUG00000008173	urb2	99	33.769	ENSRNOG00000026853	Urb2	97	33.730	Rattus_norvegicus
ENSTRUG00000008173	urb2	99	34.700	ENSRBIG00000037937	URB2	99	34.499	Rhinopithecus_bieti
ENSTRUG00000008173	urb2	99	34.700	ENSRROG00000039854	URB2	99	34.499	Rhinopithecus_roxellana
ENSTRUG00000008173	urb2	99	34.716	ENSSBOG00000023055	URB2	99	34.458	Saimiri_boliviensis_boliviensis
ENSTRUG00000008173	urb2	99	34.366	ENSSHAG00000014735	URB2	99	34.125	Sarcophilus_harrisii
ENSTRUG00000008173	urb2	97	40.912	ENSSFOG00015015432	urb2	98	40.815	Scleropages_formosus
ENSTRUG00000008173	urb2	92	59.035	ENSSMAG00000004984	urb2	100	59.035	Scophthalmus_maximus
ENSTRUG00000008173	urb2	100	62.339	ENSSDUG00000000902	urb2	100	62.573	Seriola_dumerili
ENSTRUG00000008173	urb2	99	36.236	ENSSPUG00000018549	URB2	99	36.731	Sphenodon_punctatus
ENSTRUG00000008173	urb2	100	61.137	ENSSPAG00000013632	urb2	100	61.137	Stegastes_partitus
ENSTRUG00000008173	urb2	100	34.547	ENSSSCG00000010186	URB2	100	34.483	Sus_scrofa
ENSTRUG00000008173	urb2	99	36.234	ENSTGUG00000009990	URB2	99	36.412	Taeniopygia_guttata
ENSTRUG00000008173	urb2	94	69.114	ENSTNIG00000017689	urb2	98	69.017	Tetraodon_nigroviridis
ENSTRUG00000008173	urb2	98	78.571	ENSTTRG00000014864	URB2	95	78.571	Tursiops_truncatus
ENSTRUG00000008173	urb2	100	34.602	ENSUAMG00000015022	URB2	100	34.442	Ursus_americanus
ENSTRUG00000008173	urb2	100	34.542	ENSUMAG00000004728	URB2	100	34.382	Ursus_maritimus
ENSTRUG00000008173	urb2	54	61.972	ENSVPAG00000001750	-	51	61.972	Vicugna_pacos
ENSTRUG00000008173	urb2	99	34.304	ENSVVUG00000006747	URB2	99	34.145	Vulpes_vulpes
ENSTRUG00000008173	urb2	99	32.590	ENSXETG00000023331	urb2	99	32.512	Xenopus_tropicalis
ENSTRUG00000008173	urb2	100	53.417	ENSXMAG00000015059	urb2	100	53.417	Xiphophorus_maculatus