EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000008332 (Gene tree)
Gene ID: 101067317
Gene Symbol: -
Alias: -
Full Name: LUC7 like 3 pre-mRNA splicing factor
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 5057 bases
Position: chr5:5493836-5498892
Accession: 101067317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000020847	LUC7	PF03194.15	2.6e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000020934	-	2520	XM_003964541	ENSTRUP00000020847	477 (aa)	XP_003964590	H2T857

Gene Model

Click here to download ENSTRUG00000008332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000008332's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000008332	-	67	33.436	ENSTRUG00000016335	luc7l	65	37.826
ENSTRUG00000008332	-	78	32.360	ENSTRUG00000000039	zgc:158803	63	32.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000008332	-	52	95.984	ENSATEG00000024795	-	52	95.984	Anabas_testudineus
ENSTRUG00000008332	-	50	88.750	ENSDNOG00000035561	-	51	88.750	Dasypus_novemcinctus
ENSTRUG00000008332	-	52	94.758	ENSFHEG00000000347	-	52	94.758	Fundulus_heteroclitus
ENSTRUG00000008332	-	52	95.968	ENSMALG00000004346	-	52	95.968	Monopterus_albus
ENSTRUG00000008332	-	50	88.750	ENSMLUG00000005637	-	55	88.750	Myotis_lucifugus
ENSTRUG00000008332	-	57	35.636	ENSORLG00000004110	-	61	34.276	Oryzias_latipes
ENSTRUG00000008332	-	57	35.636	ENSORLG00020009379	-	61	34.276	Oryzias_latipes_hni
ENSTRUG00000008332	-	52	93.952	ENSORLG00020015293	-	53	93.952	Oryzias_latipes_hni
ENSTRUG00000008332	-	61	36.486	ENSPKIG00000007263	-	60	33.910	Paramormyrops_kingsleyae
ENSTRUG00000008332	-	52	94.758	ENSPFOG00000011916	-	51	94.758	Poecilia_formosa
ENSTRUG00000008332	-	52	94.758	ENSPMEG00000019118	-	51	94.758	Poecilia_mexicana
ENSTRUG00000008332	-	52	94.355	ENSPREG00000020837	-	57	94.355	Poecilia_reticulata