EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000008400 (Gene tree)
Gene ID: 101064514
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 6985 bases
Position: chrHE591726.1:180174-187158
Accession: 101064514
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000021029	TRM13	PF05206.14	4.9e-82	1	1
ENSTRUP00000021030	TRM13	PF05206.14	5.4e-82	1	1
ENSTRUP00000021030	zf-U11-48K	PF05253.12	2.6e-09	1	1
ENSTRUP00000021029	zf-U11-48K	PF05253.12	2.7e-09	1	1
ENSTRUP00000021029	zf-TRM13_CCCH	PF11722.8	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000021116	-	3474	XM_011618672	ENSTRUP00000021029	455 (aa)	XP_011616974	H2T8N9
ENSTRUT00000021117	-	4289	-	ENSTRUP00000021030	466 (aa)	-	H2T8P0

Gene Model

Click here to download ENSTRUG00000008400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000008400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000008400	trmt13	99	49.367	ENSG00000122435	TRMT13	95	49.356	Homo_sapiens
ENSTRUG00000008400	trmt13	98	62.828	ENSAPOG00000015131	trmt13	99	63.136	Acanthochromis_polyacanthus
ENSTRUG00000008400	trmt13	99	50.734	ENSAMEG00000008917	TRMT13	95	50.746	Ailuropoda_melanoleuca
ENSTRUG00000008400	trmt13	99	63.291	ENSACIG00000005804	trmt13	95	62.851	Amphilophus_citrinellus
ENSTRUG00000008400	trmt13	98	62.828	ENSAOCG00000023585	trmt13	99	62.933	Amphiprion_ocellaris
ENSTRUG00000008400	trmt13	98	63.232	ENSAPEG00000004025	trmt13	99	63.340	Amphiprion_percula
ENSTRUG00000008400	trmt13	98	64.807	ENSATEG00000006597	trmt13	95	65.152	Anabas_testudineus
ENSTRUG00000008400	trmt13	89	52.941	ENSAPLG00000014924	TRMT13	98	52.941	Anas_platyrhynchos
ENSTRUG00000008400	trmt13	97	50.858	ENSACAG00000003498	TRMT13	97	50.858	Anolis_carolinensis
ENSTRUG00000008400	trmt13	99	49.263	ENSANAG00000019525	TRMT13	90	55.102	Aotus_nancymaae
ENSTRUG00000008400	trmt13	97	68.490	ENSACLG00000020018	trmt13	98	68.490	Astatotilapia_calliptera
ENSTRUG00000008400	trmt13	98	51.739	ENSAMXG00000017963	trmt13	98	52.381	Astyanax_mexicanus
ENSTRUG00000008400	trmt13	99	50.211	ENSBTAG00000015781	TRMT13	95	50.215	Bos_taurus
ENSTRUG00000008400	trmt13	99	49.163	ENSCJAG00000000200	TRMT13	89	61.314	Callithrix_jacchus
ENSTRUG00000008400	trmt13	65	48.750	ENSCAFG00000020021	TRMT13	96	49.206	Canis_familiaris
ENSTRUG00000008400	trmt13	58	55.224	ENSCAFG00020011572	TRMT13	91	55.224	Canis_lupus_dingo
ENSTRUG00000008400	trmt13	99	50.000	ENSCHIG00000015395	TRMT13	97	50.000	Capra_hircus
ENSTRUG00000008400	trmt13	99	49.049	ENSTSYG00000010811	TRMT13	92	56.989	Carlito_syrichta
ENSTRUG00000008400	trmt13	73	37.741	ENSCAPG00000009085	TRMT13	99	39.889	Cavia_aperea
ENSTRUG00000008400	trmt13	99	49.367	ENSCPOG00000000694	TRMT13	95	49.573	Cavia_porcellus
ENSTRUG00000008400	trmt13	99	49.474	ENSCCAG00000023772	TRMT13	90	55.102	Cebus_capucinus
ENSTRUG00000008400	trmt13	99	49.684	ENSCATG00000033556	TRMT13	90	55.102	Cercocebus_atys
ENSTRUG00000008400	trmt13	90	48.718	ENSCLAG00000008220	TRMT13	97	49.645	Chinchilla_lanigera
ENSTRUG00000008400	trmt13	99	49.684	ENSCSAG00000001506	TRMT13	95	49.679	Chlorocebus_sabaeus
ENSTRUG00000008400	trmt13	98	50.426	ENSCPBG00000026671	TRMT13	95	50.429	Chrysemys_picta_bellii
ENSTRUG00000008400	trmt13	99	49.684	ENSCANG00000034659	TRMT13	90	55.102	Colobus_angolensis_palliatus
ENSTRUG00000008400	trmt13	98	48.626	ENSCGRG00001021601	Trmt13	96	48.626	Cricetulus_griseus_chok1gshd
ENSTRUG00000008400	trmt13	50	44.048	ENSCGRG00000000093	-	95	44.048	Cricetulus_griseus_crigri
ENSTRUG00000008400	trmt13	99	63.858	ENSCSEG00000000591	trmt13	98	64.206	Cynoglossus_semilaevis
ENSTRUG00000008400	trmt13	99	62.264	ENSCVAG00000017342	trmt13	94	62.368	Cyprinodon_variegatus
ENSTRUG00000008400	trmt13	97	52.381	ENSDARG00000102846	trmt13	96	52.381	Danio_rerio
ENSTRUG00000008400	trmt13	58	56.044	ENSDNOG00000001710	TRMT13	81	56.044	Dasypus_novemcinctus
ENSTRUG00000008400	trmt13	99	48.218	ENSDORG00000015808	Trmt13	95	48.401	Dipodomys_ordii
ENSTRUG00000008400	trmt13	98	33.978	FBgn0037435	CG18048	94	34.490	Drosophila_melanogaster
ENSTRUG00000008400	trmt13	99	45.208	ENSETEG00000005819	TRMT13	97	45.208	Echinops_telfairi
ENSTRUG00000008400	trmt13	96	44.060	ENSEBUG00000014444	trmt13	96	44.060	Eptatretus_burgeri
ENSTRUG00000008400	trmt13	99	49.789	ENSEASG00005015918	TRMT13	95	50.000	Equus_asinus_asinus
ENSTRUG00000008400	trmt13	99	49.578	ENSECAG00000022626	TRMT13	95	49.786	Equus_caballus
ENSTRUG00000008400	trmt13	73	51.667	ENSEEUG00000000294	TRMT13	68	51.923	Erinaceus_europaeus
ENSTRUG00000008400	trmt13	98	53.040	ENSELUG00000003803	trmt13	97	54.430	Esox_lucius
ENSTRUG00000008400	trmt13	99	49.269	ENSFCAG00000030618	TRMT13	98	48.592	Felis_catus
ENSTRUG00000008400	trmt13	97	52.381	ENSFALG00000002424	TRMT13	94	52.735	Ficedula_albicollis
ENSTRUG00000008400	trmt13	99	49.061	ENSFDAG00000006342	TRMT13	95	49.260	Fukomys_damarensis
ENSTRUG00000008400	trmt13	77	66.223	ENSFHEG00000022954	trmt13	99	63.462	Fundulus_heteroclitus
ENSTRUG00000008400	trmt13	96	52.915	ENSGMOG00000013223	trmt13	99	52.928	Gadus_morhua
ENSTRUG00000008400	trmt13	98	50.972	ENSGALG00000005290	TRMT13	95	51.522	Gallus_gallus
ENSTRUG00000008400	trmt13	80	65.768	ENSGAFG00000001577	trmt13	85	65.768	Gambusia_affinis
ENSTRUG00000008400	trmt13	99	69.048	ENSGACG00000013428	trmt13	98	69.956	Gasterosteus_aculeatus
ENSTRUG00000008400	trmt13	98	50.317	ENSGAGG00000023303	TRMT13	95	57.463	Gopherus_agassizii
ENSTRUG00000008400	trmt13	99	49.156	ENSGGOG00000005616	TRMT13	95	49.142	Gorilla_gorilla
ENSTRUG00000008400	trmt13	97	68.192	ENSHBUG00000007754	trmt13	98	68.192	Haplochromis_burtoni
ENSTRUG00000008400	trmt13	99	48.523	ENSHGLG00000002164	TRMT13	95	48.718	Heterocephalus_glaber_female
ENSTRUG00000008400	trmt13	99	48.523	ENSHGLG00100001618	TRMT13	95	48.718	Heterocephalus_glaber_male
ENSTRUG00000008400	trmt13	99	54.077	ENSHCOG00000020553	trmt13	99	54.077	Hippocampus_comes
ENSTRUG00000008400	trmt13	98	52.735	ENSIPUG00000024787	trmt13	98	53.846	Ictalurus_punctatus
ENSTRUG00000008400	trmt13	99	48.745	ENSSTOG00000013483	TRMT13	97	48.745	Ictidomys_tridecemlineatus
ENSTRUG00000008400	trmt13	99	49.686	ENSJJAG00000018012	Trmt13	96	49.680	Jaculus_jaculus
ENSTRUG00000008400	trmt13	65	63.607	ENSKMAG00000007639	trmt13	91	63.907	Kryptolebias_marmoratus
ENSTRUG00000008400	trmt13	99	66.102	ENSLBEG00000020238	trmt13	98	66.882	Labrus_bergylta
ENSTRUG00000008400	trmt13	99	49.894	ENSLACG00000013153	TRMT13	98	49.502	Latimeria_chalumnae
ENSTRUG00000008400	trmt13	98	52.941	ENSLOCG00000000418	trmt13	97	52.941	Lepisosteus_oculatus
ENSTRUG00000008400	trmt13	78	50.266	ENSLAFG00000002383	TRMT13	98	50.272	Loxodonta_africana
ENSTRUG00000008400	trmt13	99	49.474	ENSMFAG00000034681	TRMT13	90	55.102	Macaca_fascicularis
ENSTRUG00000008400	trmt13	99	49.474	ENSMMUG00000004243	TRMT13	90	55.102	Macaca_mulatta
ENSTRUG00000008400	trmt13	99	49.474	ENSMNEG00000036102	TRMT13	90	55.102	Macaca_nemestrina
ENSTRUG00000008400	trmt13	99	49.474	ENSMLEG00000034258	TRMT13	95	49.465	Mandrillus_leucophaeus
ENSTRUG00000008400	trmt13	97	67.325	ENSMAMG00000016597	trmt13	94	67.699	Mastacembelus_armatus
ENSTRUG00000008400	trmt13	97	68.271	ENSMZEG00005020959	trmt13	98	68.271	Maylandia_zebra
ENSTRUG00000008400	trmt13	91	51.732	ENSMGAG00000006970	TRMT13	98	52.459	Meleagris_gallopavo
ENSTRUG00000008400	trmt13	97	49.353	ENSMAUG00000010448	Trmt13	95	49.353	Mesocricetus_auratus
ENSTRUG00000008400	trmt13	99	49.687	ENSMICG00000005283	TRMT13	95	49.682	Microcebus_murinus
ENSTRUG00000008400	trmt13	99	48.847	ENSMOCG00000019914	Trmt13	97	48.847	Microtus_ochrogaster
ENSTRUG00000008400	trmt13	58	69.697	ENSMMOG00000007762	trmt13	90	69.962	Mola_mola
ENSTRUG00000008400	trmt13	99	49.163	ENSMODG00000003646	TRMT13	96	49.364	Monodelphis_domestica
ENSTRUG00000008400	trmt13	99	65.721	ENSMALG00000020965	trmt13	96	66.295	Monopterus_albus
ENSTRUG00000008400	trmt13	99	49.580	MGP_CAROLIEiJ_G0025568	Trmt13	96	51.685	Mus_caroli
ENSTRUG00000008400	trmt13	99	49.790	ENSMUSG00000033439	Trmt13	96	52.809	Mus_musculus
ENSTRUG00000008400	trmt13	99	49.370	MGP_PahariEiJ_G0027014	Trmt13	93	53.488	Mus_pahari
ENSTRUG00000008400	trmt13	97	50.426	MGP_SPRETEiJ_G0026518	Trmt13	96	52.809	Mus_spretus
ENSTRUG00000008400	trmt13	79	49.206	ENSMPUG00000002078	-	95	49.189	Mustela_putorius_furo
ENSTRUG00000008400	trmt13	99	50.529	ENSMLUG00000002124	TRMT13	97	50.529	Myotis_lucifugus
ENSTRUG00000008400	trmt13	97	63.537	ENSNBRG00000006783	trmt13	96	63.537	Neolamprologus_brichardi
ENSTRUG00000008400	trmt13	99	49.367	ENSNLEG00000035917	TRMT13	95	49.356	Nomascus_leucogenys
ENSTRUG00000008400	trmt13	52	47.083	ENSMEUG00000013346	-	94	47.083	Notamacropus_eugenii
ENSTRUG00000008400	trmt13	58	55.970	ENSOPRG00000012048	TRMT13	55	55.970	Ochotona_princeps
ENSTRUG00000008400	trmt13	97	68.845	ENSONIG00000004574	trmt13	98	68.845	Oreochromis_niloticus
ENSTRUG00000008400	trmt13	91	49.887	ENSOANG00000012057	TRMT13	97	50.233	Ornithorhynchus_anatinus
ENSTRUG00000008400	trmt13	99	49.476	ENSOCUG00000023095	TRMT13	97	49.476	Oryctolagus_cuniculus
ENSTRUG00000008400	trmt13	99	59.574	ENSORLG00000003320	trmt13	98	59.483	Oryzias_latipes
ENSTRUG00000008400	trmt13	99	59.871	ENSORLG00020005972	trmt13	98	60.173	Oryzias_latipes_hni
ENSTRUG00000008400	trmt13	99	64.957	ENSORLG00015002270	trmt13	98	64.935	Oryzias_latipes_hsok
ENSTRUG00000008400	trmt13	99	64.946	ENSOMEG00000006724	trmt13	94	65.882	Oryzias_melastigma
ENSTRUG00000008400	trmt13	98	49.465	ENSOGAG00000005618	TRMT13	93	49.465	Otolemur_garnettii
ENSTRUG00000008400	trmt13	99	50.000	ENSOARG00000017983	TRMT13	97	50.000	Ovis_aries
ENSTRUG00000008400	trmt13	99	50.000	ENSPPAG00000043736	TRMT13	95	50.000	Pan_paniscus
ENSTRUG00000008400	trmt13	99	49.269	ENSPPRG00000003424	TRMT13	98	48.592	Panthera_pardus
ENSTRUG00000008400	trmt13	99	49.269	ENSPTIG00000018598	TRMT13	98	48.592	Panthera_tigris_altaica
ENSTRUG00000008400	trmt13	99	49.790	ENSPTRG00000001001	TRMT13	95	49.786	Pan_troglodytes
ENSTRUG00000008400	trmt13	99	49.684	ENSPANG00000007598	TRMT13	90	55.102	Papio_anubis
ENSTRUG00000008400	trmt13	97	54.222	ENSPKIG00000001514	trmt13	96	54.505	Paramormyrops_kingsleyae
ENSTRUG00000008400	trmt13	88	49.409	ENSPSIG00000012703	TRMT13	99	49.409	Pelodiscus_sinensis
ENSTRUG00000008400	trmt13	99	55.508	ENSPMGG00000013298	trmt13	93	56.223	Periophthalmus_magnuspinnatus
ENSTRUG00000008400	trmt13	98	49.471	ENSPEMG00000000275	Trmt13	95	49.471	Peromyscus_maniculatus_bairdii
ENSTRUG00000008400	trmt13	97	45.435	ENSPMAG00000000823	trmt13	97	45.435	Petromyzon_marinus
ENSTRUG00000008400	trmt13	99	48.218	ENSPCIG00000007699	TRMT13	96	48.832	Phascolarctos_cinereus
ENSTRUG00000008400	trmt13	98	62.667	ENSPFOG00000008675	trmt13	93	63.554	Poecilia_formosa
ENSTRUG00000008400	trmt13	98	62.996	ENSPLAG00000009709	trmt13	99	63.111	Poecilia_latipinna
ENSTRUG00000008400	trmt13	98	63.216	ENSPMEG00000022954	trmt13	99	63.111	Poecilia_mexicana
ENSTRUG00000008400	trmt13	80	67.385	ENSPREG00000005645	trmt13	95	62.414	Poecilia_reticulata
ENSTRUG00000008400	trmt13	99	49.156	ENSPPYG00000001120	TRMT13	95	49.142	Pongo_abelii
ENSTRUG00000008400	trmt13	99	50.316	ENSPCAG00000002340	TRMT13	95	50.321	Procavia_capensis
ENSTRUG00000008400	trmt13	99	49.061	ENSPCOG00000017984	TRMT13	95	49.045	Propithecus_coquereli
ENSTRUG00000008400	trmt13	99	49.894	ENSPVAG00000017430	TRMT13	95	50.107	Pteropus_vampyrus
ENSTRUG00000008400	trmt13	97	65.577	ENSPNYG00000013690	trmt13	98	65.577	Pundamilia_nyererei
ENSTRUG00000008400	trmt13	98	51.293	ENSPNAG00000022130	trmt13	98	51.293	Pygocentrus_nattereri
ENSTRUG00000008400	trmt13	97	50.000	ENSRNOG00000015140	Trmt13	92	50.000	Rattus_norvegicus
ENSTRUG00000008400	trmt13	99	49.684	ENSRBIG00000037686	TRMT13	90	55.102	Rhinopithecus_bieti
ENSTRUG00000008400	trmt13	99	49.684	ENSRROG00000044057	TRMT13	90	55.102	Rhinopithecus_roxellana
ENSTRUG00000008400	trmt13	99	49.269	ENSSBOG00000026541	TRMT13	90	55.102	Saimiri_boliviensis_boliviensis
ENSTRUG00000008400	trmt13	91	49.654	ENSSHAG00000005213	TRMT13	94	49.885	Sarcophilus_harrisii
ENSTRUG00000008400	trmt13	99	52.034	ENSSFOG00015017560	trmt13	97	53.796	Scleropages_formosus
ENSTRUG00000008400	trmt13	98	65.096	ENSSMAG00000014592	trmt13	96	65.236	Scophthalmus_maximus
ENSTRUG00000008400	trmt13	98	65.684	ENSSDUG00000015508	trmt13	95	65.684	Seriola_dumerili
ENSTRUG00000008400	trmt13	99	64.990	ENSSLDG00000019060	trmt13	96	65.190	Seriola_lalandi_dorsalis
ENSTRUG00000008400	trmt13	99	44.928	ENSSARG00000010344	TRMT13	97	44.421	Sorex_araneus
ENSTRUG00000008400	trmt13	98	51.168	ENSSPUG00000016339	TRMT13	97	51.404	Sphenodon_punctatus
ENSTRUG00000008400	trmt13	96	68.363	ENSSPAG00000011922	trmt13	96	68.363	Stegastes_partitus
ENSTRUG00000008400	trmt13	99	50.734	ENSSSCG00000006869	TRMT13	95	50.746	Sus_scrofa
ENSTRUG00000008400	trmt13	97	51.957	ENSTGUG00000005253	TRMT13	97	51.957	Taeniopygia_guttata
ENSTRUG00000008400	trmt13	86	39.952	ENSTBEG00000008911	TRMT13	97	39.753	Tupaia_belangeri
ENSTRUG00000008400	trmt13	99	48.326	ENSUAMG00000017251	TRMT13	95	48.298	Ursus_americanus
ENSTRUG00000008400	trmt13	99	50.313	ENSUMAG00000007901	TRMT13	97	50.580	Ursus_maritimus
ENSTRUG00000008400	trmt13	91	39.631	ENSVPAG00000001034	TRMT13	99	39.631	Vicugna_pacos
ENSTRUG00000008400	trmt13	99	49.580	ENSVVUG00000021996	TRMT13	95	49.893	Vulpes_vulpes
ENSTRUG00000008400	trmt13	98	48.802	ENSXETG00000013204	trmt13	96	49.015	Xenopus_tropicalis
ENSTRUG00000008400	trmt13	98	63.274	ENSXMAG00000010765	trmt13	98	63.393	Xiphophorus_maculatus