EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000008409 (Gene tree)
Gene ID: 101080187
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 32938 bases
Position: chr4:4569156-4602093
Accession: 101080187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000021059	PPR	PF01535.20	2.7e-36	1	5
ENSTRUP00000021059	PPR	PF01535.20	2.7e-36	2	5
ENSTRUP00000021059	PPR	PF01535.20	2.7e-36	3	5
ENSTRUP00000021059	PPR	PF01535.20	2.7e-36	4	5
ENSTRUP00000021059	PPR	PF01535.20	2.7e-36	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000021146	-	4043	XM_011603132	ENSTRUP00000021059	1338 (aa)	XP_011601434	H2T8R9

Gene Model

Click here to download ENSTRUG00000008409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000008409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000008409	lrpprc	96	70.933	ENSAPOG00000016610	lrpprc	99	70.933	Acanthochromis_polyacanthus
ENSTRUG00000008409	lrpprc	93	52.590	ENSAMEG00000005852	LRPPRC	91	52.590	Ailuropoda_melanoleuca
ENSTRUG00000008409	lrpprc	97	69.130	ENSACIG00000009604	lrpprc	92	69.130	Amphilophus_citrinellus
ENSTRUG00000008409	lrpprc	96	71.000	ENSAOCG00000005886	lrpprc	99	71.077	Amphiprion_ocellaris
ENSTRUG00000008409	lrpprc	97	66.718	ENSAPEG00000002937	lrpprc	99	66.718	Amphiprion_percula
ENSTRUG00000008409	lrpprc	96	59.612	ENSATEG00000010555	lrpprc	95	71.915	Anabas_testudineus
ENSTRUG00000008409	lrpprc	90	56.522	ENSACAG00000029278	LRPPRC	99	54.310	Anolis_carolinensis
ENSTRUG00000008409	lrpprc	91	53.971	ENSANAG00000027440	LRPPRC	88	60.554	Aotus_nancymaae
ENSTRUG00000008409	lrpprc	92	68.528	ENSACLG00000023712	lrpprc	92	76.582	Astatotilapia_calliptera
ENSTRUG00000008409	lrpprc	91	53.360	ENSCJAG00000000794	LRPPRC	96	53.522	Callithrix_jacchus
ENSTRUG00000008409	lrpprc	94	52.201	ENSCHIG00000020173	LRPPRC	99	51.843	Capra_hircus
ENSTRUG00000008409	lrpprc	88	41.023	ENSCAPG00000013631	LRPPRC	89	41.023	Cavia_aperea
ENSTRUG00000008409	lrpprc	81	50.317	ENSCPOG00000000204	LRPPRC	89	50.318	Cavia_porcellus
ENSTRUG00000008409	lrpprc	96	52.151	ENSCCAG00000031900	LRPPRC	97	56.134	Cebus_capucinus
ENSTRUG00000008409	lrpprc	97	51.761	ENSCATG00000014187	LRPPRC	87	59.957	Cercocebus_atys
ENSTRUG00000008409	lrpprc	96	49.579	ENSCLAG00000005203	LRPPRC	99	49.579	Chinchilla_lanigera
ENSTRUG00000008409	lrpprc	91	53.659	ENSCSAG00000013233	LRPPRC	87	53.771	Chlorocebus_sabaeus
ENSTRUG00000008409	lrpprc	80	51.268	ENSCHOG00000003631	LRPPRC	75	51.268	Choloepus_hoffmanni
ENSTRUG00000008409	lrpprc	91	51.380	ENSCANG00000034961	LRPPRC	99	69.565	Colobus_angolensis_palliatus
ENSTRUG00000008409	lrpprc	96	51.347	ENSCGRG00001016261	Lrpprc	99	51.268	Cricetulus_griseus_chok1gshd
ENSTRUG00000008409	lrpprc	96	51.347	ENSCGRG00000004072	Lrpprc	99	51.268	Cricetulus_griseus_crigri
ENSTRUG00000008409	lrpprc	97	51.405	ENSCSEG00000003850	lrpprc	96	58.008	Cynoglossus_semilaevis
ENSTRUG00000008409	lrpprc	96	70.988	ENSCVAG00000012967	lrpprc	99	70.988	Cyprinodon_variegatus
ENSTRUG00000008409	lrpprc	97	56.548	ENSDARG00000043970	lrpprc	99	56.548	Danio_rerio
ENSTRUG00000008409	lrpprc	82	41.817	ENSDNOG00000032336	-	95	41.817	Dasypus_novemcinctus
ENSTRUG00000008409	lrpprc	96	51.917	ENSDNOG00000012594	-	91	51.917	Dasypus_novemcinctus
ENSTRUG00000008409	lrpprc	93	52.188	ENSDORG00000012233	Lrpprc	91	51.457	Dipodomys_ordii
ENSTRUG00000008409	lrpprc	96	51.070	ENSETEG00000006657	LRPPRC	99	51.337	Echinops_telfairi
ENSTRUG00000008409	lrpprc	80	52.340	ENSEEUG00000012340	LRPPRC	80	52.340	Erinaceus_europaeus
ENSTRUG00000008409	lrpprc	92	59.759	ENSELUG00000012803	lrpprc	91	59.759	Esox_lucius
ENSTRUG00000008409	lrpprc	96	52.615	ENSFCAG00000013468	LRPPRC	99	52.797	Felis_catus
ENSTRUG00000008409	lrpprc	91	49.878	ENSFALG00000012738	LRPPRC	90	49.878	Ficedula_albicollis
ENSTRUG00000008409	lrpprc	96	48.925	ENSFDAG00000015328	LRPPRC	99	48.925	Fukomys_damarensis
ENSTRUG00000008409	lrpprc	96	69.367	ENSFHEG00000019604	lrpprc	99	69.367	Fundulus_heteroclitus
ENSTRUG00000008409	lrpprc	96	61.223	ENSGMOG00000008337	lrpprc	99	61.223	Gadus_morhua
ENSTRUG00000008409	lrpprc	96	68.417	ENSGAFG00000001455	lrpprc	99	68.417	Gambusia_affinis
ENSTRUG00000008409	lrpprc	96	67.281	ENSGACG00000010679	lrpprc	99	70.392	Gasterosteus_aculeatus
ENSTRUG00000008409	lrpprc	97	73.620	ENSHBUG00000000393	lrpprc	98	73.620	Haplochromis_burtoni
ENSTRUG00000008409	lrpprc	96	49.269	ENSHGLG00000006123	LRPPRC	92	49.269	Heterocephalus_glaber_female
ENSTRUG00000008409	lrpprc	53	47.434	ENSHGLG00100005960	-	85	47.434	Heterocephalus_glaber_male
ENSTRUG00000008409	lrpprc	96	68.667	ENSHCOG00000002107	lrpprc	93	68.779	Hippocampus_comes
ENSTRUG00000008409	lrpprc	96	62.415	ENSIPUG00000009406	lrpprc	99	62.415	Ictalurus_punctatus
ENSTRUG00000008409	lrpprc	91	52.760	ENSSTOG00000011185	LRPPRC	91	51.613	Ictidomys_tridecemlineatus
ENSTRUG00000008409	lrpprc	91	51.707	ENSJJAG00000020475	Lrpprc	91	50.654	Jaculus_jaculus
ENSTRUG00000008409	lrpprc	95	62.745	ENSKMAG00000003287	lrpprc	84	62.745	Kryptolebias_marmoratus
ENSTRUG00000008409	lrpprc	96	63.037	ENSLBEG00000023225	lrpprc	96	73.256	Labrus_bergylta
ENSTRUG00000008409	lrpprc	96	58.062	ENSLACG00000014030	LRPPRC	99	58.062	Latimeria_chalumnae
ENSTRUG00000008409	lrpprc	96	61.271	ENSLOCG00000016390	lrpprc	97	61.271	Lepisosteus_oculatus
ENSTRUG00000008409	lrpprc	96	48.545	ENSLAFG00000008614	LRPPRC	91	48.624	Loxodonta_africana
ENSTRUG00000008409	lrpprc	91	53.003	ENSMFAG00000041560	LRPPRC	83	68.421	Macaca_fascicularis
ENSTRUG00000008409	lrpprc	91	53.084	ENSMMUG00000019841	LRPPRC	88	59.322	Macaca_mulatta
ENSTRUG00000008409	lrpprc	96	51.727	ENSMNEG00000031613	LRPPRC	87	59.957	Macaca_nemestrina
ENSTRUG00000008409	lrpprc	97	63.740	ENSMAMG00000021835	lrpprc	93	63.575	Mastacembelus_armatus
ENSTRUG00000008409	lrpprc	97	73.390	ENSMZEG00005027379	lrpprc	99	73.390	Maylandia_zebra
ENSTRUG00000008409	lrpprc	96	51.385	ENSMAUG00000012118	Lrpprc	99	52.156	Mesocricetus_auratus
ENSTRUG00000008409	lrpprc	96	51.690	ENSMICG00000010486	LRPPRC	98	55.556	Microcebus_murinus
ENSTRUG00000008409	lrpprc	96	51.420	ENSMOCG00000006048	Lrpprc	99	51.420	Microtus_ochrogaster
ENSTRUG00000008409	lrpprc	96	72.244	ENSMMOG00000007830	lrpprc	94	78.405	Mola_mola
ENSTRUG00000008409	lrpprc	91	53.224	ENSMODG00000000648	LRPPRC	98	53.224	Monodelphis_domestica
ENSTRUG00000008409	lrpprc	97	69.048	ENSMALG00000001271	lrpprc	91	69.048	Monopterus_albus
ENSTRUG00000008409	lrpprc	96	51.724	ENSMPUG00000011800	LRPPRC	99	53.219	Mustela_putorius_furo
ENSTRUG00000008409	lrpprc	96	51.923	ENSMLUG00000010575	LRPPRC	99	52.114	Myotis_lucifugus
ENSTRUG00000008409	lrpprc	96	50.615	ENSNGAG00000013069	Lrpprc	99	50.615	Nannospalax_galili
ENSTRUG00000008409	lrpprc	90	67.137	ENSNBRG00000013202	lrpprc	92	76.160	Neolamprologus_brichardi
ENSTRUG00000008409	lrpprc	96	52.111	ENSNLEG00000016782	LRPPRC	98	55.823	Nomascus_leucogenys
ENSTRUG00000008409	lrpprc	85	47.108	ENSOPRG00000016774	LRPPRC	92	47.108	Ochotona_princeps
ENSTRUG00000008409	lrpprc	91	52.195	ENSODEG00000011211	LRPPRC	91	50.803	Octodon_degus
ENSTRUG00000008409	lrpprc	97	73.466	ENSONIG00000000917	lrpprc	100	72.355	Oreochromis_niloticus
ENSTRUG00000008409	lrpprc	57	48.843	ENSOANG00000014670	-	100	48.843	Ornithorhynchus_anatinus
ENSTRUG00000008409	lrpprc	97	52.744	ENSOCUG00000015046	LRPPRC	87	52.816	Oryctolagus_cuniculus
ENSTRUG00000008409	lrpprc	96	66.148	ENSORLG00000004605	lrpprc	90	64.821	Oryzias_latipes
ENSTRUG00000008409	lrpprc	86	69.689	ENSORLG00020012536	lrpprc	90	69.580	Oryzias_latipes_hni
ENSTRUG00000008409	lrpprc	96	66.328	ENSORLG00015018270	lrpprc	93	72.656	Oryzias_latipes_hsok
ENSTRUG00000008409	lrpprc	92	52.510	ENSOGAG00000012798	LRPPRC	91	51.997	Otolemur_garnettii
ENSTRUG00000008409	lrpprc	90	53.536	ENSOARG00000006522	LRPPRC	99	51.920	Ovis_aries
ENSTRUG00000008409	lrpprc	96	50.688	ENSPPAG00000040876	LRPPRC	98	54.596	Pan_paniscus
ENSTRUG00000008409	lrpprc	96	52.114	ENSPPRG00000006578	LRPPRC	99	52.490	Panthera_pardus
ENSTRUG00000008409	lrpprc	91	53.777	ENSPTIG00000000933	LRPPRC	96	53.777	Panthera_tigris_altaica
ENSTRUG00000008409	lrpprc	96	51.459	ENSPTRG00000011880	LRPPRC	98	54.880	Pan_troglodytes
ENSTRUG00000008409	lrpprc	97	51.225	ENSPANG00000020731	LRPPRC	87	59.529	Papio_anubis
ENSTRUG00000008409	lrpprc	92	50.767	ENSPKIG00000022232	lrpprc	97	58.140	Paramormyrops_kingsleyae
ENSTRUG00000008409	lrpprc	55	55.121	ENSPSIG00000006830	-	99	55.121	Pelodiscus_sinensis
ENSTRUG00000008409	lrpprc	61	58.680	ENSPMGG00000016597	lrpprc	82	58.680	Periophthalmus_magnuspinnatus
ENSTRUG00000008409	lrpprc	89	46.722	ENSPMAG00000002147	lrpprc	99	46.722	Petromyzon_marinus
ENSTRUG00000008409	lrpprc	96	67.260	ENSPFOG00000011227	lrpprc	100	67.260	Poecilia_formosa
ENSTRUG00000008409	lrpprc	96	67.105	ENSPLAG00000004018	lrpprc	100	67.105	Poecilia_latipinna
ENSTRUG00000008409	lrpprc	96	67.105	ENSPMEG00000016425	lrpprc	100	67.105	Poecilia_mexicana
ENSTRUG00000008409	lrpprc	96	67.260	ENSPREG00000003662	lrpprc	100	67.260	Poecilia_reticulata
ENSTRUG00000008409	lrpprc	51	49.419	ENSPPYG00000029532	-	84	49.419	Pongo_abelii
ENSTRUG00000008409	lrpprc	80	52.333	ENSPCAG00000001430	LRPPRC	77	52.333	Procavia_capensis
ENSTRUG00000008409	lrpprc	96	50.231	ENSPVAG00000002007	LRPPRC	91	50.231	Pteropus_vampyrus
ENSTRUG00000008409	lrpprc	96	65.943	ENSPNYG00000000756	lrpprc	89	75.957	Pundamilia_nyererei
ENSTRUG00000008409	lrpprc	99	62.198	ENSPNAG00000002895	lrpprc	99	62.198	Pygocentrus_nattereri
ENSTRUG00000008409	lrpprc	91	51.993	ENSRNOG00000005877	Lrpprc	99	50.845	Rattus_norvegicus
ENSTRUG00000008409	lrpprc	96	51.606	ENSRBIG00000031552	LRPPRC	91	51.716	Rhinopithecus_bieti
ENSTRUG00000008409	lrpprc	91	53.690	ENSSBOG00000011807	LRPPRC	88	59.915	Saimiri_boliviensis_boliviensis
ENSTRUG00000008409	lrpprc	91	51.761	ENSSHAG00000018725	LRPPRC	99	51.761	Sarcophilus_harrisii
ENSTRUG00000008409	lrpprc	97	55.455	ENSSFOG00015001042	lrpprc	91	55.530	Scleropages_formosus
ENSTRUG00000008409	lrpprc	97	71.188	ENSSDUG00000019062	lrpprc	99	71.188	Seriola_dumerili
ENSTRUG00000008409	lrpprc	96	54.829	ENSSLDG00000023028	lrpprc	91	55.042	Seriola_lalandi_dorsalis
ENSTRUG00000008409	lrpprc	87	50.384	ENSSARG00000000426	LRPPRC	95	50.384	Sorex_araneus
ENSTRUG00000008409	lrpprc	96	63.595	ENSSPAG00000000162	lrpprc	91	63.671	Stegastes_partitus
ENSTRUG00000008409	lrpprc	96	51.951	ENSSSCG00000008452	LRPPRC	92	51.951	Sus_scrofa
ENSTRUG00000008409	lrpprc	89	50.414	ENSTGUG00000003759	LRPPRC	99	50.414	Taeniopygia_guttata
ENSTRUG00000008409	lrpprc	96	82.663	ENSTNIG00000007470	lrpprc	99	84.779	Tetraodon_nigroviridis
ENSTRUG00000008409	lrpprc	96	50.154	ENSTTRG00000006403	LRPPRC	91	50.154	Tursiops_truncatus
ENSTRUG00000008409	lrpprc	91	49.715	ENSVPAG00000008993	LRPPRC	90	49.715	Vicugna_pacos
ENSTRUG00000008409	lrpprc	96	56.163	ENSXETG00000009296	lrpprc	99	56.240	Xenopus_tropicalis
ENSTRUG00000008409	lrpprc	96	62.891	ENSXCOG00000013343	lrpprc	100	64.684	Xiphophorus_couchianus
ENSTRUG00000008409	lrpprc	96	67.574	ENSXMAG00000018108	lrpprc	100	67.695	Xiphophorus_maculatus