EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000008410 (Gene tree)
Gene ID: 101062645
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 5662 bases
Position: chr20:344730-350391
Accession: 101062645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000021061	ResIII	PF04851.15	4.6e-08	1	1
ENSTRUP00000021061	DEAD	PF00270.29	7.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000021148	-	2130	XM_011614427	ENSTRUP00000021061	709 (aa)	XP_011612729	H2T8S1

Gene Model

Click here to download ENSTRUG00000008410's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000008410's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000008410	rad54l	80	33.891	ENSTRUG00000000350	hells	58	36.697
ENSTRUG00000008410	rad54l	91	43.598	ENSTRUG00000010015	rad54b	68	43.598

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000008410	rad54l	99	76.542	ENSG00000085999	RAD54L	100	82.667	Homo_sapiens
ENSTRUG00000008410	rad54l	99	82.297	ENSAPOG00000011643	rad54l	100	82.297	Acanthochromis_polyacanthus
ENSTRUG00000008410	rad54l	99	74.565	ENSAMEG00000013902	RAD54L	99	74.565	Ailuropoda_melanoleuca
ENSTRUG00000008410	rad54l	100	81.916	ENSACIG00000001939	rad54l	99	81.916	Amphilophus_citrinellus
ENSTRUG00000008410	rad54l	99	85.792	ENSAOCG00000017576	rad54l	99	85.792	Amphiprion_ocellaris
ENSTRUG00000008410	rad54l	95	90.370	ENSAPEG00000020658	rad54l	93	90.370	Amphiprion_percula
ENSTRUG00000008410	rad54l	95	90.385	ENSATEG00000006767	rad54l	96	90.385	Anabas_testudineus
ENSTRUG00000008410	rad54l	96	82.006	ENSAPLG00000006389	RAD54L	96	82.006	Anas_platyrhynchos
ENSTRUG00000008410	rad54l	99	77.524	ENSACAG00000002312	RAD54L	99	77.524	Anolis_carolinensis
ENSTRUG00000008410	rad54l	99	76.305	ENSANAG00000035439	RAD54L	99	76.273	Aotus_nancymaae
ENSTRUG00000008410	rad54l	100	82.869	ENSACLG00000018711	rad54l	99	83.148	Astatotilapia_calliptera
ENSTRUG00000008410	rad54l	99	82.615	ENSAMXG00000012777	rad54l	99	82.615	Astyanax_mexicanus
ENSTRUG00000008410	rad54l	99	75.502	ENSBTAG00000019901	RAD54L	99	75.502	Bos_taurus
ENSTRUG00000008410	rad54l	94	58.754	WBGene00004298	rad-54	82	57.738	Caenorhabditis_elegans
ENSTRUG00000008410	rad54l	96	77.051	ENSCJAG00000021080	RAD54L	91	77.051	Callithrix_jacchus
ENSTRUG00000008410	rad54l	99	74.933	ENSCAFG00000004272	RAD54L	99	74.933	Canis_familiaris
ENSTRUG00000008410	rad54l	99	74.967	ENSCAFG00020015066	RAD54L	99	74.967	Canis_lupus_dingo
ENSTRUG00000008410	rad54l	99	75.401	ENSCHIG00000020118	RAD54L	99	75.401	Capra_hircus
ENSTRUG00000008410	rad54l	99	75.234	ENSTSYG00000002032	RAD54L	99	75.234	Carlito_syrichta
ENSTRUG00000008410	rad54l	99	76.005	ENSCPOG00000006768	RAD54L	99	76.005	Cavia_porcellus
ENSTRUG00000008410	rad54l	99	76.810	ENSCCAG00000025783	RAD54L	99	76.810	Cebus_capucinus
ENSTRUG00000008410	rad54l	99	76.542	ENSCATG00000030589	RAD54L	99	76.542	Cercocebus_atys
ENSTRUG00000008410	rad54l	99	76.139	ENSCLAG00000004645	RAD54L	99	76.139	Chinchilla_lanigera
ENSTRUG00000008410	rad54l	99	76.408	ENSCSAG00000001229	RAD54L	99	76.408	Chlorocebus_sabaeus
ENSTRUG00000008410	rad54l	99	76.447	ENSCPBG00000005675	RAD54L	99	76.447	Chrysemys_picta_bellii
ENSTRUG00000008410	rad54l	95	66.521	ENSCING00000024456	-	90	66.521	Ciona_intestinalis
ENSTRUG00000008410	rad54l	95	65.685	ENSCSAVG00000010859	-	89	65.685	Ciona_savignyi
ENSTRUG00000008410	rad54l	99	76.408	ENSCANG00000034891	RAD54L	99	76.408	Colobus_angolensis_palliatus
ENSTRUG00000008410	rad54l	99	75.370	ENSCGRG00001014807	Rad54l	99	75.370	Cricetulus_griseus_chok1gshd
ENSTRUG00000008410	rad54l	99	75.370	ENSCGRG00000016038	Rad54l	99	75.370	Cricetulus_griseus_crigri
ENSTRUG00000008410	rad54l	99	86.269	ENSCSEG00000001983	rad54l	99	86.269	Cynoglossus_semilaevis
ENSTRUG00000008410	rad54l	80	88.259	ENSCVAG00000019561	rad54l	99	87.200	Cyprinodon_variegatus
ENSTRUG00000008410	rad54l	99	81.572	ENSDARG00000018623	rad54l	99	81.572	Danio_rerio
ENSTRUG00000008410	rad54l	99	74.665	ENSDNOG00000003395	RAD54L	99	74.665	Dasypus_novemcinctus
ENSTRUG00000008410	rad54l	99	70.706	ENSDORG00000002632	Rad54l	99	70.588	Dipodomys_ordii
ENSTRUG00000008410	rad54l	95	57.396	FBgn0002989	okr	86	57.396	Drosophila_melanogaster
ENSTRUG00000008410	rad54l	76	73.362	ENSETEG00000000550	RAD54L	78	73.362	Echinops_telfairi
ENSTRUG00000008410	rad54l	96	79.736	ENSEASG00005004511	RAD54L	99	76.305	Equus_asinus_asinus
ENSTRUG00000008410	rad54l	99	78.873	ENSECAG00000008760	RAD54L	99	78.873	Equus_caballus
ENSTRUG00000008410	rad54l	99	74.665	ENSEEUG00000008113	RAD54L	99	74.665	Erinaceus_europaeus
ENSTRUG00000008410	rad54l	99	82.527	ENSELUG00000002295	rad54l	99	82.527	Esox_lucius
ENSTRUG00000008410	rad54l	99	74.129	ENSFCAG00000003444	RAD54L	99	74.129	Felis_catus
ENSTRUG00000008410	rad54l	99	76.344	ENSFALG00000009480	RAD54L	99	76.747	Ficedula_albicollis
ENSTRUG00000008410	rad54l	99	75.201	ENSFDAG00000007806	RAD54L	99	75.201	Fukomys_damarensis
ENSTRUG00000008410	rad54l	61	84.382	ENSFHEG00000009824	rad54l	74	84.382	Fundulus_heteroclitus
ENSTRUG00000008410	rad54l	99	80.978	ENSGMOG00000014568	rad54l	100	80.978	Gadus_morhua
ENSTRUG00000008410	rad54l	99	78.167	ENSGALG00000010356	RAD54L	92	77.898	Gallus_gallus
ENSTRUG00000008410	rad54l	91	80.684	ENSGAFG00000011110	rad54l	99	80.684	Gambusia_affinis
ENSTRUG00000008410	rad54l	99	84.345	ENSGACG00000003111	rad54l	97	84.345	Gasterosteus_aculeatus
ENSTRUG00000008410	rad54l	99	75.941	ENSGAGG00000014089	RAD54L	96	75.941	Gopherus_agassizii
ENSTRUG00000008410	rad54l	99	76.408	ENSGGOG00000010602	RAD54L	99	76.408	Gorilla_gorilla
ENSTRUG00000008410	rad54l	100	83.287	ENSHBUG00000007793	rad54l	99	83.287	Haplochromis_burtoni
ENSTRUG00000008410	rad54l	99	75.737	ENSHGLG00000000753	RAD54L	99	75.737	Heterocephalus_glaber_female
ENSTRUG00000008410	rad54l	99	75.737	ENSHGLG00100016987	RAD54L	99	75.737	Heterocephalus_glaber_male
ENSTRUG00000008410	rad54l	96	85.420	ENSIPUG00000015999	rad54l	97	85.420	Ictalurus_punctatus
ENSTRUG00000008410	rad54l	99	75.067	ENSSTOG00000029125	RAD54L	99	75.067	Ictidomys_tridecemlineatus
ENSTRUG00000008410	rad54l	99	64.490	ENSJJAG00000000235	-	99	64.490	Jaculus_jaculus
ENSTRUG00000008410	rad54l	100	81.461	ENSKMAG00000009944	rad54l	99	82.138	Kryptolebias_marmoratus
ENSTRUG00000008410	rad54l	95	90.356	ENSLBEG00000014617	rad54l	97	90.356	Labrus_bergylta
ENSTRUG00000008410	rad54l	99	81.023	ENSLOCG00000004144	rad54l	99	82.318	Lepisosteus_oculatus
ENSTRUG00000008410	rad54l	99	75.368	ENSLAFG00000007583	RAD54L	100	75.636	Loxodonta_africana
ENSTRUG00000008410	rad54l	99	76.542	ENSMFAG00000031241	RAD54L	99	76.542	Macaca_fascicularis
ENSTRUG00000008410	rad54l	99	76.542	ENSMMUG00000011568	RAD54L	99	76.542	Macaca_mulatta
ENSTRUG00000008410	rad54l	99	76.676	ENSMNEG00000038562	RAD54L	99	76.676	Macaca_nemestrina
ENSTRUG00000008410	rad54l	99	76.542	ENSMLEG00000038145	RAD54L	99	76.542	Mandrillus_leucophaeus
ENSTRUG00000008410	rad54l	96	87.830	ENSMAMG00000022180	rad54l	99	88.410	Mastacembelus_armatus
ENSTRUG00000008410	rad54l	100	82.869	ENSMZEG00005018081	rad54l	99	83.148	Maylandia_zebra
ENSTRUG00000008410	rad54l	99	77.927	ENSMGAG00000010634	RAD54L	99	77.927	Meleagris_gallopavo
ENSTRUG00000008410	rad54l	99	75.774	ENSMAUG00000020076	Rad54l	99	75.774	Mesocricetus_auratus
ENSTRUG00000008410	rad54l	99	76.139	ENSMICG00000003266	RAD54L	99	76.139	Microcebus_murinus
ENSTRUG00000008410	rad54l	99	75.908	ENSMOCG00000001778	Rad54l	99	75.908	Microtus_ochrogaster
ENSTRUG00000008410	rad54l	100	80.780	ENSMALG00000021148	rad54l	100	80.780	Monopterus_albus
ENSTRUG00000008410	rad54l	99	71.429	MGP_CAROLIEiJ_G0026325	Rad54l	99	71.429	Mus_caroli
ENSTRUG00000008410	rad54l	99	75.067	ENSMUSG00000028702	Rad54l	99	75.067	Mus_musculus
ENSTRUG00000008410	rad54l	99	75.168	MGP_PahariEiJ_G0028657	Rad54l	99	75.168	Mus_pahari
ENSTRUG00000008410	rad54l	99	75.067	MGP_SPRETEiJ_G0027297	Rad54l	99	75.067	Mus_spretus
ENSTRUG00000008410	rad54l	99	74.866	ENSMPUG00000012883	RAD54L	99	74.866	Mustela_putorius_furo
ENSTRUG00000008410	rad54l	99	75.770	ENSMLUG00000003763	RAD54L	99	75.770	Myotis_lucifugus
ENSTRUG00000008410	rad54l	99	74.933	ENSNGAG00000024213	Rad54l	99	74.933	Nannospalax_galili
ENSTRUG00000008410	rad54l	99	76.408	ENSNLEG00000016548	RAD54L	99	76.408	Nomascus_leucogenys
ENSTRUG00000008410	rad54l	95	77.630	ENSMEUG00000006793	RAD54L	100	77.630	Notamacropus_eugenii
ENSTRUG00000008410	rad54l	90	79.094	ENSOPRG00000016016	RAD54L	90	79.094	Ochotona_princeps
ENSTRUG00000008410	rad54l	99	76.139	ENSODEG00000008519	RAD54L	99	76.005	Octodon_degus
ENSTRUG00000008410	rad54l	100	80.214	ENSONIG00000007659	rad54l	100	80.214	Oreochromis_niloticus
ENSTRUG00000008410	rad54l	99	76.005	ENSOCUG00000005229	RAD54L	99	76.005	Oryctolagus_cuniculus
ENSTRUG00000008410	rad54l	99	82.900	ENSORLG00000002958	rad54l	99	82.674	Oryzias_latipes
ENSTRUG00000008410	rad54l	95	87.537	ENSORLG00020006554	rad54l	99	87.537	Oryzias_latipes_hni
ENSTRUG00000008410	rad54l	99	82.923	ENSORLG00015002907	rad54l	99	82.698	Oryzias_latipes_hsok
ENSTRUG00000008410	rad54l	99	82.514	ENSOMEG00000007770	rad54l	99	82.514	Oryzias_melastigma
ENSTRUG00000008410	rad54l	99	75.401	ENSOARG00000002264	RAD54L	99	75.401	Ovis_aries
ENSTRUG00000008410	rad54l	99	76.408	ENSPPAG00000031222	RAD54L	99	76.408	Pan_paniscus
ENSTRUG00000008410	rad54l	99	74.263	ENSPPRG00000010317	RAD54L	99	74.263	Panthera_pardus
ENSTRUG00000008410	rad54l	99	74.263	ENSPTIG00000012200	RAD54L	99	74.263	Panthera_tigris_altaica
ENSTRUG00000008410	rad54l	99	76.408	ENSPTRG00000000689	RAD54L	99	76.408	Pan_troglodytes
ENSTRUG00000008410	rad54l	99	76.542	ENSPANG00000016295	RAD54L	99	76.542	Papio_anubis
ENSTRUG00000008410	rad54l	99	75.646	ENSPKIG00000016172	rad54l	99	75.918	Paramormyrops_kingsleyae
ENSTRUG00000008410	rad54l	96	82.301	ENSPSIG00000003258	RAD54L	92	82.301	Pelodiscus_sinensis
ENSTRUG00000008410	rad54l	99	78.639	ENSPMGG00000016335	rad54l	99	78.639	Periophthalmus_magnuspinnatus
ENSTRUG00000008410	rad54l	99	75.639	ENSPEMG00000011422	Rad54l	99	75.639	Peromyscus_maniculatus_bairdii
ENSTRUG00000008410	rad54l	99	67.068	ENSPMAG00000007719	rad54l	99	67.068	Petromyzon_marinus
ENSTRUG00000008410	rad54l	99	76.210	ENSPCIG00000029032	RAD54L	99	76.210	Phascolarctos_cinereus
ENSTRUG00000008410	rad54l	86	86.721	ENSPFOG00000013732	rad54l	96	86.721	Poecilia_formosa
ENSTRUG00000008410	rad54l	86	83.657	ENSPLAG00000023416	rad54l	100	83.657	Poecilia_latipinna
ENSTRUG00000008410	rad54l	91	81.157	ENSPMEG00000008299	rad54l	99	81.129	Poecilia_mexicana
ENSTRUG00000008410	rad54l	99	81.191	ENSPREG00000019955	rad54l	99	81.191	Poecilia_reticulata
ENSTRUG00000008410	rad54l	99	64.793	ENSPPYG00000001398	RAD54L	99	64.793	Pongo_abelii
ENSTRUG00000008410	rad54l	78	77.670	ENSPCAG00000005323	RAD54L	80	77.670	Procavia_capensis
ENSTRUG00000008410	rad54l	99	75.871	ENSPCOG00000015423	RAD54L	99	75.871	Propithecus_coquereli
ENSTRUG00000008410	rad54l	100	82.869	ENSPNYG00000002942	rad54l	99	83.148	Pundamilia_nyererei
ENSTRUG00000008410	rad54l	99	81.377	ENSPNAG00000012483	rad54l	99	81.377	Pygocentrus_nattereri
ENSTRUG00000008410	rad54l	99	75.067	ENSRNOG00000013148	Rad54l	99	75.067	Rattus_norvegicus
ENSTRUG00000008410	rad54l	99	76.676	ENSRBIG00000043495	RAD54L	99	76.676	Rhinopithecus_bieti
ENSTRUG00000008410	rad54l	99	76.676	ENSRROG00000020844	RAD54L	99	76.676	Rhinopithecus_roxellana
ENSTRUG00000008410	rad54l	85	49.077	YGL163C	RAD54	70	48.980	Saccharomyces_cerevisiae
ENSTRUG00000008410	rad54l	99	76.810	ENSSBOG00000024672	RAD54L	99	76.810	Saimiri_boliviensis_boliviensis
ENSTRUG00000008410	rad54l	99	76.273	ENSSHAG00000000110	RAD54L	99	76.273	Sarcophilus_harrisii
ENSTRUG00000008410	rad54l	99	85.135	ENSSDUG00000019147	rad54l	99	85.135	Seriola_dumerili
ENSTRUG00000008410	rad54l	99	89.124	ENSSLDG00000012330	rad54l	99	89.124	Seriola_lalandi_dorsalis
ENSTRUG00000008410	rad54l	83	76.886	ENSSARG00000006689	RAD54L	99	76.886	Sorex_araneus
ENSTRUG00000008410	rad54l	99	83.762	ENSSPAG00000011016	rad54l	99	83.762	Stegastes_partitus
ENSTRUG00000008410	rad54l	99	75.201	ENSSSCG00000003905	RAD54L	99	75.201	Sus_scrofa
ENSTRUG00000008410	rad54l	99	76.210	ENSTGUG00000008233	RAD54L	99	76.613	Taeniopygia_guttata
ENSTRUG00000008410	rad54l	100	86.141	ENSTNIG00000004716	rad54l	100	86.141	Tetraodon_nigroviridis
ENSTRUG00000008410	rad54l	99	71.984	ENSTTRG00000006315	RAD54L	99	71.984	Tursiops_truncatus
ENSTRUG00000008410	rad54l	99	74.528	ENSUAMG00000011824	RAD54L	99	74.528	Ursus_americanus
ENSTRUG00000008410	rad54l	99	73.450	ENSUMAG00000023603	RAD54L	99	73.450	Ursus_maritimus
ENSTRUG00000008410	rad54l	99	75.067	ENSVVUG00000007201	RAD54L	99	75.067	Vulpes_vulpes
ENSTRUG00000008410	rad54l	99	72.841	ENSXETG00000004369	rad54l	100	72.841	Xenopus_tropicalis
ENSTRUG00000008410	rad54l	50	85.070	ENSXCOG00000016028	rad54l	84	79.849	Xiphophorus_couchianus