EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000008602 (Gene tree)
Gene ID: 101061178
Gene Symbol: RNPS1
Alias: wu:fa19a11|zgc:65775
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2540 bases
Position: chr5:7083405-7085944
Accession: 101061178
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000021579	RRM_1	PF00076.22	2.8e-15	1	1
ENSTRUP00000051891	RRM_1	PF00076.22	3.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000053588	RNPS1-201	1337	-	ENSTRUP00000051891	316 (aa)	-	-
ENSTRUT00000021667	RNPS1-202	1235	XM_011603987	ENSTRUP00000021579	282 (aa)	XP_011602289	H2TA89

Gene Model

Click here to download ENSTRUG00000008602's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03013	RNA transport	KEGG
tru03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000008602's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000008602	RNPS1	84	71.784	ENSG00000205937	RNPS1	85	71.784	Homo_sapiens
ENSTRUG00000008602	RNPS1	83	78.541	ENSAPOG00000017310	RNPS1	74	76.293	Acanthochromis_polyacanthus
ENSTRUG00000008602	RNPS1	84	71.667	ENSAMEG00000017861	RNPS1	78	71.667	Ailuropoda_melanoleuca
ENSTRUG00000008602	RNPS1	77	69.585	ENSACIG00000014367	-	76	70.507	Amphilophus_citrinellus
ENSTRUG00000008602	RNPS1	83	78.541	ENSAOCG00000002404	RNPS1	83	76.824	Amphiprion_ocellaris
ENSTRUG00000008602	RNPS1	82	78.448	ENSAPEG00000006497	RNPS1	80	76.724	Amphiprion_percula
ENSTRUG00000008602	RNPS1	83	81.974	ENSATEG00000024267	RNPS1	83	80.258	Anabas_testudineus
ENSTRUG00000008602	RNPS1	84	52.033	ENSAPLG00000006231	RNPS1	56	75.000	Anas_platyrhynchos
ENSTRUG00000008602	RNPS1	75	67.757	ENSACAG00000004088	RNPS1	87	67.442	Anolis_carolinensis
ENSTRUG00000008602	RNPS1	84	71.369	ENSANAG00000028802	RNPS1	85	71.369	Aotus_nancymaae
ENSTRUG00000008602	RNPS1	76	69.907	ENSANAG00000029802	-	83	69.907	Aotus_nancymaae
ENSTRUG00000008602	RNPS1	83	77.682	ENSACLG00000025942	RNPS1	82	75.536	Astatotilapia_calliptera
ENSTRUG00000008602	RNPS1	82	59.914	ENSACLG00000021537	-	86	64.103	Astatotilapia_calliptera
ENSTRUG00000008602	RNPS1	83	71.610	ENSAMXG00000006330	-	82	65.678	Astyanax_mexicanus
ENSTRUG00000008602	RNPS1	85	71.721	ENSBTAG00000009969	RNPS1	86	71.721	Bos_taurus
ENSTRUG00000008602	RNPS1	84	71.784	ENSCJAG00000014969	RNPS1	90	68.372	Callithrix_jacchus
ENSTRUG00000008602	RNPS1	84	71.667	ENSCAFG00000019397	RNPS1	78	71.667	Canis_familiaris
ENSTRUG00000008602	RNPS1	84	71.667	ENSCAFG00020026159	RNPS1	86	69.802	Canis_lupus_dingo
ENSTRUG00000008602	RNPS1	72	69.756	ENSCHIG00000014621	-	69	68.932	Capra_hircus
ENSTRUG00000008602	RNPS1	84	71.784	ENSTSYG00000001629	RNPS1	85	71.784	Carlito_syrichta
ENSTRUG00000008602	RNPS1	75	68.837	ENSTSYG00000031848	-	87	68.837	Carlito_syrichta
ENSTRUG00000008602	RNPS1	84	71.667	ENSCAPG00000007731	RNPS1	78	71.667	Cavia_aperea
ENSTRUG00000008602	RNPS1	84	71.784	ENSCPOG00000002066	RNPS1	85	71.784	Cavia_porcellus
ENSTRUG00000008602	RNPS1	84	72.199	ENSCCAG00000034480	RNPS1	85	72.199	Cebus_capucinus
ENSTRUG00000008602	RNPS1	84	71.784	ENSCATG00000013756	RNPS1	85	71.784	Cercocebus_atys
ENSTRUG00000008602	RNPS1	93	66.415	ENSCATG00000042361	-	80	67.083	Cercocebus_atys
ENSTRUG00000008602	RNPS1	84	71.784	ENSCLAG00000015546	RNPS1	85	71.784	Chinchilla_lanigera
ENSTRUG00000008602	RNPS1	97	71.739	ENSCSAG00000005219	-	81	70.124	Chlorocebus_sabaeus
ENSTRUG00000008602	RNPS1	84	72.385	ENSCHOG00000004866	RNPS1	78	72.385	Choloepus_hoffmanni
ENSTRUG00000008602	RNPS1	72	55.024	ENSCANG00000030189	-	79	55.769	Colobus_angolensis_palliatus
ENSTRUG00000008602	RNPS1	84	71.784	ENSCANG00000041307	RNPS1	85	71.784	Colobus_angolensis_palliatus
ENSTRUG00000008602	RNPS1	84	71.784	ENSCGRG00001020431	Rnps1	85	71.784	Cricetulus_griseus_chok1gshd
ENSTRUG00000008602	RNPS1	76	71.429	ENSCGRG00000014021	Rnps1	77	71.429	Cricetulus_griseus_crigri
ENSTRUG00000008602	RNPS1	82	74.138	ENSCSEG00000015997	RNPS1	80	72.414	Cynoglossus_semilaevis
ENSTRUG00000008602	RNPS1	77	76.147	ENSCVAG00000010868	RNPS1	76	73.611	Cyprinodon_variegatus
ENSTRUG00000008602	RNPS1	70	54.545	ENSDNOG00000038751	-	99	54.000	Dasypus_novemcinctus
ENSTRUG00000008602	RNPS1	84	71.667	ENSDNOG00000016081	RNPS1	78	71.667	Dasypus_novemcinctus
ENSTRUG00000008602	RNPS1	84	71.784	ENSDORG00000001755	Rnps1	85	71.784	Dipodomys_ordii
ENSTRUG00000008602	RNPS1	84	71.667	ENSEASG00005004862	RNPS1	78	71.667	Equus_asinus_asinus
ENSTRUG00000008602	RNPS1	73	68.750	ENSECAG00000023288	RNPS1	75	68.750	Equus_caballus
ENSTRUG00000008602	RNPS1	84	72.199	ENSFCAG00000007690	RNPS1	85	72.199	Felis_catus
ENSTRUG00000008602	RNPS1	84	72.917	ENSFALG00000004868	RNPS1	84	72.917	Ficedula_albicollis
ENSTRUG00000008602	RNPS1	84	72.199	ENSFDAG00000003386	RNPS1	85	72.199	Fukomys_damarensis
ENSTRUG00000008602	RNPS1	77	82.569	ENSFHEG00000011705	RNPS1	76	77.778	Fundulus_heteroclitus
ENSTRUG00000008602	RNPS1	84	73.029	ENSGALG00000009288	RNPS1	85	73.029	Gallus_gallus
ENSTRUG00000008602	RNPS1	77	76.606	ENSGAFG00000005457	RNPS1	76	74.074	Gambusia_affinis
ENSTRUG00000008602	RNPS1	83	59.426	ENSGACG00000005641	-	84	59.426	Gasterosteus_aculeatus
ENSTRUG00000008602	RNPS1	83	77.682	ENSGACG00000011261	RNPS1	83	75.107	Gasterosteus_aculeatus
ENSTRUG00000008602	RNPS1	84	72.083	ENSGAGG00000010452	RNPS1	78	72.083	Gopherus_agassizii
ENSTRUG00000008602	RNPS1	73	69.712	ENSGGOG00000026421	-	79	69.712	Gorilla_gorilla
ENSTRUG00000008602	RNPS1	84	71.784	ENSGGOG00000014275	RNPS1	85	71.784	Gorilla_gorilla
ENSTRUG00000008602	RNPS1	83	77.253	ENSHBUG00000002494	RNPS1	82	75.107	Haplochromis_burtoni
ENSTRUG00000008602	RNPS1	84	71.784	ENSHGLG00000013957	RNPS1	85	71.784	Heterocephalus_glaber_female
ENSTRUG00000008602	RNPS1	79	69.333	ENSHGLG00000006292	-	87	70.968	Heterocephalus_glaber_female
ENSTRUG00000008602	RNPS1	91	69.349	ENSHGLG00100015267	-	86	68.880	Heterocephalus_glaber_male
ENSTRUG00000008602	RNPS1	84	71.784	ENSHGLG00100003539	RNPS1	85	71.784	Heterocephalus_glaber_male
ENSTRUG00000008602	RNPS1	72	63.107	ENSHGLG00100011610	-	84	65.534	Heterocephalus_glaber_male
ENSTRUG00000008602	RNPS1	84	64.583	ENSHGLG00100001721	-	78	63.333	Heterocephalus_glaber_male
ENSTRUG00000008602	RNPS1	76	57.339	ENSHGLG00100017879	-	68	56.585	Heterocephalus_glaber_male
ENSTRUG00000008602	RNPS1	83	76.151	ENSHCOG00000004424	RNPS1	83	72.385	Hippocampus_comes
ENSTRUG00000008602	RNPS1	83	73.729	ENSIPUG00000011746	rnps1	91	73.729	Ictalurus_punctatus
ENSTRUG00000008602	RNPS1	84	72.199	ENSJJAG00000015576	-	85	72.199	Jaculus_jaculus
ENSTRUG00000008602	RNPS1	84	63.180	ENSJJAG00000019234	-	68	59.833	Jaculus_jaculus
ENSTRUG00000008602	RNPS1	83	85.837	ENSKMAG00000009135	RNPS1	82	74.678	Kryptolebias_marmoratus
ENSTRUG00000008602	RNPS1	84	71.784	ENSMFAG00000042142	RNPS1	85	71.784	Macaca_fascicularis
ENSTRUG00000008602	RNPS1	84	64.583	ENSMFAG00000044121	-	83	61.066	Macaca_fascicularis
ENSTRUG00000008602	RNPS1	71	70.098	ENSMMUG00000019238	-	79	70.098	Macaca_mulatta
ENSTRUG00000008602	RNPS1	86	68.163	ENSMMUG00000041726	-	84	67.500	Macaca_mulatta
ENSTRUG00000008602	RNPS1	86	68.163	ENSMNEG00000024827	-	84	67.500	Macaca_nemestrina
ENSTRUG00000008602	RNPS1	73	65.865	ENSMLEG00000040232	-	81	65.865	Mandrillus_leucophaeus
ENSTRUG00000008602	RNPS1	84	71.784	ENSMLEG00000036928	RNPS1	85	71.784	Mandrillus_leucophaeus
ENSTRUG00000008602	RNPS1	82	71.368	ENSMAMG00000021148	-	81	67.094	Mastacembelus_armatus
ENSTRUG00000008602	RNPS1	83	81.116	ENSMAMG00000021609	-	83	79.399	Mastacembelus_armatus
ENSTRUG00000008602	RNPS1	83	77.682	ENSMZEG00005012742	RNPS1	82	75.536	Maylandia_zebra
ENSTRUG00000008602	RNPS1	83	60.086	ENSMZEG00005006256	-	83	64.255	Maylandia_zebra
ENSTRUG00000008602	RNPS1	77	71.689	ENSMGAG00000010042	RNPS1	89	72.222	Meleagris_gallopavo
ENSTRUG00000008602	RNPS1	84	71.784	ENSMICG00000031543	RNPS1	85	71.784	Microcebus_murinus
ENSTRUG00000008602	RNPS1	84	71.784	ENSMOCG00000003429	Rnps1	85	71.784	Microtus_ochrogaster
ENSTRUG00000008602	RNPS1	76	76.744	ENSMMOG00000010863	RNPS1	76	76.744	Mola_mola
ENSTRUG00000008602	RNPS1	84	71.784	ENSMUSG00000034681	Rnps1	85	71.784	Mus_musculus
ENSTRUG00000008602	RNPS1	84	71.784	MGP_PahariEiJ_G0023498	Rnps1	85	71.784	Mus_pahari
ENSTRUG00000008602	RNPS1	84	71.784	MGP_SPRETEiJ_G0022092	Rnps1	85	71.784	Mus_spretus
ENSTRUG00000008602	RNPS1	84	71.667	ENSMLUG00000016808	RNPS1	78	71.667	Myotis_lucifugus
ENSTRUG00000008602	RNPS1	84	71.784	ENSNGAG00000023702	Rnps1	85	71.784	Nannospalax_galili
ENSTRUG00000008602	RNPS1	77	71.429	ENSNBRG00000023437	RNPS1	76	71.163	Neolamprologus_brichardi
ENSTRUG00000008602	RNPS1	83	60.086	ENSNBRG00000014540	-	85	64.255	Neolamprologus_brichardi
ENSTRUG00000008602	RNPS1	88	70.800	ENSNLEG00000009243	RNPS1	98	70.204	Nomascus_leucogenys
ENSTRUG00000008602	RNPS1	84	71.667	ENSMEUG00000008882	RNPS1	78	71.667	Notamacropus_eugenii
ENSTRUG00000008602	RNPS1	84	72.917	ENSOPRG00000016422	RNPS1	78	72.917	Ochotona_princeps
ENSTRUG00000008602	RNPS1	59	53.293	ENSODEG00000002513	-	52	47.899	Octodon_degus
ENSTRUG00000008602	RNPS1	52	45.399	ENSODEG00000003850	-	54	66.129	Octodon_degus
ENSTRUG00000008602	RNPS1	83	60.086	ENSONIG00000019627	-	83	64.255	Oreochromis_niloticus
ENSTRUG00000008602	RNPS1	83	72.103	ENSORLG00000008033	RNPS1	94	70.192	Oryzias_latipes
ENSTRUG00000008602	RNPS1	82	69.397	ENSORLG00020020207	RNPS1	82	68.103	Oryzias_latipes_hni
ENSTRUG00000008602	RNPS1	82	69.828	ENSORLG00015000305	-	82	68.534	Oryzias_latipes_hsok
ENSTRUG00000008602	RNPS1	84	71.667	ENSOARG00000018056	-	67	71.667	Ovis_aries
ENSTRUG00000008602	RNPS1	72	69.756	ENSPPAG00000037836	-	86	69.756	Pan_paniscus
ENSTRUG00000008602	RNPS1	87	68.145	ENSPPAG00000011845	RNPS1	86	67.220	Pan_paniscus
ENSTRUG00000008602	RNPS1	84	72.199	ENSPPRG00000011255	RNPS1	85	72.199	Panthera_pardus
ENSTRUG00000008602	RNPS1	58	63.190	ENSPTIG00000015643	RNPS1	65	75.000	Panthera_tigris_altaica
ENSTRUG00000008602	RNPS1	84	71.784	ENSPTRG00000031310	RNPS1	85	71.784	Pan_troglodytes
ENSTRUG00000008602	RNPS1	73	68.750	ENSPTRG00000046326	-	81	68.750	Pan_troglodytes
ENSTRUG00000008602	RNPS1	84	71.784	ENSPANG00000015748	RNPS1	85	71.784	Papio_anubis
ENSTRUG00000008602	RNPS1	69	51.795	ENSPANG00000033576	-	72	51.269	Papio_anubis
ENSTRUG00000008602	RNPS1	83	73.617	ENSPKIG00000023465	RNPS1	83	73.617	Paramormyrops_kingsleyae
ENSTRUG00000008602	RNPS1	84	72.083	ENSPSIG00000006048	RNPS1	78	72.083	Pelodiscus_sinensis
ENSTRUG00000008602	RNPS1	84	71.784	ENSPEMG00000012797	Rnps1	85	71.784	Peromyscus_maniculatus_bairdii
ENSTRUG00000008602	RNPS1	84	71.784	ENSPCIG00000025012	RNPS1	85	71.784	Phascolarctos_cinereus
ENSTRUG00000008602	RNPS1	58	65.031	ENSPCIG00000016114	-	60	74.194	Phascolarctos_cinereus
ENSTRUG00000008602	RNPS1	77	77.523	ENSPFOG00000009978	RNPS1	76	75.000	Poecilia_formosa
ENSTRUG00000008602	RNPS1	77	77.523	ENSPLAG00000009343	RNPS1	76	75.000	Poecilia_latipinna
ENSTRUG00000008602	RNPS1	77	77.523	ENSPMEG00000008552	RNPS1	76	75.000	Poecilia_mexicana
ENSTRUG00000008602	RNPS1	77	77.523	ENSPREG00000001843	RNPS1	76	75.000	Poecilia_reticulata
ENSTRUG00000008602	RNPS1	84	69.583	ENSPCAG00000004514	RNPS1	78	69.583	Procavia_capensis
ENSTRUG00000008602	RNPS1	84	71.784	ENSPCOG00000005478	RNPS1	85	71.784	Propithecus_coquereli
ENSTRUG00000008602	RNPS1	84	71.667	ENSPVAG00000005105	RNPS1	78	71.667	Pteropus_vampyrus
ENSTRUG00000008602	RNPS1	83	77.682	ENSPNYG00000000585	RNPS1	82	75.536	Pundamilia_nyererei
ENSTRUG00000008602	RNPS1	83	72.881	ENSPNAG00000025479	RNPS1	82	66.102	Pygocentrus_nattereri
ENSTRUG00000008602	RNPS1	83	71.429	ENSPNAG00000017784	-	83	73.950	Pygocentrus_nattereri
ENSTRUG00000008602	RNPS1	84	71.667	ENSRNOG00000008703	Rnps1	78	71.667	Rattus_norvegicus
ENSTRUG00000008602	RNPS1	84	71.784	ENSRBIG00000038965	-	88	71.667	Rhinopithecus_bieti
ENSTRUG00000008602	RNPS1	84	71.784	ENSRROG00000041252	RNPS1	85	71.784	Rhinopithecus_roxellana
ENSTRUG00000008602	RNPS1	84	71.784	ENSSBOG00000027927	RNPS1	85	71.784	Saimiri_boliviensis_boliviensis
ENSTRUG00000008602	RNPS1	84	71.667	ENSSHAG00000016951	RNPS1	78	71.667	Sarcophilus_harrisii
ENSTRUG00000008602	RNPS1	82	74.043	ENSSFOG00015019341	-	73	65.957	Scleropages_formosus
ENSTRUG00000008602	RNPS1	83	73.729	ENSSFOG00015022746	RNPS1	85	68.644	Scleropages_formosus
ENSTRUG00000008602	RNPS1	83	77.253	ENSSMAG00000016933	RNPS1	82	75.107	Scophthalmus_maximus
ENSTRUG00000008602	RNPS1	83	81.116	ENSSDUG00000011453	RNPS1	83	79.399	Seriola_dumerili
ENSTRUG00000008602	RNPS1	80	80.088	ENSSLDG00000021341	RNPS1	81	77.876	Seriola_lalandi_dorsalis
ENSTRUG00000008602	RNPS1	84	71.667	ENSSPUG00000016588	RNPS1	78	71.667	Sphenodon_punctatus
ENSTRUG00000008602	RNPS1	83	79.828	ENSSPAG00000009383	RNPS1	83	78.112	Stegastes_partitus
ENSTRUG00000008602	RNPS1	84	72.083	ENSSSCG00000008048	RNPS1	78	72.083	Sus_scrofa
ENSTRUG00000008602	RNPS1	84	72.500	ENSTGUG00000003237	RNPS1	84	72.500	Taeniopygia_guttata
ENSTRUG00000008602	RNPS1	99	95.423	ENSTNIG00000009753	RNPS1	99	95.423	Tetraodon_nigroviridis
ENSTRUG00000008602	RNPS1	87	72.691	ENSTBEG00000009098	RNPS1	88	71.667	Tupaia_belangeri
ENSTRUG00000008602	RNPS1	84	71.667	ENSTTRG00000008220	RNPS1	78	71.667	Tursiops_truncatus
ENSTRUG00000008602	RNPS1	84	71.667	ENSUAMG00000004462	RNPS1	88	71.667	Ursus_americanus
ENSTRUG00000008602	RNPS1	84	71.667	ENSUMAG00000022327	RNPS1	78	71.667	Ursus_maritimus
ENSTRUG00000008602	RNPS1	84	71.667	ENSVVUG00000009244	RNPS1	78	71.667	Vulpes_vulpes
ENSTRUG00000008602	RNPS1	80	66.087	ENSXETG00000024439	rnps1	71	67.431	Xenopus_tropicalis
ENSTRUG00000008602	RNPS1	83	82.403	ENSXMAG00000004827	RNPS1	82	72.103	Xiphophorus_maculatus