EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000008799 (Gene tree)
Gene ID: 101065174
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3414 bases
Position: chrHE591726.1:196040-199453
Accession: 101065174
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000022105	RTC	PF01137.21	3.9e-87	1	1
ENSTRUP00000022105	RTC_insert	PF05189.13	1.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000022195	-	1638	XM_003977503	ENSTRUP00000022105	364 (aa)	XP_003977552	H2TBR3

Gene Model

Click here to download ENSTRUG00000008799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000008799's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000008799	rtca	100	71.038	ENSG00000137996	RTCA	100	71.038	Homo_sapiens
ENSTRUG00000008799	rtca	100	88.736	ENSAPOG00000001345	rtca	99	88.736	Acanthochromis_polyacanthus
ENSTRUG00000008799	rtca	73	72.862	ENSAMEG00000008855	RTCA	100	72.862	Ailuropoda_melanoleuca
ENSTRUG00000008799	rtca	100	88.736	ENSACIG00000019643	rtca	100	88.736	Amphilophus_citrinellus
ENSTRUG00000008799	rtca	100	89.286	ENSAOCG00000014979	rtca	99	89.286	Amphiprion_ocellaris
ENSTRUG00000008799	rtca	100	89.286	ENSAPEG00000006945	rtca	99	89.286	Amphiprion_percula
ENSTRUG00000008799	rtca	96	92.264	ENSATEG00000006315	rtca	96	92.264	Anabas_testudineus
ENSTRUG00000008799	rtca	96	67.989	ENSAPLG00000015430	RTCA	100	67.989	Anas_platyrhynchos
ENSTRUG00000008799	rtca	100	71.038	ENSANAG00000025446	RTCA	100	71.038	Aotus_nancymaae
ENSTRUG00000008799	rtca	100	89.560	ENSACLG00000020770	rtca	99	89.560	Astatotilapia_calliptera
ENSTRUG00000008799	rtca	100	78.846	ENSAMXG00000043271	rtca	100	78.846	Astyanax_mexicanus
ENSTRUG00000008799	rtca	100	71.585	ENSBTAG00000006321	RTCA	100	71.585	Bos_taurus
ENSTRUG00000008799	rtca	100	71.311	ENSCJAG00000003398	RTCA	100	71.311	Callithrix_jacchus
ENSTRUG00000008799	rtca	100	70.492	ENSCAFG00000020010	RTCA	68	70.492	Canis_familiaris
ENSTRUG00000008799	rtca	100	70.492	ENSCAFG00020011528	RTCA	57	70.492	Canis_lupus_dingo
ENSTRUG00000008799	rtca	100	71.311	ENSCHIG00000018937	RTCA	100	71.311	Capra_hircus
ENSTRUG00000008799	rtca	100	71.311	ENSTSYG00000011305	RTCA	100	71.311	Carlito_syrichta
ENSTRUG00000008799	rtca	100	70.765	ENSCCAG00000021844	RTCA	99	71.772	Cebus_capucinus
ENSTRUG00000008799	rtca	100	68.865	ENSCATG00000019364	RTCA	100	71.521	Cercocebus_atys
ENSTRUG00000008799	rtca	87	72.785	ENSCLAG00000006125	RTCA	100	72.785	Chinchilla_lanigera
ENSTRUG00000008799	rtca	100	71.038	ENSCSAG00000001509	RTCA	100	71.038	Chlorocebus_sabaeus
ENSTRUG00000008799	rtca	100	69.945	ENSCHOG00000005211	RTCA	100	69.945	Choloepus_hoffmanni
ENSTRUG00000008799	rtca	100	67.397	ENSCPBG00000026658	RTCA	100	67.397	Chrysemys_picta_bellii
ENSTRUG00000008799	rtca	98	56.546	ENSCING00000007875	-	98	56.546	Ciona_intestinalis
ENSTRUG00000008799	rtca	98	55.989	ENSCSAVG00000007269	-	98	55.989	Ciona_savignyi
ENSTRUG00000008799	rtca	100	70.765	ENSCANG00000040106	RTCA	100	70.765	Colobus_angolensis_palliatus
ENSTRUG00000008799	rtca	73	72.119	ENSCGRG00001013163	Rtca	85	72.119	Cricetulus_griseus_chok1gshd
ENSTRUG00000008799	rtca	98	82.402	ENSCSEG00000000530	rtca	96	82.402	Cynoglossus_semilaevis
ENSTRUG00000008799	rtca	100	72.131	ENSCVAG00000021809	rtca	100	72.131	Cyprinodon_variegatus
ENSTRUG00000008799	rtca	100	79.670	ENSDARG00000002215	rtca	100	79.670	Danio_rerio
ENSTRUG00000008799	rtca	100	71.311	ENSDNOG00000000456	RTCA	100	71.311	Dasypus_novemcinctus
ENSTRUG00000008799	rtca	100	71.311	ENSDORG00000005448	Rtca	100	71.311	Dipodomys_ordii
ENSTRUG00000008799	rtca	98	40.336	FBgn0025630	Rtca	98	40.336	Drosophila_melanogaster
ENSTRUG00000008799	rtca	94	53.488	ENSEBUG00000008556	rtca	95	53.488	Eptatretus_burgeri
ENSTRUG00000008799	rtca	100	71.038	ENSEASG00005015926	RTCA	100	71.038	Equus_asinus_asinus
ENSTRUG00000008799	rtca	100	71.038	ENSECAG00000019831	RTCA	100	71.038	Equus_caballus
ENSTRUG00000008799	rtca	91	64.162	ENSEEUG00000001165	RTCA	100	64.162	Erinaceus_europaeus
ENSTRUG00000008799	rtca	99	78.177	ENSELUG00000003741	rtca	99	78.177	Esox_lucius
ENSTRUG00000008799	rtca	100	71.038	ENSFCAG00000024460	RTCA	100	71.038	Felis_catus
ENSTRUG00000008799	rtca	98	66.116	ENSFALG00000002443	RTCA	98	66.116	Ficedula_albicollis
ENSTRUG00000008799	rtca	98	56.077	ENSFDAG00000016084	-	100	56.077	Fukomys_damarensis
ENSTRUG00000008799	rtca	100	70.219	ENSFDAG00000012070	-	100	70.219	Fukomys_damarensis
ENSTRUG00000008799	rtca	68	76.829	ENSFHEG00000002868	rtca	97	80.444	Fundulus_heteroclitus
ENSTRUG00000008799	rtca	100	79.945	ENSGMOG00000013264	rtca	100	79.945	Gadus_morhua
ENSTRUG00000008799	rtca	100	68.493	ENSGALG00000005277	RTCA	100	68.493	Gallus_gallus
ENSTRUG00000008799	rtca	100	88.187	ENSGAFG00000011853	rtca	99	88.187	Gambusia_affinis
ENSTRUG00000008799	rtca	100	88.736	ENSGACG00000013497	rtca	100	88.736	Gasterosteus_aculeatus
ENSTRUG00000008799	rtca	80	67.577	ENSGAGG00000023306	RTCA	100	67.577	Gopherus_agassizii
ENSTRUG00000008799	rtca	100	69.945	ENSGGOG00000044018	-	100	69.945	Gorilla_gorilla
ENSTRUG00000008799	rtca	100	70.492	ENSGGOG00000009546	-	100	70.550	Gorilla_gorilla
ENSTRUG00000008799	rtca	100	89.560	ENSHBUG00000002114	rtca	99	89.560	Haplochromis_burtoni
ENSTRUG00000008799	rtca	100	70.219	ENSHGLG00000002617	RTCA	100	70.219	Heterocephalus_glaber_female
ENSTRUG00000008799	rtca	100	70.219	ENSHGLG00100006056	RTCA	100	70.219	Heterocephalus_glaber_male
ENSTRUG00000008799	rtca	100	76.099	ENSHCOG00000020628	rtca	89	76.099	Hippocampus_comes
ENSTRUG00000008799	rtca	100	79.396	ENSIPUG00000024803	rtca	100	79.396	Ictalurus_punctatus
ENSTRUG00000008799	rtca	100	66.667	ENSSTOG00000013528	-	100	66.667	Ictidomys_tridecemlineatus
ENSTRUG00000008799	rtca	100	62.295	ENSSTOG00000033099	-	100	62.295	Ictidomys_tridecemlineatus
ENSTRUG00000008799	rtca	100	51.781	ENSJJAG00000016178	Rtca	100	51.781	Jaculus_jaculus
ENSTRUG00000008799	rtca	100	87.912	ENSKMAG00000006651	rtca	99	87.912	Kryptolebias_marmoratus
ENSTRUG00000008799	rtca	99	88.643	ENSLBEG00000028971	rtca	99	88.643	Labrus_bergylta
ENSTRUG00000008799	rtca	88	88.401	ENSLBEG00000002448	-	99	88.401	Labrus_bergylta
ENSTRUG00000008799	rtca	100	68.767	ENSLACG00000013666	RTCA	100	68.767	Latimeria_chalumnae
ENSTRUG00000008799	rtca	100	76.164	ENSLOCG00000000093	rtca	99	76.164	Lepisosteus_oculatus
ENSTRUG00000008799	rtca	100	70.219	ENSLAFG00000001473	RTCA	100	70.219	Loxodonta_africana
ENSTRUG00000008799	rtca	100	71.038	ENSMFAG00000034132	RTCA	100	71.038	Macaca_fascicularis
ENSTRUG00000008799	rtca	100	71.038	ENSMMUG00000019105	RTCA	100	71.038	Macaca_mulatta
ENSTRUG00000008799	rtca	84	71.197	ENSMNEG00000037163	RTCA	100	71.197	Macaca_nemestrina
ENSTRUG00000008799	rtca	100	58.743	ENSMLEG00000042151	RTCA	100	58.743	Mandrillus_leucophaeus
ENSTRUG00000008799	rtca	100	91.484	ENSMAMG00000016536	rtca	100	91.484	Mastacembelus_armatus
ENSTRUG00000008799	rtca	100	89.560	ENSMZEG00005017945	rtca	99	89.560	Maylandia_zebra
ENSTRUG00000008799	rtca	87	69.182	ENSMGAG00000006892	RTCA	99	69.182	Meleagris_gallopavo
ENSTRUG00000008799	rtca	100	71.311	ENSMAUG00000008488	Rtca	100	71.311	Mesocricetus_auratus
ENSTRUG00000008799	rtca	84	71.845	ENSMICG00000008643	RTCA	100	71.845	Microcebus_murinus
ENSTRUG00000008799	rtca	100	71.038	ENSMOCG00000016660	Rtca	100	71.038	Microtus_ochrogaster
ENSTRUG00000008799	rtca	84	92.508	ENSMMOG00000007750	rtca	100	92.508	Mola_mola
ENSTRUG00000008799	rtca	100	71.585	ENSMODG00000003557	RTCA	100	71.585	Monodelphis_domestica
ENSTRUG00000008799	rtca	100	90.934	ENSMALG00000020844	rtca	100	90.934	Monopterus_albus
ENSTRUG00000008799	rtca	100	69.672	MGP_CAROLIEiJ_G0025565	Rtca	100	70.423	Mus_caroli
ENSTRUG00000008799	rtca	100	69.399	ENSMUSG00000000339	Rtca	100	70.423	Mus_musculus
ENSTRUG00000008799	rtca	100	69.672	MGP_PahariEiJ_G0027011	Rtca	100	70.423	Mus_pahari
ENSTRUG00000008799	rtca	100	69.945	MGP_SPRETEiJ_G0026515	Rtca	100	71.127	Mus_spretus
ENSTRUG00000008799	rtca	100	71.038	ENSMPUG00000012119	RTCA	100	71.038	Mustela_putorius_furo
ENSTRUG00000008799	rtca	100	67.575	ENSMLUG00000009922	RTCA	100	67.575	Myotis_lucifugus
ENSTRUG00000008799	rtca	100	70.219	ENSNGAG00000011540	Rtca	99	70.219	Nannospalax_galili
ENSTRUG00000008799	rtca	100	89.560	ENSNBRG00000003062	rtca	99	89.560	Neolamprologus_brichardi
ENSTRUG00000008799	rtca	100	70.765	ENSNLEG00000031426	RTCA	100	70.765	Nomascus_leucogenys
ENSTRUG00000008799	rtca	73	67.658	ENSOPRG00000012092	RTCA	71	67.658	Ochotona_princeps
ENSTRUG00000008799	rtca	95	71.839	ENSODEG00000006990	RTCA	96	72.080	Octodon_degus
ENSTRUG00000008799	rtca	100	89.835	ENSONIG00000007753	rtca	99	89.835	Oreochromis_niloticus
ENSTRUG00000008799	rtca	87	72.871	ENSOANG00000012055	RTCA	98	72.871	Ornithorhynchus_anatinus
ENSTRUG00000008799	rtca	100	71.038	ENSOCUG00000014247	RTCA	100	71.038	Oryctolagus_cuniculus
ENSTRUG00000008799	rtca	100	89.011	ENSORLG00000013605	rtca	100	89.011	Oryzias_latipes
ENSTRUG00000008799	rtca	100	89.286	ENSORLG00020001904	rtca	100	89.286	Oryzias_latipes_hni
ENSTRUG00000008799	rtca	100	89.011	ENSORLG00015021064	rtca	100	89.011	Oryzias_latipes_hsok
ENSTRUG00000008799	rtca	100	88.187	ENSOMEG00000000756	rtca	100	88.187	Oryzias_melastigma
ENSTRUG00000008799	rtca	100	66.120	ENSOGAG00000005627	RTCA	100	66.120	Otolemur_garnettii
ENSTRUG00000008799	rtca	87	72.013	ENSOARG00000018122	RTCA	100	72.013	Ovis_aries
ENSTRUG00000008799	rtca	100	67.810	ENSPPAG00000035119	RTCA	100	70.227	Pan_paniscus
ENSTRUG00000008799	rtca	100	71.038	ENSPPRG00000000350	RTCA	100	71.038	Panthera_pardus
ENSTRUG00000008799	rtca	100	70.765	ENSPTIG00000012816	RTCA	100	70.765	Panthera_tigris_altaica
ENSTRUG00000008799	rtca	100	67.810	ENSPTRG00000001004	RTCA	100	70.227	Pan_troglodytes
ENSTRUG00000008799	rtca	100	71.038	ENSPANG00000000346	RTCA	100	71.038	Papio_anubis
ENSTRUG00000008799	rtca	100	80.495	ENSPKIG00000001653	rtca	100	80.495	Paramormyrops_kingsleyae
ENSTRUG00000008799	rtca	100	67.123	ENSPSIG00000011408	RTCA	100	67.123	Pelodiscus_sinensis
ENSTRUG00000008799	rtca	100	70.492	ENSPEMG00000018582	Rtca	100	70.492	Peromyscus_maniculatus_bairdii
ENSTRUG00000008799	rtca	99	56.233	ENSPMAG00000009110	rtca	98	56.233	Petromyzon_marinus
ENSTRUG00000008799	rtca	100	71.038	ENSPCIG00000007684	RTCA	100	71.038	Phascolarctos_cinereus
ENSTRUG00000008799	rtca	100	89.315	ENSPFOG00000004824	rtca	100	89.315	Poecilia_formosa
ENSTRUG00000008799	rtca	100	89.286	ENSPLAG00000011753	rtca	99	89.286	Poecilia_latipinna
ENSTRUG00000008799	rtca	100	89.286	ENSPMEG00000020469	rtca	99	89.286	Poecilia_mexicana
ENSTRUG00000008799	rtca	100	88.736	ENSPREG00000001365	rtca	99	88.736	Poecilia_reticulata
ENSTRUG00000008799	rtca	100	71.038	ENSPPYG00000001115	RTCA	100	71.038	Pongo_abelii
ENSTRUG00000008799	rtca	100	68.033	ENSPCAG00000005076	RTCA	100	68.033	Procavia_capensis
ENSTRUG00000008799	rtca	100	71.311	ENSPCOG00000005603	RTCA	100	71.311	Propithecus_coquereli
ENSTRUG00000008799	rtca	100	66.755	ENSPVAG00000009478	RTCA	100	66.755	Pteropus_vampyrus
ENSTRUG00000008799	rtca	100	89.560	ENSPNYG00000004722	rtca	99	89.560	Pundamilia_nyererei
ENSTRUG00000008799	rtca	100	79.945	ENSPNAG00000022270	rtca	100	79.945	Pygocentrus_nattereri
ENSTRUG00000008799	rtca	100	69.399	ENSRNOG00000014575	Rtca	100	69.399	Rattus_norvegicus
ENSTRUG00000008799	rtca	100	68.074	ENSRBIG00000041180	RTCA	100	70.550	Rhinopithecus_bieti
ENSTRUG00000008799	rtca	100	70.492	ENSRROG00000024929	RTCA	100	70.492	Rhinopithecus_roxellana
ENSTRUG00000008799	rtca	100	70.492	ENSSBOG00000028626	RTCA	100	70.492	Saimiri_boliviensis_boliviensis
ENSTRUG00000008799	rtca	100	71.038	ENSSHAG00000001758	RTCA	100	71.038	Sarcophilus_harrisii
ENSTRUG00000008799	rtca	99	84.765	ENSSMAG00000014680	rtca	98	84.765	Scophthalmus_maximus
ENSTRUG00000008799	rtca	98	90.782	ENSSDUG00000015585	rtca	98	90.331	Seriola_dumerili
ENSTRUG00000008799	rtca	96	91.404	ENSSLDG00000018985	rtca	95	91.404	Seriola_lalandi_dorsalis
ENSTRUG00000008799	rtca	87	66.246	ENSSARG00000013993	RTCA	100	66.246	Sorex_araneus
ENSTRUG00000008799	rtca	100	89.560	ENSSPAG00000011938	rtca	99	89.560	Stegastes_partitus
ENSTRUG00000008799	rtca	100	71.311	ENSSSCG00000006865	RTCA	100	71.311	Sus_scrofa
ENSTRUG00000008799	rtca	100	69.863	ENSTGUG00000005154	RTCA	100	69.863	Taeniopygia_guttata
ENSTRUG00000008799	rtca	100	92.308	ENSTNIG00000004725	rtca	100	92.308	Tetraodon_nigroviridis
ENSTRUG00000008799	rtca	58	56.190	ENSTBEG00000000943	RTCA	80	50.420	Tupaia_belangeri
ENSTRUG00000008799	rtca	100	68.602	ENSTTRG00000015327	RTCA	100	68.602	Tursiops_truncatus
ENSTRUG00000008799	rtca	96	69.341	ENSUAMG00000017265	RTCA	98	69.341	Ursus_americanus
ENSTRUG00000008799	rtca	100	70.492	ENSUMAG00000007881	RTCA	100	70.492	Ursus_maritimus
ENSTRUG00000008799	rtca	87	64.038	ENSVPAG00000001039	RTCA	84	64.038	Vicugna_pacos
ENSTRUG00000008799	rtca	100	70.492	ENSVVUG00000022041	RTCA	68	70.492	Vulpes_vulpes
ENSTRUG00000008799	rtca	99	57.766	ENSXETG00000031661	RTCA	99	57.766	Xenopus_tropicalis
ENSTRUG00000008799	rtca	100	77.473	ENSXCOG00000008002	rtca	100	77.473	Xiphophorus_couchianus
ENSTRUG00000008799	rtca	100	88.736	ENSXMAG00000005482	rtca	99	88.736	Xiphophorus_maculatus