EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTRUG00000008843 (Gene tree)
Gene ID
101062720
Gene Symbol
-
Alias
-
Full Name
poly(U)-binding-splicing factor PUF60-like
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Minus strand
Length
4845 bases
Position
chrHE591906.1:8270-13114
Accession
101062720
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTRUP00000022217RRM_1PF00076.229e-4512
ENSTRUP00000022217RRM_1PF00076.229e-4522
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTRUT00000022308-1440XM_011617093ENSTRUP00000022217479 (aa)XP_011615395H2TC25
Gene Model
Click here to download ENSTRUG00000008843's gene model file
Pathways
Pathway IDPathway NameSource
tru03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000008843's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTRUG00000008843-10078.599ENSTRUG00000005420puf60b9879.648
ENSTRUG00000008843-5635.294ENSTRUG00000005514u2af2a7137.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTRUG00000008843-10080.160ENSG00000179950PUF6010079.760Homo_sapiens
ENSTRUG00000008843-10081.891ENSAPOG00000001713puf60b9781.489Acanthochromis_polyacanthus
ENSTRUG00000008843-10075.534ENSAMEG00000006406PUF609275.534Ailuropoda_melanoleuca
ENSTRUG00000008843-10080.488ENSACIG00000003263-9980.606Amphilophus_citrinellus
ENSTRUG00000008843-10078.599ENSACIG00000021705puf60b10078.988Amphilophus_citrinellus
ENSTRUG00000008843-10086.024ENSAOCG00000015558-9786.024Amphiprion_ocellaris
ENSTRUG00000008843-10081.891ENSAOCG00000005395puf60b10078.794Amphiprion_ocellaris
ENSTRUG00000008843-10079.678ENSAPEG00000011923puf60b9779.276Amphiprion_percula
ENSTRUG00000008843-10082.341ENSAPEG00000001836-9981.690Amphiprion_percula
ENSTRUG00000008843-10087.771ENSATEG00000006303-9886.588Anabas_testudineus
ENSTRUG00000008843-10078.988ENSATEG00000001730puf60b9879.377Anabas_testudineus
ENSTRUG00000008843-10078.101ENSAPLG00000010150PUF609978.101Anas_platyrhynchos
ENSTRUG00000008843-10077.457ENSACAG00000001645PUF609677.842Anolis_carolinensis
ENSTRUG00000008843-10080.361ENSANAG00000018626PUF6010077.713Aotus_nancymaae
ENSTRUG00000008843-10081.288ENSACLG00000004462puf60b10081.690Astatotilapia_calliptera
ENSTRUG00000008843-10073.973ENSAMXG00000041030puf60b10074.560Astyanax_mexicanus
ENSTRUG00000008843-10083.936ENSAMXG00000036570puf60a9784.137Astyanax_mexicanus
ENSTRUG00000008843-10080.160ENSBTAG00000037493PUF609877.519Bos_taurus
ENSTRUG00000008843-8053.160WBGene00004389rnp-68353.004Caenorhabditis_elegans
ENSTRUG00000008843-10080.160ENSCJAG00000021485PUF609777.519Callithrix_jacchus
ENSTRUG00000008843-10080.361ENSCAFG00000001400PUF609279.960Canis_familiaris
ENSTRUG00000008843-10080.361ENSCAFG00020018754PUF609777.713Canis_lupus_dingo
ENSTRUG00000008843-10077.519ENSCHIG00000001618PUF608677.519Capra_hircus
ENSTRUG00000008843-10078.782ENSTSYG00000011912PUF6010077.713Carlito_syrichta
ENSTRUG00000008843-10075.547ENSCPOG00000014613PUF609375.149Cavia_porcellus
ENSTRUG00000008843-10079.563ENSCCAG00000007744PUF609777.907Cebus_capucinus
ENSTRUG00000008843-10080.160ENSCATG00000035405PUF609777.519Cercocebus_atys
ENSTRUG00000008843-10080.361ENSCLAG00000009154PUF609179.960Chinchilla_lanigera
ENSTRUG00000008843-10077.519ENSCSAG00000008878PUF6010077.519Chlorocebus_sabaeus
ENSTRUG00000008843-10077.519ENSCPBG00000005595PUF609777.519Chrysemys_picta_bellii
ENSTRUG00000008843-6458.537ENSCING00000002156-8859.077Ciona_intestinalis
ENSTRUG00000008843-9849.004ENSCING00000008436-9547.581Ciona_intestinalis
ENSTRUG00000008843-9749.364ENSCSAVG00000004765-9750.526Ciona_savignyi
ENSTRUG00000008843-9752.124ENSCSAVG00000001385-9953.593Ciona_savignyi
ENSTRUG00000008843-7979.750ENSCANG00000041843PUF6010076.499Colobus_angolensis_palliatus
ENSTRUG00000008843-10080.561ENSCGRG00001017442Puf609180.160Cricetulus_griseus_chok1gshd
ENSTRUG00000008843-10077.907ENSCGRG00000003717Puf609277.907Cricetulus_griseus_crigri
ENSTRUG00000008843-10084.008ENSCSEG00000014845-8985.223Cynoglossus_semilaevis
ENSTRUG00000008843-10078.599ENSCSEG00000019887puf60b9178.599Cynoglossus_semilaevis
ENSTRUG00000008843-10080.684ENSCVAG00000009386puf60b10081.288Cyprinodon_variegatus
ENSTRUG00000008843-8989.171ENSCVAG00000001560-9189.510Cyprinodon_variegatus
ENSTRUG00000008843-10074.606ENSDARG00000001241puf60b9986.345Danio_rerio
ENSTRUG00000008843-10078.654ENSDARG00000032175puf60a9981.034Danio_rerio
ENSTRUG00000008843-9864.694ENSDNOG00000043278PUF607671.167Dasypus_novemcinctus
ENSTRUG00000008843-10080.361ENSDORG00000004585Puf609379.960Dipodomys_ordii
ENSTRUG00000008843-8664.835FBgn0028577hfp9948.991Drosophila_melanogaster
ENSTRUG00000008843-10062.367ENSEBUG00000014291puf60b8463.958Eptatretus_burgeri
ENSTRUG00000008843-9771.064ENSEBUG00000005470-8871.064Eptatretus_burgeri
ENSTRUG00000008843-10080.361ENSEASG00005009695PUF609777.713Equus_asinus_asinus
ENSTRUG00000008843-10080.361ENSECAG00000024681PUF609677.713Equus_caballus
ENSTRUG00000008843-10076.879ENSELUG00000006507puf60b9876.091Esox_lucius
ENSTRUG00000008843-10083.968ENSELUG00000018443-9984.369Esox_lucius
ENSTRUG00000008843-10080.361ENSFCAG00000001045PUF6010077.713Felis_catus
ENSTRUG00000008843-10068.605ENSFALG00000001136PUF609768.992Ficedula_albicollis
ENSTRUG00000008843-10080.561ENSFDAG00000017177PUF609180.160Fukomys_damarensis
ENSTRUG00000008843-10081.087ENSFHEG00000020046puf60b10081.690Fundulus_heteroclitus
ENSTRUG00000008843-9583.745ENSFHEG00000021687PUF6010085.115Fundulus_heteroclitus
ENSTRUG00000008843-10067.066ENSGMOG00000006392puf60b9967.265Gadus_morhua
ENSTRUG00000008843-6680.233ENSGALG00000039901PUF609480.233Gallus_gallus
ENSTRUG00000008843-10087.190ENSGAFG00000004334-9987.190Gambusia_affinis
ENSTRUG00000008843-10078.405ENSGAFG00000021040puf60b10078.988Gambusia_affinis
ENSTRUG00000008843-10075.855ENSGACG00000001484-10074.447Gasterosteus_aculeatus
ENSTRUG00000008843-10067.510ENSGACG00000004717puf60b9767.510Gasterosteus_aculeatus
ENSTRUG00000008843-10080.361ENSGAGG00000013289PUF609179.760Gopherus_agassizii
ENSTRUG00000008843-10080.160ENSGGOG00000004646PUF609777.519Gorilla_gorilla
ENSTRUG00000008843-10081.288ENSHBUG00000015118puf60b10081.690Haplochromis_burtoni
ENSTRUG00000008843-10088.821ENSHBUG00000009634-10089.431Haplochromis_burtoni
ENSTRUG00000008843-10080.561ENSHGLG00000006111PUF609180.160Heterocephalus_glaber_female
ENSTRUG00000008843-10080.561ENSHGLG00100012362PUF609180.160Heterocephalus_glaber_male
ENSTRUG00000008843-10078.101ENSHCOG00000015541puf60b9978.682Hippocampus_comes
ENSTRUG00000008843-9872.154ENSHCOG00000000378-9970.646Hippocampus_comes
ENSTRUG00000008843-10075.195ENSIPUG00000004660puf60b9974.805Ictalurus_punctatus
ENSTRUG00000008843-10081.653ENSIPUG00000002453puf60a9979.038Ictalurus_punctatus
ENSTRUG00000008843-10077.713ENSSTOG00000025037PUF609277.713Ictidomys_tridecemlineatus
ENSTRUG00000008843-10080.561ENSJJAG00000001076Puf609280.160Jaculus_jaculus
ENSTRUG00000008843-10078.405ENSKMAG00000016745puf60b10078.794Kryptolebias_marmoratus
ENSTRUG00000008843-10080.268ENSKMAG00000010106-10080.460Kryptolebias_marmoratus
ENSTRUG00000008843-10077.922ENSLBEG00000012505puf60b10077.922Labrus_bergylta
ENSTRUG00000008843-7277.624ENSLACG00000005456PUF609877.031Latimeria_chalumnae
ENSTRUG00000008843-10081.287ENSLOCG00000010106puf60b9882.261Lepisosteus_oculatus
ENSTRUG00000008843-10076.550ENSLAFG00000022929PUF609376.550Loxodonta_africana
ENSTRUG00000008843-10080.160ENSMFAG00000043373PUF609877.519Macaca_fascicularis
ENSTRUG00000008843-10080.160ENSMMUG00000013558PUF609777.519Macaca_mulatta
ENSTRUG00000008843-10080.160ENSMNEG00000031099PUF609777.519Macaca_nemestrina
ENSTRUG00000008843-10080.160ENSMLEG00000040009PUF6010079.760Mandrillus_leucophaeus
ENSTRUG00000008843-10089.194ENSMAMG00000019476-9888.016Mastacembelus_armatus
ENSTRUG00000008843-10078.669ENSMAMG00000010394puf60b9878.474Mastacembelus_armatus
ENSTRUG00000008843-10085.658ENSMZEG00005019425-9886.248Maylandia_zebra
ENSTRUG00000008843-10081.288ENSMZEG00005018515puf60b10081.690Maylandia_zebra
ENSTRUG00000008843-10078.101ENSMGAG00000013070PUF609580.580Meleagris_gallopavo
ENSTRUG00000008843-6883.965ENSMAUG00000014267-8883.382Mesocricetus_auratus
ENSTRUG00000008843-9565.975ENSMAUG00000018549-9565.145Mesocricetus_auratus
ENSTRUG00000008843-10077.713ENSMICG00000012226PUF609877.713Microcebus_murinus
ENSTRUG00000008843-10080.561ENSMOCG00000018780Puf609180.160Microtus_ochrogaster
ENSTRUG00000008843-10079.377ENSMMOG00000004217puf60b10079.377Mola_mola
ENSTRUG00000008843-10084.375ENSMMOG00000018059-9986.288Mola_mola
ENSTRUG00000008843-10080.361ENSMODG00000009161PUF609379.960Monodelphis_domestica
ENSTRUG00000008843-10072.320ENSMALG00000006797puf60b9772.374Monopterus_albus
ENSTRUG00000008843-10087.426ENSMALG00000000200-9886.051Monopterus_albus
ENSTRUG00000008843-10080.762MGP_CAROLIEiJ_G0019910Puf609180.361Mus_caroli
ENSTRUG00000008843-10080.762ENSMUSG00000002524Puf609180.361Mus_musculus
ENSTRUG00000008843-10080.762MGP_PahariEiJ_G0019920Puf609180.361Mus_pahari
ENSTRUG00000008843-10080.762MGP_SPRETEiJ_G0020812Puf609180.361Mus_spretus
ENSTRUG00000008843-10077.519ENSMPUG00000008137PUF609177.519Mustela_putorius_furo
ENSTRUG00000008843-10077.756ENSMLUG00000013032-9777.355Myotis_lucifugus
ENSTRUG00000008843-10077.132ENSMLUG00000000238-9277.132Myotis_lucifugus
ENSTRUG00000008843-10080.561ENSNGAG00000000712Puf6010077.907Nannospalax_galili
ENSTRUG00000008843-10086.024ENSNBRG00000017223-9886.614Neolamprologus_brichardi
ENSTRUG00000008843-8275.286ENSNBRG00000013047puf60b9777.273Neolamprologus_brichardi
ENSTRUG00000008843-10080.160ENSNLEG00000002156PUF609779.760Nomascus_leucogenys
ENSTRUG00000008843-7383.696ENSOPRG00000002147PUF607583.959Ochotona_princeps
ENSTRUG00000008843-9756.607ENSODEG00000015513-9558.835Octodon_degus
ENSTRUG00000008843-7285.139ENSODEG00000014024-8984.375Octodon_degus
ENSTRUG00000008843-10085.855ENSONIG00000014030-9786.444Oreochromis_niloticus
ENSTRUG00000008843-10078.599ENSONIG00000006247puf60b9778.988Oreochromis_niloticus
ENSTRUG00000008843-9762.777ENSOANG00000006962PUF609763.380Ornithorhynchus_anatinus
ENSTRUG00000008843-9983.164ENSORLG00000028655-9983.852Oryzias_latipes
ENSTRUG00000008843-10080.282ENSORLG00000012279puf60b10078.599Oryzias_latipes
ENSTRUG00000008843-10077.626ENSORLG00020007333puf6010078.599Oryzias_latipes_hni
ENSTRUG00000008843-9983.529ENSORLG00020018144-9783.922Oryzias_latipes_hni
ENSTRUG00000008843-10078.295ENSORLG00015007718puf60b10078.488Oryzias_latipes_hsok
ENSTRUG00000008843-9983.529ENSORLG00015016833-9588.837Oryzias_latipes_hsok
ENSTRUG00000008843-9987.398ENSOMEG00000022185-9587.602Oryzias_melastigma
ENSTRUG00000008843-10079.352ENSOMEG00000001643puf60b10079.555Oryzias_melastigma
ENSTRUG00000008843-10077.713ENSOGAG00000006259PUF609277.713Otolemur_garnettii
ENSTRUG00000008843-10076.621ENSOARG00000016235PUF609776.621Ovis_aries
ENSTRUG00000008843-10080.160ENSPPAG00000029933PUF609777.519Pan_paniscus
ENSTRUG00000008843-10080.361ENSPPRG00000003257PUF6010079.960Panthera_pardus
ENSTRUG00000008843-10080.160ENSPTIG00000009795PUF609877.734Panthera_tigris_altaica
ENSTRUG00000008843-10080.160ENSPTRG00000043963-9777.519Pan_troglodytes
ENSTRUG00000008843-10080.160ENSPTRG00000020670PUF609777.519Pan_troglodytes
ENSTRUG00000008843-10080.160ENSPANG00000021936PUF609777.519Papio_anubis
ENSTRUG00000008843-10082.661ENSPKIG00000012204puf60b9883.669Paramormyrops_kingsleyae
ENSTRUG00000008843-10083.600ENSPKIG00000004295puf60a9982.687Paramormyrops_kingsleyae
ENSTRUG00000008843-10077.519ENSPSIG00000004679PUF609877.907Pelodiscus_sinensis
ENSTRUG00000008843-10077.400ENSPMGG00000013444puf60b9977.800Periophthalmus_magnuspinnatus
ENSTRUG00000008843-10080.561ENSPEMG00000008820Puf609180.160Peromyscus_maniculatus_bairdii
ENSTRUG00000008843-10080.361ENSPCIG00000020270PUF609877.713Phascolarctos_cinereus
ENSTRUG00000008843-10081.087ENSPFOG00000019217puf60b9881.690Poecilia_formosa
ENSTRUG00000008843-10085.743ENSPFOG00000011118-9785.743Poecilia_formosa
ENSTRUG00000008843-10081.087ENSPLAG00000010754puf60b10081.690Poecilia_latipinna
ENSTRUG00000008843-10085.545ENSPLAG00000017025-9085.545Poecilia_latipinna
ENSTRUG00000008843-10086.139ENSPMEG00000009767-9086.139Poecilia_mexicana
ENSTRUG00000008843-10081.087ENSPMEG00000000838puf60b10081.690Poecilia_mexicana
ENSTRUG00000008843-10079.477ENSPREG00000005440puf60b10080.080Poecilia_reticulata
ENSTRUG00000008843-7975.240ENSPPYG00000018951-9574.760Pongo_abelii
ENSTRUG00000008843-7976.499ENSPCAG00000014837PUF6010076.499Procavia_capensis
ENSTRUG00000008843-10080.160ENSPCOG00000027981PUF609877.519Propithecus_coquereli
ENSTRUG00000008843-10078.481ENSPVAG00000016167PUF608178.481Pteropus_vampyrus
ENSTRUG00000008843-10085.658ENSPNYG00000004273-9886.248Pundamilia_nyererei
ENSTRUG00000008843-10078.599ENSPNYG00000002556puf60b10078.988Pundamilia_nyererei
ENSTRUG00000008843-10077.172ENSPNAG00000019415puf60b8977.172Pygocentrus_nattereri
ENSTRUG00000008843-10083.534ENSPNAG00000019909puf60a9983.735Pygocentrus_nattereri
ENSTRUG00000008843-10080.762ENSRNOG00000009960Puf609180.361Rattus_norvegicus
ENSTRUG00000008843-10080.160ENSRBIG00000035274PUF609777.519Rhinopithecus_bieti
ENSTRUG00000008843-10080.160ENSRROG00000029360PUF609877.519Rhinopithecus_roxellana
ENSTRUG00000008843-10078.758ENSSBOG00000027089PUF609678.357Saimiri_boliviensis_boliviensis
ENSTRUG00000008843-8877.826ENSSHAG00000006668PUF608877.826Sarcophilus_harrisii
ENSTRUG00000008843-10077.222ENSSFOG00015019371puf60a9881.874Scleropages_formosus
ENSTRUG00000008843-10077.291ENSSFOG00015019619puf60b9978.395Scleropages_formosus
ENSTRUG00000008843-7483.838ENSSMAG00000016381puf60b7583.838Scophthalmus_maximus
ENSTRUG00000008843-10079.555ENSSDUG00000009935puf60b10079.960Seriola_dumerili
ENSTRUG00000008843-9687.018ENSSDUG00000007048-9586.613Seriola_dumerili
ENSTRUG00000008843-10086.497ENSSLDG00000007366-9988.063Seriola_lalandi_dorsalis
ENSTRUG00000008843-10078.988ENSSLDG00000024011puf60b9879.648Seriola_lalandi_dorsalis
ENSTRUG00000008843-6573.636ENSSPUG00000013518PUF609273.030Sphenodon_punctatus
ENSTRUG00000008843-10079.452ENSSPAG00000012144puf60b9880.039Stegastes_partitus
ENSTRUG00000008843-10087.255ENSSPAG00000020285-10087.255Stegastes_partitus
ENSTRUG00000008843-10080.160ENSSSCG00000038800PUF609779.760Sus_scrofa
ENSTRUG00000008843-10076.758ENSTGUG00000012797-9976.953Taeniopygia_guttata
ENSTRUG00000008843-10088.224ENSTNIG00000003069-9988.423Tetraodon_nigroviridis
ENSTRUG00000008843-10078.794ENSTNIG00000013675puf60b9979.183Tetraodon_nigroviridis
ENSTRUG00000008843-8065.217ENSTBEG00000001899-10066.667Tupaia_belangeri
ENSTRUG00000008843-5982.993ENSTBEG00000002751-9782.699Tupaia_belangeri
ENSTRUG00000008843-10076.311ENSTTRG00000017088PUF6010076.938Tursiops_truncatus
ENSTRUG00000008843-10080.361ENSUAMG00000024917PUF609777.713Ursus_americanus
ENSTRUG00000008843-10073.062ENSUMAG00000000272PUF609272.868Ursus_maritimus
ENSTRUG00000008843-10080.361ENSVVUG00000022527PUF6010077.713Vulpes_vulpes
ENSTRUG00000008843-10078.758ENSXETG00000012469puf609878.557Xenopus_tropicalis
ENSTRUG00000008843-10081.087ENSXCOG00000012355puf60b10081.690Xiphophorus_couchianus
ENSTRUG00000008843-10081.087ENSXMAG00000001862puf60b10078.988Xiphophorus_maculatus
ENSTRUG00000008843-10088.843ENSXMAG00000010507-9888.843Xiphophorus_maculatus

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