EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000008950 (Gene tree)
Gene ID: 101071675
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 9891 bases
Position: chr13:5098185-5108075
Accession: 101071675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000022497	zf-C2H2	PF00096.26	1.4e-33	1	7
ENSTRUP00000022497	zf-C2H2	PF00096.26	1.4e-33	2	7
ENSTRUP00000022497	zf-C2H2	PF00096.26	1.4e-33	3	7
ENSTRUP00000022497	zf-C2H2	PF00096.26	1.4e-33	4	7
ENSTRUP00000022497	zf-C2H2	PF00096.26	1.4e-33	5	7
ENSTRUP00000022497	zf-C2H2	PF00096.26	1.4e-33	6	7
ENSTRUP00000022497	zf-C2H2	PF00096.26	1.4e-33	7	7
ENSTRUP00000022498	zf-C2H2	PF00096.26	3.4e-30	1	6
ENSTRUP00000022498	zf-C2H2	PF00096.26	3.4e-30	2	6
ENSTRUP00000022498	zf-C2H2	PF00096.26	3.4e-30	3	6
ENSTRUP00000022498	zf-C2H2	PF00096.26	3.4e-30	4	6
ENSTRUP00000022498	zf-C2H2	PF00096.26	3.4e-30	5	6
ENSTRUP00000022498	zf-C2H2	PF00096.26	3.4e-30	6	6
ENSTRUP00000022497	zf-met	PF12874.7	2.1e-25	1	5
ENSTRUP00000022497	zf-met	PF12874.7	2.1e-25	2	5
ENSTRUP00000022497	zf-met	PF12874.7	2.1e-25	3	5
ENSTRUP00000022497	zf-met	PF12874.7	2.1e-25	4	5
ENSTRUP00000022497	zf-met	PF12874.7	2.1e-25	5	5
ENSTRUP00000022498	zf-met	PF12874.7	1.4e-23	1	5
ENSTRUP00000022498	zf-met	PF12874.7	1.4e-23	2	5
ENSTRUP00000022498	zf-met	PF12874.7	1.4e-23	3	5
ENSTRUP00000022498	zf-met	PF12874.7	1.4e-23	4	5
ENSTRUP00000022498	zf-met	PF12874.7	1.4e-23	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000022592	-	5175	-	ENSTRUP00000022498	1256 (aa)	-	H2TCV6
ENSTRUT00000022591	-	4381	XM_011609704	ENSTRUP00000022497	1190 (aa)	XP_011608006	H2TCV5

Gene Model

Click here to download ENSTRUG00000008950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000008950's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000008950	sall1a	68	61.538	ENSTRUG00000017423	sall3a	84	61.538
ENSTRUG00000008950	sall1a	61	33.708	ENSTRUG00000012157	-	83	33.708
ENSTRUG00000008950	sall1a	95	76.250	ENSTRUG00000007410	sall4	80	76.250
ENSTRUG00000008950	sall1a	61	52.830	ENSTRUG00000015687	-	93	50.000
ENSTRUG00000008950	sall1a	53	52.830	ENSTRUG00000017456	znf236	72	53.061
ENSTRUG00000008950	sall1a	84	65.217	ENSTRUG00000003369	sall3b	99	65.957

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000008950	sall1a	100	66.748	ENSG00000103449	SALL1	97	67.020	Homo_sapiens
ENSTRUG00000008950	sall1a	100	88.033	ENSAPOG00000022764	sall1a	91	88.033	Acanthochromis_polyacanthus
ENSTRUG00000008950	sall1a	100	64.614	ENSAMEG00000006817	SALL1	91	65.008	Ailuropoda_melanoleuca
ENSTRUG00000008950	sall1a	100	87.259	ENSACIG00000004231	sall1a	91	87.259	Amphilophus_citrinellus
ENSTRUG00000008950	sall1a	100	88.201	ENSAOCG00000002800	sall1a	91	88.201	Amphiprion_ocellaris
ENSTRUG00000008950	sall1a	100	88.033	ENSAPEG00000010179	sall1a	91	88.033	Amphiprion_percula
ENSTRUG00000008950	sall1a	100	88.285	ENSATEG00000003006	sall1a	91	88.285	Anabas_testudineus
ENSTRUG00000008950	sall1a	100	67.570	ENSAPLG00000003356	SALL1	91	66.996	Anas_platyrhynchos
ENSTRUG00000008950	sall1a	99	65.343	ENSACAG00000014399	SALL1	88	65.178	Anolis_carolinensis
ENSTRUG00000008950	sall1a	100	66.748	ENSANAG00000027238	SALL1	91	66.776	Aotus_nancymaae
ENSTRUG00000008950	sall1a	100	87.678	ENSACLG00000017148	sall1a	91	87.678	Astatotilapia_calliptera
ENSTRUG00000008950	sall1a	93	61.538	ENSAMXG00000017702	sall1b	60	61.538	Astyanax_mexicanus
ENSTRUG00000008950	sall1a	100	77.462	ENSAMXG00000018599	sall1a	91	77.880	Astyanax_mexicanus
ENSTRUG00000008950	sall1a	100	65.391	ENSBTAG00000008544	SALL1	91	65.472	Bos_taurus
ENSTRUG00000008950	sall1a	100	66.830	ENSCJAG00000001740	SALL1	91	66.912	Callithrix_jacchus
ENSTRUG00000008950	sall1a	100	65.576	ENSCAFG00000009755	SALL1	91	65.372	Canis_familiaris
ENSTRUG00000008950	sall1a	100	65.576	ENSCAFG00020002842	SALL1	91	65.372	Canis_lupus_dingo
ENSTRUG00000008950	sall1a	100	65.985	ENSCHIG00000026074	SALL1	91	66.175	Capra_hircus
ENSTRUG00000008950	sall1a	100	67.075	ENSTSYG00000029464	SALL1	91	66.912	Carlito_syrichta
ENSTRUG00000008950	sall1a	98	66.112	ENSCPOG00000006564	SALL1	91	65.750	Cavia_porcellus
ENSTRUG00000008950	sall1a	100	66.721	ENSCCAG00000001639	SALL1	92	67.104	Cebus_capucinus
ENSTRUG00000008950	sall1a	100	66.830	ENSCATG00000004982	SALL1	91	67.048	Cercocebus_atys
ENSTRUG00000008950	sall1a	100	66.234	ENSCLAG00000006380	SALL1	91	65.828	Chinchilla_lanigera
ENSTRUG00000008950	sall1a	100	66.013	ENSCSAG00000005319	SALL1	91	66.257	Chlorocebus_sabaeus
ENSTRUG00000008950	sall1a	69	65.462	ENSCHOG00000000800	-	69	65.957	Choloepus_hoffmanni
ENSTRUG00000008950	sall1a	100	67.077	ENSCPBG00000015924	SALL1	95	66.047	Chrysemys_picta_bellii
ENSTRUG00000008950	sall1a	100	66.639	ENSCANG00000036664	SALL1	91	67.291	Colobus_angolensis_palliatus
ENSTRUG00000008950	sall1a	100	65.824	ENSCGRG00001023314	-	91	65.766	Cricetulus_griseus_chok1gshd
ENSTRUG00000008950	sall1a	98	65.750	ENSCGRG00000009496	Sall1	91	65.690	Cricetulus_griseus_crigri
ENSTRUG00000008950	sall1a	100	85.822	ENSCSEG00000009349	sall1a	91	85.822	Cynoglossus_semilaevis
ENSTRUG00000008950	sall1a	98	85.309	ENSCVAG00000020513	sall1a	99	85.395	Cyprinodon_variegatus
ENSTRUG00000008950	sall1a	100	76.872	ENSDARG00000074319	sall1a	91	76.539	Danio_rerio
ENSTRUG00000008950	sall1a	93	63.462	ENSDARG00000075891	sall1b	62	63.462	Danio_rerio
ENSTRUG00000008950	sall1a	100	67.074	ENSDNOG00000016413	SALL1	91	66.967	Dasypus_novemcinctus
ENSTRUG00000008950	sall1a	98	66.080	ENSETEG00000015150	SALL1	91	65.721	Echinops_telfairi
ENSTRUG00000008950	sall1a	98	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSTRUG00000008950	sall1a	100	66.257	ENSEASG00005014602	SALL1	91	66.475	Equus_asinus_asinus
ENSTRUG00000008950	sall1a	99	64.793	ENSECAG00000011334	SALL1	99	65.741	Equus_caballus
ENSTRUG00000008950	sall1a	98	66.499	ENSEEUG00000002014	SALL1	91	66.471	Erinaceus_europaeus
ENSTRUG00000008950	sall1a	100	75.137	ENSELUG00000006159	sall1a	92	74.902	Esox_lucius
ENSTRUG00000008950	sall1a	100	53.765	ENSELUG00000017774	-	90	59.615	Esox_lucius
ENSTRUG00000008950	sall1a	100	65.196	ENSFCAG00000024654	SALL1	91	64.825	Felis_catus
ENSTRUG00000008950	sall1a	100	67.737	ENSFALG00000000074	SALL1	91	66.886	Ficedula_albicollis
ENSTRUG00000008950	sall1a	64	80.000	ENSFHEG00000008424	-	59	80.000	Fundulus_heteroclitus
ENSTRUG00000008950	sall1a	100	86.192	ENSFHEG00000012579	sall1a	91	86.192	Fundulus_heteroclitus
ENSTRUG00000008950	sall1a	89	61.538	ENSGMOG00000013383	-	90	61.538	Gadus_morhua
ENSTRUG00000008950	sall1a	100	80.833	ENSGMOG00000006103	sall1a	91	80.833	Gadus_morhua
ENSTRUG00000008950	sall1a	100	67.901	ENSGALG00000039238	SALL1	91	67.133	Gallus_gallus
ENSTRUG00000008950	sall1a	100	86.527	ENSGAFG00000009964	sall1a	91	86.527	Gambusia_affinis
ENSTRUG00000008950	sall1a	100	86.276	ENSGACG00000016702	sall1a	91	86.276	Gasterosteus_aculeatus
ENSTRUG00000008950	sall1a	100	67.105	ENSGAGG00000013979	SALL1	91	66.694	Gopherus_agassizii
ENSTRUG00000008950	sall1a	100	66.803	ENSGGOG00000000663	SALL1	91	66.993	Gorilla_gorilla
ENSTRUG00000008950	sall1a	100	87.762	ENSHBUG00000022005	sall1a	91	87.762	Haplochromis_burtoni
ENSTRUG00000008950	sall1a	100	66.639	ENSHGLG00000004288	-	91	66.341	Heterocephalus_glaber_female
ENSTRUG00000008950	sall1a	100	66.639	ENSHGLG00100017496	SALL1	91	66.341	Heterocephalus_glaber_male
ENSTRUG00000008950	sall1a	100	81.743	ENSHCOG00000000974	sall1a	91	81.577	Hippocampus_comes
ENSTRUG00000008950	sall1a	93	60.345	ENSIPUG00000022928	sall1b	90	60.345	Ictalurus_punctatus
ENSTRUG00000008950	sall1a	100	77.398	ENSIPUG00000016265	SALL1	91	77.398	Ictalurus_punctatus
ENSTRUG00000008950	sall1a	100	65.777	ENSSTOG00000020885	SALL1	91	65.860	Ictidomys_tridecemlineatus
ENSTRUG00000008950	sall1a	100	86.946	ENSKMAG00000016681	sall1a	91	86.946	Kryptolebias_marmoratus
ENSTRUG00000008950	sall1a	97	86.328	ENSLBEG00000012207	sall1a	87	86.328	Labrus_bergylta
ENSTRUG00000008950	sall1a	90	61.538	ENSLACG00000014018	-	63	61.538	Latimeria_chalumnae
ENSTRUG00000008950	sall1a	100	67.354	ENSLACG00000003556	SALL1	91	67.519	Latimeria_chalumnae
ENSTRUG00000008950	sall1a	100	74.979	ENSLOCG00000007283	sall1b	92	75.103	Lepisosteus_oculatus
ENSTRUG00000008950	sall1a	98	66.388	ENSLAFG00000015251	SALL1	91	66.276	Loxodonta_africana
ENSTRUG00000008950	sall1a	100	66.721	ENSMFAG00000003298	SALL1	91	66.885	Macaca_fascicularis
ENSTRUG00000008950	sall1a	92	66.696	ENSMMUG00000017200	SALL1	91	66.874	Macaca_mulatta
ENSTRUG00000008950	sall1a	92	66.903	ENSMNEG00000034770	SALL1	91	67.020	Macaca_nemestrina
ENSTRUG00000008950	sall1a	100	66.667	ENSMLEG00000036406	SALL1	91	67.229	Mandrillus_leucophaeus
ENSTRUG00000008950	sall1a	100	88.880	ENSMAMG00000004164	sall1a	91	88.880	Mastacembelus_armatus
ENSTRUG00000008950	sall1a	100	87.594	ENSMZEG00005006479	sall1a	91	87.594	Maylandia_zebra
ENSTRUG00000008950	sall1a	98	67.563	ENSMGAG00000004704	SALL1	91	66.779	Meleagris_gallopavo
ENSTRUG00000008950	sall1a	100	64.711	ENSMAUG00000019093	Sall1	93	63.510	Mesocricetus_auratus
ENSTRUG00000008950	sall1a	100	66.284	ENSMICG00000036486	SALL1	91	66.174	Microcebus_murinus
ENSTRUG00000008950	sall1a	100	90.604	ENSMMOG00000016400	sall1a	91	90.604	Mola_mola
ENSTRUG00000008950	sall1a	100	66.913	ENSMODG00000013114	SALL1	91	66.721	Monodelphis_domestica
ENSTRUG00000008950	sall1a	100	87.782	ENSMALG00000013400	sall1a	91	87.782	Monopterus_albus
ENSTRUG00000008950	sall1a	100	65.182	MGP_CAROLIEiJ_G0031362	Sall1	91	64.915	Mus_caroli
ENSTRUG00000008950	sall1a	100	64.806	ENSMUSG00000031665	Sall1	91	64.677	Mus_musculus
ENSTRUG00000008950	sall1a	100	64.668	MGP_PahariEiJ_G0022961	Sall1	91	64.663	Mus_pahari
ENSTRUG00000008950	sall1a	100	64.968	MGP_SPRETEiJ_G0032480	Sall1	91	64.758	Mus_spretus
ENSTRUG00000008950	sall1a	98	65.087	ENSMPUG00000003265	SALL1	88	65.083	Mustela_putorius_furo
ENSTRUG00000008950	sall1a	98	63.228	ENSMLUG00000015541	SALL1	91	63.817	Myotis_lucifugus
ENSTRUG00000008950	sall1a	100	87.846	ENSNBRG00000009307	sall1a	91	87.846	Neolamprologus_brichardi
ENSTRUG00000008950	sall1a	93	92.537	ENSNLEG00000001008	SALL1	91	92.537	Nomascus_leucogenys
ENSTRUG00000008950	sall1a	100	66.859	ENSMEUG00000012206	SALL1	91	66.694	Notamacropus_eugenii
ENSTRUG00000008950	sall1a	84	71.327	ENSOPRG00000005645	SALL1	62	71.277	Ochotona_princeps
ENSTRUG00000008950	sall1a	100	66.639	ENSODEG00000003685	SALL1	91	66.041	Octodon_degus
ENSTRUG00000008950	sall1a	100	87.678	ENSONIG00000002831	sall1a	99	87.296	Oreochromis_niloticus
ENSTRUG00000008950	sall1a	95	71.610	ENSOANG00000013399	SALL1	86	74.242	Ornithorhynchus_anatinus
ENSTRUG00000008950	sall1a	100	85.941	ENSORLG00000013827	sall1a	91	85.941	Oryzias_latipes
ENSTRUG00000008950	sall1a	100	86.109	ENSORLG00020020570	sall1a	91	86.109	Oryzias_latipes_hni
ENSTRUG00000008950	sall1a	100	86.025	ENSORLG00015018830	sall1a	91	86.025	Oryzias_latipes_hsok
ENSTRUG00000008950	sall1a	100	86.192	ENSOMEG00000016043	sall1a	91	86.192	Oryzias_melastigma
ENSTRUG00000008950	sall1a	100	67.186	ENSOGAG00000027316	SALL1	91	67.103	Otolemur_garnettii
ENSTRUG00000008950	sall1a	100	61.928	ENSOARG00000017583	SALL1	91	61.916	Ovis_aries
ENSTRUG00000008950	sall1a	100	48.768	ENSPPAG00000035136	-	91	49.139	Pan_paniscus
ENSTRUG00000008950	sall1a	98	66.861	ENSPPAG00000035657	SALL1	91	66.722	Pan_paniscus
ENSTRUG00000008950	sall1a	100	65.033	ENSPPRG00000023283	SALL1	91	64.663	Panthera_pardus
ENSTRUG00000008950	sall1a	90	83.429	ENSPTIG00000013539	-	96	70.321	Panthera_tigris_altaica
ENSTRUG00000008950	sall1a	99	49.218	ENSPTRG00000045256	-	92	49.671	Pan_troglodytes
ENSTRUG00000008950	sall1a	100	66.912	ENSPTRG00000008108	SALL1	91	66.857	Pan_troglodytes
ENSTRUG00000008950	sall1a	100	66.667	ENSPANG00000024176	SALL1	91	67.212	Papio_anubis
ENSTRUG00000008950	sall1a	100	69.868	ENSPKIG00000022251	sall1a	91	69.900	Paramormyrops_kingsleyae
ENSTRUG00000008950	sall1a	100	68.193	ENSPKIG00000005383	-	91	68.552	Paramormyrops_kingsleyae
ENSTRUG00000008950	sall1a	100	67.737	ENSPSIG00000008582	SALL1	91	67.379	Pelodiscus_sinensis
ENSTRUG00000008950	sall1a	100	80.099	ENSPMGG00000021788	sall1a	91	80.116	Periophthalmus_magnuspinnatus
ENSTRUG00000008950	sall1a	89	56.140	ENSPMAG00000008148	sall1b	87	53.846	Petromyzon_marinus
ENSTRUG00000008950	sall1a	100	66.859	ENSPCIG00000017840	SALL1	91	66.667	Phascolarctos_cinereus
ENSTRUG00000008950	sall1a	98	86.360	ENSPFOG00000015799	sall1a	87	86.360	Poecilia_formosa
ENSTRUG00000008950	sall1a	100	86.778	ENSPLAG00000022539	sall1a	91	86.778	Poecilia_latipinna
ENSTRUG00000008950	sall1a	100	86.946	ENSPMEG00000020894	sall1a	91	86.946	Poecilia_mexicana
ENSTRUG00000008950	sall1a	100	86.527	ENSPREG00000006802	sall1a	91	86.527	Poecilia_reticulata
ENSTRUG00000008950	sall1a	98	66.276	ENSPPYG00000007345	SALL1	95	66.444	Pongo_abelii
ENSTRUG00000008950	sall1a	92	67.901	ENSPCAG00000008162	SALL1	93	67.902	Procavia_capensis
ENSTRUG00000008950	sall1a	100	66.339	ENSPCOG00000028192	SALL1	91	66.394	Propithecus_coquereli
ENSTRUG00000008950	sall1a	71	68.302	ENSPVAG00000015374	SALL1	87	68.043	Pteropus_vampyrus
ENSTRUG00000008950	sall1a	100	87.762	ENSPNYG00000010865	sall1a	91	87.762	Pundamilia_nyererei
ENSTRUG00000008950	sall1a	93	61.538	ENSPNAG00000007442	sall1b	90	61.538	Pygocentrus_nattereri
ENSTRUG00000008950	sall1a	100	75.646	ENSPNAG00000023644	sall1a	91	76.063	Pygocentrus_nattereri
ENSTRUG00000008950	sall1a	99	65.306	ENSPNAG00000028248	-	61	65.306	Pygocentrus_nattereri
ENSTRUG00000008950	sall1a	100	65.356	ENSRNOG00000013907	Sall1	91	65.160	Rattus_norvegicus
ENSTRUG00000008950	sall1a	92	66.696	ENSRBIG00000015707	SALL1	91	67.054	Rhinopithecus_bieti
ENSTRUG00000008950	sall1a	97	67.115	ENSRROG00000035777	SALL1	91	67.112	Rhinopithecus_roxellana
ENSTRUG00000008950	sall1a	100	66.858	ENSSBOG00000032186	SALL1	91	66.776	Saimiri_boliviensis_boliviensis
ENSTRUG00000008950	sall1a	100	66.612	ENSSHAG00000009477	SALL1	91	66.365	Sarcophilus_harrisii
ENSTRUG00000008950	sall1a	98	69.517	ENSSFOG00015001590	sall1a	91	69.543	Scleropages_formosus
ENSTRUG00000008950	sall1a	100	70.273	ENSSFOG00015020020	sall1a	91	70.025	Scleropages_formosus
ENSTRUG00000008950	sall1a	100	88.452	ENSSMAG00000009160	sall1a	91	88.452	Scophthalmus_maximus
ENSTRUG00000008950	sall1a	98	59.184	ENSSDUG00000000748	sall1b	65	60.000	Seriola_dumerili
ENSTRUG00000008950	sall1a	100	89.372	ENSSDUG00000006507	sall1a	91	89.372	Seriola_dumerili
ENSTRUG00000008950	sall1a	100	89.372	ENSSLDG00000017721	sall1a	91	89.372	Seriola_lalandi_dorsalis
ENSTRUG00000008950	sall1a	63	73.810	ENSSLDG00000014465	-	80	86.765	Seriola_lalandi_dorsalis
ENSTRUG00000008950	sall1a	97	65.349	ENSSARG00000000661	SALL1	91	65.852	Sorex_araneus
ENSTRUG00000008950	sall1a	100	66.612	ENSSPUG00000000156	SALL1	91	66.694	Sphenodon_punctatus
ENSTRUG00000008950	sall1a	100	88.127	ENSSPAG00000021615	sall1a	91	88.127	Stegastes_partitus
ENSTRUG00000008950	sall1a	100	65.363	ENSSSCG00000002836	SALL1	97	64.824	Sus_scrofa
ENSTRUG00000008950	sall1a	100	67.325	ENSTGUG00000007514	SALL1	91	66.474	Taeniopygia_guttata
ENSTRUG00000008950	sall1a	100	93.115	ENSTNIG00000004257	sall1a	99	93.115	Tetraodon_nigroviridis
ENSTRUG00000008950	sall1a	98	65.236	ENSUAMG00000023379	-	92	65.572	Ursus_americanus
ENSTRUG00000008950	sall1a	98	64.908	ENSVVUG00000019383	-	99	65.025	Vulpes_vulpes
ENSTRUG00000008950	sall1a	87	61.538	ENSXETG00000017176	sall2	76	61.538	Xenopus_tropicalis
ENSTRUG00000008950	sall1a	100	62.960	ENSXETG00000018417	sall1	92	63.171	Xenopus_tropicalis
ENSTRUG00000008950	sall1a	100	86.611	ENSXMAG00000016273	sall1a	91	86.611	Xiphophorus_maculatus