EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000008953 (Gene tree)
Gene ID: 101071878
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 12032 bases
Position: chr5:11273728-11285759
Accession: 101071878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000022512	RRM_1	PF00076.22	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000022606	-	7845	XM_011604280	ENSTRUP00000022512	1826 (aa)	XP_011602582	H2TCX0

Gene Model

Click here to download ENSTRUG00000008953's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000008953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000008953	setd1a	58	66.340	ENSTRUG00000009533	setd1ba	50	66.340

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000008953	setd1a	77	94.030	ENSAPOG00000018002	setd1a	63	92.823	Acanthochromis_polyacanthus
ENSTRUG00000008953	setd1a	82	84.659	ENSACIG00000007144	setd1a	91	87.688	Amphilophus_citrinellus
ENSTRUG00000008953	setd1a	99	84.185	ENSAOCG00000003663	setd1a	83	82.566	Amphiprion_ocellaris
ENSTRUG00000008953	setd1a	92	86.596	ENSATEG00000022798	setd1a	77	86.596	Anabas_testudineus
ENSTRUG00000008953	setd1a	99	82.558	ENSACLG00000024747	setd1a	83	80.097	Astatotilapia_calliptera
ENSTRUG00000008953	setd1a	50	77.097	ENSCPBG00000010830	-	65	79.054	Chrysemys_picta_bellii
ENSTRUG00000008953	setd1a	92	83.191	ENSCSEG00000021605	setd1a	78	83.191	Cynoglossus_semilaevis
ENSTRUG00000008953	setd1a	92	82.128	ENSCVAG00000011672	setd1a	78	82.340	Cyprinodon_variegatus
ENSTRUG00000008953	setd1a	85	69.263	ENSELUG00000020261	setd1a	74	71.008	Esox_lucius
ENSTRUG00000008953	setd1a	99	71.358	ENSFHEG00000023258	setd1a	89	79.147	Fundulus_heteroclitus
ENSTRUG00000008953	setd1a	61	91.401	ENSGAFG00000011698	setd1a	81	91.401	Gambusia_affinis
ENSTRUG00000008953	setd1a	75	83.880	ENSGACG00000013688	setd1a	81	79.430	Gasterosteus_aculeatus
ENSTRUG00000008953	setd1a	60	64.120	ENSGAGG00000010781	-	75	64.120	Gopherus_agassizii
ENSTRUG00000008953	setd1a	99	82.724	ENSHBUG00000008893	setd1a	83	80.500	Haplochromis_burtoni
ENSTRUG00000008953	setd1a	50	80.859	ENSHGLG00100010551	-	80	80.859	Heterocephalus_glaber_male
ENSTRUG00000008953	setd1a	57	86.364	ENSHCOG00000003119	setd1a	66	87.069	Hippocampus_comes
ENSTRUG00000008953	setd1a	70	63.825	ENSIPUG00000007413	setd1a	58	60.613	Ictalurus_punctatus
ENSTRUG00000008953	setd1a	99	81.282	ENSKMAG00000009484	setd1a	77	84.222	Kryptolebias_marmoratus
ENSTRUG00000008953	setd1a	92	83.510	ENSLBEG00000004399	setd1a	77	84.355	Labrus_bergylta
ENSTRUG00000008953	setd1a	70	90.272	ENSMAMG00000021851	setd1a	81	90.272	Mastacembelus_armatus
ENSTRUG00000008953	setd1a	99	82.558	ENSMZEG00005023141	setd1a	83	81.275	Maylandia_zebra
ENSTRUG00000008953	setd1a	74	91.977	ENSMMOG00000016992	setd1a	90	92.754	Mola_mola
ENSTRUG00000008953	setd1a	97	76.723	ENSMALG00000007401	setd1a	82	76.737	Monopterus_albus
ENSTRUG00000008953	setd1a	99	77.221	ENSORLG00000002213	setd1a	78	81.702	Oryzias_latipes
ENSTRUG00000008953	setd1a	99	77.464	ENSORLG00020011897	setd1a	78	81.277	Oryzias_latipes_hni
ENSTRUG00000008953	setd1a	92	80.426	ENSORLG00015004826	setd1a	78	81.489	Oryzias_latipes_hsok
ENSTRUG00000008953	setd1a	99	77.563	ENSOMEG00000019732	setd1a	78	78.416	Oryzias_melastigma
ENSTRUG00000008953	setd1a	99	74.878	ENSPFOG00000013669	setd1a	58	74.697	Poecilia_formosa
ENSTRUG00000008953	setd1a	92	81.435	ENSPLAG00000009294	setd1a	78	81.702	Poecilia_latipinna
ENSTRUG00000008953	setd1a	92	81.435	ENSPMEG00000005864	setd1a	78	81.702	Poecilia_mexicana
ENSTRUG00000008953	setd1a	92	81.529	ENSPREG00000010201	setd1a	78	81.529	Poecilia_reticulata
ENSTRUG00000008953	setd1a	99	80.741	ENSPNYG00000014139	setd1a	78	86.596	Pundamilia_nyererei
ENSTRUG00000008953	setd1a	90	65.256	ENSSFOG00015007013	setd1a	79	65.567	Scleropages_formosus
ENSTRUG00000008953	setd1a	99	80.921	ENSSMAG00000008846	setd1a	79	84.632	Scophthalmus_maximus
ENSTRUG00000008953	setd1a	99	85.572	ENSSDUG00000022142	setd1a	83	83.775	Seriola_dumerili
ENSTRUG00000008953	setd1a	99	85.406	ENSSLDG00000018250	setd1a	83	83.609	Seriola_lalandi_dorsalis
ENSTRUG00000008953	setd1a	99	85.338	ENSSPAG00000007822	setd1a	83	83.388	Stegastes_partitus
ENSTRUG00000008953	setd1a	64	87.572	ENSTNIG00000014930	setd1a	86	89.333	Tetraodon_nigroviridis
ENSTRUG00000008953	setd1a	86	83.974	ENSXCOG00000017585	setd1a	78	79.149	Xiphophorus_couchianus