EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000008977 (Gene tree)
Gene ID: 101071894
Gene Symbol: snrpd1
Alias: CHUNP6882|fk26a01|wu:fk26a01|zgc:86929
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 1243 bases
Position: chr12:2511712-2512954
Accession: 101071894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000022569	LSM	PF01423.22	3.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000022663	-	339	XM_003968915	ENSTRUP00000022569	112 (aa)	XP_003968964	H2TD27

Gene Model

Click here to download ENSTRUG00000008977's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000008977's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000008977	snrpd1	84	31.633	ENSTRUG00000023976	snrpd3l	60	33.803
ENSTRUG00000008977	snrpd1	60	32.836	ENSTRUG00000010531	oscp1a	54	32.836

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000008977	snrpd1	100	96.429	ENSG00000167088	SNRPD1	94	96.429	Homo_sapiens
ENSTRUG00000008977	snrpd1	100	98.214	ENSAPOG00000019446	snrpd1	61	98.214	Acanthochromis_polyacanthus
ENSTRUG00000008977	snrpd1	100	96.429	ENSAMEG00000002576	SNRPD1	96	96.429	Ailuropoda_melanoleuca
ENSTRUG00000008977	snrpd1	100	98.214	ENSACIG00000011263	snrpd1	100	98.214	Amphilophus_citrinellus
ENSTRUG00000008977	snrpd1	100	98.214	ENSAOCG00000007406	snrpd1	94	98.214	Amphiprion_ocellaris
ENSTRUG00000008977	snrpd1	100	98.214	ENSAPEG00000012539	SNRPD1	100	98.214	Amphiprion_percula
ENSTRUG00000008977	snrpd1	100	93.750	ENSAPEG00000014961	snrpd1	94	93.750	Amphiprion_percula
ENSTRUG00000008977	snrpd1	100	98.214	ENSATEG00000014399	snrpd1	100	98.214	Anabas_testudineus
ENSTRUG00000008977	snrpd1	100	96.429	ENSAPLG00000012256	SNRPD1	94	96.429	Anas_platyrhynchos
ENSTRUG00000008977	snrpd1	100	96.429	ENSACAG00000006364	SNRPD1	94	96.429	Anolis_carolinensis
ENSTRUG00000008977	snrpd1	100	96.429	ENSANAG00000025641	SNRPD1	94	96.429	Aotus_nancymaae
ENSTRUG00000008977	snrpd1	100	98.214	ENSACLG00000017406	snrpd1	100	98.214	Astatotilapia_calliptera
ENSTRUG00000008977	snrpd1	100	99.107	ENSAMXG00000004589	snrpd1	94	99.107	Astyanax_mexicanus
ENSTRUG00000008977	snrpd1	79	92.135	ENSBTAG00000055316	-	77	92.135	Bos_taurus
ENSTRUG00000008977	snrpd1	94	93.333	ENSBTAG00000047266	-	88	93.333	Bos_taurus
ENSTRUG00000008977	snrpd1	100	96.429	ENSBTAG00000008292	SNRPD1	94	96.429	Bos_taurus
ENSTRUG00000008977	snrpd1	79	94.318	ENSBTAG00000012376	-	66	94.318	Bos_taurus
ENSTRUG00000008977	snrpd1	72	76.543	WBGene00004916	snr-3	71	71.910	Caenorhabditis_elegans
ENSTRUG00000008977	snrpd1	100	96.429	ENSCJAG00000042955	SNRPD1	94	96.429	Callithrix_jacchus
ENSTRUG00000008977	snrpd1	100	96.429	ENSCAFG00000018247	SNRPD1	94	96.429	Canis_familiaris
ENSTRUG00000008977	snrpd1	79	95.455	ENSCAFG00020015914	SNRPD1	69	95.455	Canis_lupus_dingo
ENSTRUG00000008977	snrpd1	100	96.429	ENSCHIG00000005557	SNRPD1	94	96.429	Capra_hircus
ENSTRUG00000008977	snrpd1	100	96.429	ENSTSYG00000030028	SNRPD1	94	96.429	Carlito_syrichta
ENSTRUG00000008977	snrpd1	100	96.429	ENSCAPG00000008103	SNRPD1	97	96.429	Cavia_aperea
ENSTRUG00000008977	snrpd1	100	96.429	ENSCPOG00000004679	SNRPD1	97	96.429	Cavia_porcellus
ENSTRUG00000008977	snrpd1	79	92.135	ENSCCAG00000005390	-	75	92.135	Cebus_capucinus
ENSTRUG00000008977	snrpd1	94	95.238	ENSCCAG00000020611	-	88	95.238	Cebus_capucinus
ENSTRUG00000008977	snrpd1	94	92.381	ENSCCAG00000016652	-	88	92.381	Cebus_capucinus
ENSTRUG00000008977	snrpd1	100	96.429	ENSCCAG00000032658	SNRPD1	94	96.429	Cebus_capucinus
ENSTRUG00000008977	snrpd1	100	96.429	ENSCATG00000039978	SNRPD1	94	96.429	Cercocebus_atys
ENSTRUG00000008977	snrpd1	100	96.429	ENSCLAG00000008691	SNRPD1	94	96.429	Chinchilla_lanigera
ENSTRUG00000008977	snrpd1	100	96.429	ENSCSAG00000017654	SNRPD1	94	96.429	Chlorocebus_sabaeus
ENSTRUG00000008977	snrpd1	100	96.429	ENSCPBG00000023143	SNRPD1	94	96.429	Chrysemys_picta_bellii
ENSTRUG00000008977	snrpd1	71	84.810	ENSCING00000024100	-	63	84.810	Ciona_intestinalis
ENSTRUG00000008977	snrpd1	71	85.000	ENSCSAVG00000004578	-	64	85.000	Ciona_savignyi
ENSTRUG00000008977	snrpd1	79	71.591	ENSCGRG00001009945	-	77	71.591	Cricetulus_griseus_chok1gshd
ENSTRUG00000008977	snrpd1	100	96.429	ENSCGRG00001021055	-	94	96.429	Cricetulus_griseus_chok1gshd
ENSTRUG00000008977	snrpd1	100	96.429	ENSCGRG00000000490	-	94	96.429	Cricetulus_griseus_crigri
ENSTRUG00000008977	snrpd1	79	71.591	ENSCGRG00000006224	-	77	71.591	Cricetulus_griseus_crigri
ENSTRUG00000008977	snrpd1	100	96.429	ENSCSEG00000018141	snrpd1	94	96.429	Cynoglossus_semilaevis
ENSTRUG00000008977	snrpd1	100	98.214	ENSCVAG00000000534	snrpd1	94	98.214	Cyprinodon_variegatus
ENSTRUG00000008977	snrpd1	100	99.107	ENSDARG00000011648	snrpd1	94	99.107	Danio_rerio
ENSTRUG00000008977	snrpd1	100	96.429	ENSDNOG00000040310	SNRPD1	94	96.429	Dasypus_novemcinctus
ENSTRUG00000008977	snrpd1	100	96.429	ENSDORG00000008349	Snrpd1	94	96.429	Dipodomys_ordii
ENSTRUG00000008977	snrpd1	78	79.310	FBgn0261933	SmD1	70	79.310	Drosophila_melanogaster
ENSTRUG00000008977	snrpd1	72	95.062	ENSETEG00000011689	SNRPD1	68	95.062	Echinops_telfairi
ENSTRUG00000008977	snrpd1	94	92.381	ENSEBUG00000003170	snrpd1	88	92.381	Eptatretus_burgeri
ENSTRUG00000008977	snrpd1	100	96.429	ENSEASG00005002433	SNRPD1	100	96.429	Equus_asinus_asinus
ENSTRUG00000008977	snrpd1	100	96.429	ENSECAG00000014373	SNRPD1	100	96.429	Equus_caballus
ENSTRUG00000008977	snrpd1	78	95.402	ENSEEUG00000004987	SNRPD1	98	95.402	Erinaceus_europaeus
ENSTRUG00000008977	snrpd1	93	86.538	ENSELUG00000000088	snrpd1	73	97.701	Esox_lucius
ENSTRUG00000008977	snrpd1	100	96.429	ENSFCAG00000012352	SNRPD1	94	96.429	Felis_catus
ENSTRUG00000008977	snrpd1	100	96.429	ENSFALG00000002646	SNRPD1	100	96.429	Ficedula_albicollis
ENSTRUG00000008977	snrpd1	100	99.107	ENSGMOG00000015607	snrpd1	94	99.107	Gadus_morhua
ENSTRUG00000008977	snrpd1	100	96.429	ENSGALG00000041334	SNRPD1	94	96.429	Gallus_gallus
ENSTRUG00000008977	snrpd1	100	98.214	ENSGAFG00000011171	snrpd1	94	98.214	Gambusia_affinis
ENSTRUG00000008977	snrpd1	100	99.107	ENSGACG00000005201	SNRPD1	94	99.107	Gasterosteus_aculeatus
ENSTRUG00000008977	snrpd1	100	96.429	ENSGAGG00000011197	SNRPD1	94	96.429	Gopherus_agassizii
ENSTRUG00000008977	snrpd1	100	96.429	ENSGGOG00000041053	SNRPD1	94	96.429	Gorilla_gorilla
ENSTRUG00000008977	snrpd1	79	89.888	ENSGGOG00000026706	-	74	89.888	Gorilla_gorilla
ENSTRUG00000008977	snrpd1	100	98.214	ENSHBUG00000003236	snrpd1	94	98.214	Haplochromis_burtoni
ENSTRUG00000008977	snrpd1	100	96.429	ENSHGLG00000007152	SNRPD1	94	96.429	Heterocephalus_glaber_female
ENSTRUG00000008977	snrpd1	100	96.429	ENSHGLG00100008618	SNRPD1	94	96.429	Heterocephalus_glaber_male
ENSTRUG00000008977	snrpd1	100	98.214	ENSIPUG00000003576	snrpd1	94	98.214	Ictalurus_punctatus
ENSTRUG00000008977	snrpd1	100	96.429	ENSSTOG00000000485	SNRPD1	95	96.429	Ictidomys_tridecemlineatus
ENSTRUG00000008977	snrpd1	100	96.429	ENSJJAG00000017698	Snrpd1	94	96.429	Jaculus_jaculus
ENSTRUG00000008977	snrpd1	100	98.214	ENSKMAG00000005987	snrpd1	94	98.214	Kryptolebias_marmoratus
ENSTRUG00000008977	snrpd1	100	98.214	ENSLBEG00000003327	snrpd1	94	98.214	Labrus_bergylta
ENSTRUG00000008977	snrpd1	100	96.429	ENSLACG00000001955	SNRPD1	94	96.429	Latimeria_chalumnae
ENSTRUG00000008977	snrpd1	100	96.429	ENSLOCG00000002003	snrpd1	96	96.429	Lepisosteus_oculatus
ENSTRUG00000008977	snrpd1	100	96.429	ENSLAFG00000005819	SNRPD1	95	96.429	Loxodonta_africana
ENSTRUG00000008977	snrpd1	100	96.429	ENSMFAG00000042080	SNRPD1	94	96.429	Macaca_fascicularis
ENSTRUG00000008977	snrpd1	100	96.429	ENSMMUG00000003992	SNRPD1	96	96.429	Macaca_mulatta
ENSTRUG00000008977	snrpd1	100	96.429	ENSMNEG00000041296	SNRPD1	94	96.429	Macaca_nemestrina
ENSTRUG00000008977	snrpd1	100	96.429	ENSMLEG00000028659	SNRPD1	94	96.429	Mandrillus_leucophaeus
ENSTRUG00000008977	snrpd1	100	98.214	ENSMAMG00000012971	snrpd1	94	98.214	Mastacembelus_armatus
ENSTRUG00000008977	snrpd1	100	98.214	ENSMZEG00005004685	snrpd1	94	98.214	Maylandia_zebra
ENSTRUG00000008977	snrpd1	100	96.429	ENSMGAG00000011598	SNRPD1	93	96.429	Meleagris_gallopavo
ENSTRUG00000008977	snrpd1	78	81.609	ENSMAUG00000016502	-	78	81.609	Mesocricetus_auratus
ENSTRUG00000008977	snrpd1	78	81.609	ENSMAUG00000016467	-	78	81.609	Mesocricetus_auratus
ENSTRUG00000008977	snrpd1	84	90.426	ENSMAUG00000006829	-	57	95.402	Mesocricetus_auratus
ENSTRUG00000008977	snrpd1	100	96.429	ENSMICG00000044066	SNRPD1	94	96.429	Microcebus_murinus
ENSTRUG00000008977	snrpd1	100	96.429	ENSMOCG00000017367	Snrpd1	94	96.429	Microtus_ochrogaster
ENSTRUG00000008977	snrpd1	100	98.214	ENSMMOG00000019089	snrpd1	94	98.214	Mola_mola
ENSTRUG00000008977	snrpd1	100	96.429	ENSMODG00000021487	SNRPD1	97	96.429	Monodelphis_domestica
ENSTRUG00000008977	snrpd1	100	98.214	ENSMALG00000014459	snrpd1	94	98.214	Monopterus_albus
ENSTRUG00000008977	snrpd1	100	96.429	MGP_CAROLIEiJ_G0021994	Snrpd1	94	96.429	Mus_caroli
ENSTRUG00000008977	snrpd1	100	96.429	ENSMUSG00000002477	Snrpd1	94	96.429	Mus_musculus
ENSTRUG00000008977	snrpd1	100	96.429	MGP_PahariEiJ_G0018731	Snrpd1	94	96.429	Mus_pahari
ENSTRUG00000008977	snrpd1	100	96.429	MGP_SPRETEiJ_G0022910	Snrpd1	94	96.429	Mus_spretus
ENSTRUG00000008977	snrpd1	100	96.429	ENSMPUG00000005567	-	96	96.429	Mustela_putorius_furo
ENSTRUG00000008977	snrpd1	94	95.238	ENSMPUG00000020041	-	88	95.238	Mustela_putorius_furo
ENSTRUG00000008977	snrpd1	97	96.330	ENSMLUG00000009124	SNRPD1	84	96.330	Myotis_lucifugus
ENSTRUG00000008977	snrpd1	100	96.429	ENSNGAG00000023946	Snrpd1	94	96.429	Nannospalax_galili
ENSTRUG00000008977	snrpd1	78	97.701	ENSNBRG00000012119	snrpd1	72	97.701	Neolamprologus_brichardi
ENSTRUG00000008977	snrpd1	100	93.750	ENSNLEG00000031430	SNRPD1	94	93.750	Nomascus_leucogenys
ENSTRUG00000008977	snrpd1	100	96.429	ENSODEG00000005764	SNRPD1	94	96.429	Octodon_degus
ENSTRUG00000008977	snrpd1	100	98.214	ENSONIG00000002486	snrpd1	94	98.214	Oreochromis_niloticus
ENSTRUG00000008977	snrpd1	85	85.263	ENSOANG00000004638	-	80	85.263	Ornithorhynchus_anatinus
ENSTRUG00000008977	snrpd1	100	96.429	ENSOCUG00000023761	-	96	96.429	Oryctolagus_cuniculus
ENSTRUG00000008977	snrpd1	94	95.238	ENSOCUG00000014399	-	88	95.238	Oryctolagus_cuniculus
ENSTRUG00000008977	snrpd1	100	98.214	ENSORLG00000012516	snrpd1	100	98.214	Oryzias_latipes
ENSTRUG00000008977	snrpd1	100	98.214	ENSORLG00020005743	snrpd1	94	98.214	Oryzias_latipes_hni
ENSTRUG00000008977	snrpd1	100	98.214	ENSORLG00015013402	snrpd1	94	98.214	Oryzias_latipes_hsok
ENSTRUG00000008977	snrpd1	100	98.214	ENSOMEG00000011571	snrpd1	94	98.214	Oryzias_melastigma
ENSTRUG00000008977	snrpd1	100	96.429	ENSOGAG00000007833	SNRPD1	94	96.429	Otolemur_garnettii
ENSTRUG00000008977	snrpd1	79	95.506	ENSOARG00000003413	-	67	95.506	Ovis_aries
ENSTRUG00000008977	snrpd1	100	96.429	ENSPPAG00000042593	SNRPD1	94	96.429	Pan_paniscus
ENSTRUG00000008977	snrpd1	100	96.429	ENSPPRG00000002399	SNRPD1	94	96.429	Panthera_pardus
ENSTRUG00000008977	snrpd1	94	69.524	ENSPPRG00000005009	-	85	69.524	Panthera_pardus
ENSTRUG00000008977	snrpd1	100	96.429	ENSPTIG00000013206	SNRPD1	98	96.429	Panthera_tigris_altaica
ENSTRUG00000008977	snrpd1	85	91.579	ENSPTRG00000050159	-	81	91.579	Pan_troglodytes
ENSTRUG00000008977	snrpd1	100	96.429	ENSPTRG00000009909	SNRPD1	94	96.429	Pan_troglodytes
ENSTRUG00000008977	snrpd1	100	96.429	ENSPANG00000023478	SNRPD1	94	96.429	Papio_anubis
ENSTRUG00000008977	snrpd1	100	97.321	ENSPKIG00000021610	snrpd1	100	97.321	Paramormyrops_kingsleyae
ENSTRUG00000008977	snrpd1	100	96.429	ENSPKIG00000003985	SNRPD1	94	96.429	Paramormyrops_kingsleyae
ENSTRUG00000008977	snrpd1	100	98.214	ENSPMGG00000001862	snrpd1	94	98.214	Periophthalmus_magnuspinnatus
ENSTRUG00000008977	snrpd1	100	96.429	ENSPEMG00000014773	-	94	96.429	Peromyscus_maniculatus_bairdii
ENSTRUG00000008977	snrpd1	85	82.474	ENSPMAG00000003938	-	80	82.474	Petromyzon_marinus
ENSTRUG00000008977	snrpd1	100	96.429	ENSPCIG00000020320	SNRPD1	100	96.429	Phascolarctos_cinereus
ENSTRUG00000008977	snrpd1	100	92.857	ENSPFOG00000012448	SNRPD1	94	92.857	Poecilia_formosa
ENSTRUG00000008977	snrpd1	100	92.857	ENSPLAG00000006738	snrpd1	94	92.857	Poecilia_latipinna
ENSTRUG00000008977	snrpd1	100	92.857	ENSPMEG00000021942	snrpd1	94	92.857	Poecilia_mexicana
ENSTRUG00000008977	snrpd1	100	98.214	ENSPREG00000007094	snrpd1	94	98.214	Poecilia_reticulata
ENSTRUG00000008977	snrpd1	100	96.429	ENSPPYG00000025874	SNRPD1	94	96.429	Pongo_abelii
ENSTRUG00000008977	snrpd1	100	96.429	ENSPCOG00000013327	SNRPD1	94	96.429	Propithecus_coquereli
ENSTRUG00000008977	snrpd1	100	96.429	ENSPVAG00000005511	SNRPD1	75	96.429	Pteropus_vampyrus
ENSTRUG00000008977	snrpd1	100	98.214	ENSPNAG00000017824	snrpd1	94	98.214	Pygocentrus_nattereri
ENSTRUG00000008977	snrpd1	100	96.429	ENSRNOG00000013714	Snrpd1	94	96.429	Rattus_norvegicus
ENSTRUG00000008977	snrpd1	100	96.429	ENSRBIG00000022996	SNRPD1	94	96.429	Rhinopithecus_bieti
ENSTRUG00000008977	snrpd1	100	96.429	ENSRROG00000027640	SNRPD1	94	96.429	Rhinopithecus_roxellana
ENSTRUG00000008977	snrpd1	100	96.429	ENSSBOG00000020998	SNRPD1	94	96.429	Saimiri_boliviensis_boliviensis
ENSTRUG00000008977	snrpd1	100	96.429	ENSSHAG00000011791	SNRPD1	94	96.429	Sarcophilus_harrisii
ENSTRUG00000008977	snrpd1	100	97.321	ENSSFOG00015022253	-	94	97.321	Scleropages_formosus
ENSTRUG00000008977	snrpd1	100	97.321	ENSSFOG00015008809	-	94	97.321	Scleropages_formosus
ENSTRUG00000008977	snrpd1	100	99.107	ENSSMAG00000008765	snrpd1	100	99.107	Scophthalmus_maximus
ENSTRUG00000008977	snrpd1	100	98.214	ENSSDUG00000010521	snrpd1	95	98.214	Seriola_dumerili
ENSTRUG00000008977	snrpd1	100	98.214	ENSSLDG00000011858	snrpd1	94	98.214	Seriola_lalandi_dorsalis
ENSTRUG00000008977	snrpd1	58	95.385	ENSSARG00000004271	SNRPD1	97	95.385	Sorex_araneus
ENSTRUG00000008977	snrpd1	100	96.429	ENSSPUG00000002824	SNRPD1	94	96.429	Sphenodon_punctatus
ENSTRUG00000008977	snrpd1	100	98.214	ENSSPAG00000015229	snrpd1	100	98.214	Stegastes_partitus
ENSTRUG00000008977	snrpd1	100	96.429	ENSSSCG00000003701	SNRPD1	100	96.429	Sus_scrofa
ENSTRUG00000008977	snrpd1	100	96.429	ENSTGUG00000005095	SNRPD1	94	96.429	Taeniopygia_guttata
ENSTRUG00000008977	snrpd1	86	93.750	ENSTNIG00000001224	snrpd1	92	93.750	Tetraodon_nigroviridis
ENSTRUG00000008977	snrpd1	72	95.062	ENSTBEG00000013776	SNRPD1	92	95.062	Tupaia_belangeri
ENSTRUG00000008977	snrpd1	100	96.429	ENSTTRG00000002654	SNRPD1	97	96.429	Tursiops_truncatus
ENSTRUG00000008977	snrpd1	100	96.429	ENSUAMG00000013431	SNRPD1	96	96.429	Ursus_americanus
ENSTRUG00000008977	snrpd1	100	96.429	ENSUMAG00000019740	SNRPD1	94	96.429	Ursus_maritimus
ENSTRUG00000008977	snrpd1	100	96.429	ENSVPAG00000010056	SNRPD1	75	96.429	Vicugna_pacos
ENSTRUG00000008977	snrpd1	100	96.429	ENSVVUG00000004009	SNRPD1	100	96.429	Vulpes_vulpes
ENSTRUG00000008977	snrpd1	94	95.238	ENSXETG00000027354	snrpd1	88	95.238	Xenopus_tropicalis
ENSTRUG00000008977	snrpd1	100	98.214	ENSXCOG00000020108	snrpd1	94	98.214	Xiphophorus_couchianus
ENSTRUG00000008977	snrpd1	100	98.214	ENSXMAG00000003368	snrpd1	94	98.214	Xiphophorus_maculatus