EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000009006 (Gene tree)
Gene ID: 101061645
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 1813 bases
Position: chr10:6454624-6456436
Accession: 101061645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000022653	GTP_EFTU	PF00009.27	1.9e-53	1	1
ENSTRUP00000022653	MMR_HSR1	PF01926.23	1.5e-07	1	1
ENSTRUP00000022653	GTP_EFTU_D2	PF03144.25	3.4e-12	1	1
ENSTRUP00000022653	GTP_EFTU_D3	PF03143.17	1.9e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000022747	-	1347	XM_003968082	ENSTRUP00000022653	448 (aa)	XP_003968131	H2TDB1

Gene Model

Click here to download ENSTRUG00000009006's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000009006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000009006	si:dkey-37o8.1	100	68.222	ENSTRUG00000012893	eef1a1b	93	80.488
ENSTRUG00000009006	si:dkey-37o8.1	97	37.443	ENSTRUG00000016128	hbs1l	64	40.503
ENSTRUG00000009006	si:dkey-37o8.1	98	69.932	ENSTRUG00000005727	ef-1a	95	69.932
ENSTRUG00000009006	si:dkey-37o8.1	99	69.820	ENSTRUG00000005066	-	96	69.820
ENSTRUG00000009006	si:dkey-37o8.1	98	36.136	ENSTRUG00000012645	gspt1l	74	36.136
ENSTRUG00000009006	si:dkey-37o8.1	93	34.845	ENSTRUG00000016971	-	100	34.845
ENSTRUG00000009006	si:dkey-37o8.1	100	71.333	ENSTRUG00000005416	-	97	71.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000009006	si:dkey-37o8.1	99	91.946	ENSAPOG00000016459	si:dkey-37o8.1	98	91.946	Acanthochromis_polyacanthus
ENSTRUG00000009006	si:dkey-37o8.1	96	90.531	ENSACIG00000020985	si:dkey-37o8.1	81	90.531	Amphilophus_citrinellus
ENSTRUG00000009006	si:dkey-37o8.1	100	92.070	ENSAOCG00000002663	si:dkey-37o8.1	99	92.070	Amphiprion_ocellaris
ENSTRUG00000009006	si:dkey-37o8.1	100	92.291	ENSAPEG00000012670	si:dkey-37o8.1	99	92.291	Amphiprion_percula
ENSTRUG00000009006	si:dkey-37o8.1	93	94.019	ENSATEG00000002217	si:dkey-37o8.1	98	94.019	Anabas_testudineus
ENSTRUG00000009006	si:dkey-37o8.1	100	90.728	ENSACLG00000003519	si:dkey-37o8.1	99	90.728	Astatotilapia_calliptera
ENSTRUG00000009006	si:dkey-37o8.1	100	84.396	ENSAMXG00000002728	si:dkey-37o8.1	99	84.396	Astyanax_mexicanus
ENSTRUG00000009006	si:dkey-37o8.1	98	74.603	ENSCPBG00000020570	-	87	74.603	Chrysemys_picta_bellii
ENSTRUG00000009006	si:dkey-37o8.1	100	86.154	ENSCSEG00000019807	si:dkey-37o8.1	99	85.435	Cynoglossus_semilaevis
ENSTRUG00000009006	si:dkey-37o8.1	99	89.013	ENSCVAG00000009828	si:dkey-37o8.1	98	89.013	Cyprinodon_variegatus
ENSTRUG00000009006	si:dkey-37o8.1	98	82.500	ENSDARG00000071727	si:dkey-37o8.1	91	82.500	Danio_rerio
ENSTRUG00000009006	si:dkey-37o8.1	99	85.169	ENSELUG00000007495	si:dkey-37o8.1	97	85.169	Esox_lucius
ENSTRUG00000009006	si:dkey-37o8.1	99	88.989	ENSFHEG00000017452	si:dkey-37o8.1	97	88.989	Fundulus_heteroclitus
ENSTRUG00000009006	si:dkey-37o8.1	98	81.818	ENSGMOG00000006122	si:dkey-37o8.1	97	81.818	Gadus_morhua
ENSTRUG00000009006	si:dkey-37o8.1	99	82.472	ENSGAFG00000000367	si:dkey-37o8.1	99	82.472	Gambusia_affinis
ENSTRUG00000009006	si:dkey-37o8.1	99	89.438	ENSGACG00000004505	si:dkey-37o8.1	99	88.326	Gasterosteus_aculeatus
ENSTRUG00000009006	si:dkey-37o8.1	98	74.603	ENSGAGG00000007724	-	95	74.603	Gopherus_agassizii
ENSTRUG00000009006	si:dkey-37o8.1	100	90.508	ENSHBUG00000015515	si:dkey-37o8.1	99	90.508	Haplochromis_burtoni
ENSTRUG00000009006	si:dkey-37o8.1	100	79.778	ENSHCOG00000001215	si:dkey-37o8.1	99	79.778	Hippocampus_comes
ENSTRUG00000009006	si:dkey-37o8.1	98	85.000	ENSIPUG00000004067	si:dkey-37o8.1	96	85.000	Ictalurus_punctatus
ENSTRUG00000009006	si:dkey-37o8.1	99	89.663	ENSKMAG00000015910	si:dkey-37o8.1	97	89.663	Kryptolebias_marmoratus
ENSTRUG00000009006	si:dkey-37o8.1	99	93.258	ENSLBEG00000021334	si:dkey-37o8.1	88	93.258	Labrus_bergylta
ENSTRUG00000009006	si:dkey-37o8.1	98	76.364	ENSLACG00000003948	si:dkey-37o8.1	96	76.364	Latimeria_chalumnae
ENSTRUG00000009006	si:dkey-37o8.1	99	81.208	ENSLOCG00000011245	si:dkey-37o8.1	97	81.208	Lepisosteus_oculatus
ENSTRUG00000009006	si:dkey-37o8.1	98	75.909	ENSMAMG00000009907	si:dkey-37o8.1	92	75.909	Mastacembelus_armatus
ENSTRUG00000009006	si:dkey-37o8.1	100	90.728	ENSMZEG00005018358	si:dkey-37o8.1	99	90.728	Maylandia_zebra
ENSTRUG00000009006	si:dkey-37o8.1	99	92.634	ENSMMOG00000004111	si:dkey-37o8.1	98	92.634	Mola_mola
ENSTRUG00000009006	si:dkey-37o8.1	97	82.339	ENSMALG00000017152	si:dkey-37o8.1	99	82.339	Monopterus_albus
ENSTRUG00000009006	si:dkey-37o8.1	100	90.728	ENSNBRG00000013552	si:dkey-37o8.1	99	90.728	Neolamprologus_brichardi
ENSTRUG00000009006	si:dkey-37o8.1	100	90.949	ENSONIG00000006165	si:dkey-37o8.1	99	90.949	Oreochromis_niloticus
ENSTRUG00000009006	si:dkey-37o8.1	100	89.845	ENSORLG00000019066	si:dkey-37o8.1	99	89.845	Oryzias_latipes
ENSTRUG00000009006	si:dkey-37o8.1	100	89.845	ENSORLG00020008094	si:dkey-37o8.1	99	89.845	Oryzias_latipes_hni
ENSTRUG00000009006	si:dkey-37o8.1	100	89.625	ENSORLG00015008410	si:dkey-37o8.1	99	89.625	Oryzias_latipes_hsok
ENSTRUG00000009006	si:dkey-37o8.1	99	90.112	ENSOMEG00000001868	si:dkey-37o8.1	98	90.112	Oryzias_melastigma
ENSTRUG00000009006	si:dkey-37o8.1	98	83.409	ENSPKIG00000017246	si:dkey-37o8.1	96	83.409	Paramormyrops_kingsleyae
ENSTRUG00000009006	si:dkey-37o8.1	58	68.148	ENSPSIG00000008080	-	95	68.148	Pelodiscus_sinensis
ENSTRUG00000009006	si:dkey-37o8.1	99	89.663	ENSPFOG00000013173	si:dkey-37o8.1	97	89.663	Poecilia_formosa
ENSTRUG00000009006	si:dkey-37o8.1	96	89.120	ENSPLAG00000010405	si:dkey-37o8.1	97	88.989	Poecilia_latipinna
ENSTRUG00000009006	si:dkey-37o8.1	99	90.112	ENSPMEG00000015233	si:dkey-37o8.1	97	90.112	Poecilia_mexicana
ENSTRUG00000009006	si:dkey-37o8.1	99	90.068	ENSPREG00000006280	si:dkey-37o8.1	98	90.068	Poecilia_reticulata
ENSTRUG00000009006	si:dkey-37o8.1	100	90.066	ENSPNYG00000002059	si:dkey-37o8.1	99	90.066	Pundamilia_nyererei
ENSTRUG00000009006	si:dkey-37o8.1	98	85.000	ENSPNAG00000009990	si:dkey-37o8.1	96	85.000	Pygocentrus_nattereri
ENSTRUG00000009006	si:dkey-37o8.1	98	82.432	ENSSFOG00015019070	si:dkey-37o8.1	98	82.432	Scleropages_formosus
ENSTRUG00000009006	si:dkey-37o8.1	99	94.170	ENSSMAG00000016143	si:dkey-37o8.1	98	94.170	Scophthalmus_maximus
ENSTRUG00000009006	si:dkey-37o8.1	100	92.731	ENSSDUG00000009163	si:dkey-37o8.1	99	92.731	Seriola_dumerili
ENSTRUG00000009006	si:dkey-37o8.1	100	92.952	ENSSLDG00000023761	si:dkey-37o8.1	99	92.952	Seriola_lalandi_dorsalis
ENSTRUG00000009006	si:dkey-37o8.1	99	72.646	ENSSPUG00000007467	-	98	72.383	Sphenodon_punctatus
ENSTRUG00000009006	si:dkey-37o8.1	100	91.850	ENSSPAG00000013856	si:dkey-37o8.1	99	91.850	Stegastes_partitus
ENSTRUG00000009006	si:dkey-37o8.1	99	94.013	ENSTNIG00000017138	si:dkey-37o8.1	97	94.013	Tetraodon_nigroviridis
ENSTRUG00000009006	si:dkey-37o8.1	98	76.310	ENSXETG00000017744	42Sp50	96	75.676	Xenopus_tropicalis
ENSTRUG00000009006	si:dkey-37o8.1	99	90.293	ENSXCOG00000012296	si:dkey-37o8.1	98	90.293	Xiphophorus_couchianus
ENSTRUG00000009006	si:dkey-37o8.1	99	89.888	ENSXMAG00000001998	si:dkey-37o8.1	97	89.888	Xiphophorus_maculatus