EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000009089 (Gene tree)
Gene ID: 101069147
Gene Symbol: sf3a3
Alias: wu:fi15a06|wu:fj94f01|zgc:110227
Full Name: splicing factor 3a subunit 3
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 4177 bases
Position: chr12:6300362-6304538
Accession: 101069147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000022849	SF3a60_bindingd	PF12108.8	1.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000022944	-	2376	XM_003969065	ENSTRUP00000022849	501 (aa)	XP_003969114	H2TDV7

Gene Model

Click here to download ENSTRUG00000009089's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000009089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000009089	sf3a3	100	89.820	ENSG00000183431	SF3A3	100	89.820	Homo_sapiens
ENSTRUG00000009089	sf3a3	100	96.208	ENSAPOG00000015608	sf3a3	100	96.208	Acanthochromis_polyacanthus
ENSTRUG00000009089	sf3a3	100	89.820	ENSAMEG00000001262	SF3A3	100	89.820	Ailuropoda_melanoleuca
ENSTRUG00000009089	sf3a3	95	89.941	ENSACIG00000009061	sf3a3	99	89.941	Amphilophus_citrinellus
ENSTRUG00000009089	sf3a3	100	96.407	ENSAOCG00000013954	sf3a3	100	96.407	Amphiprion_ocellaris
ENSTRUG00000009089	sf3a3	100	96.407	ENSAPEG00000007297	sf3a3	100	96.407	Amphiprion_percula
ENSTRUG00000009089	sf3a3	100	96.407	ENSATEG00000008754	sf3a3	100	96.407	Anabas_testudineus
ENSTRUG00000009089	sf3a3	94	90.618	ENSAPLG00000014900	SF3A3	100	90.618	Anas_platyrhynchos
ENSTRUG00000009089	sf3a3	100	88.623	ENSACAG00000017058	SF3A3	100	88.623	Anolis_carolinensis
ENSTRUG00000009089	sf3a3	100	69.661	ENSANAG00000036903	-	100	69.661	Aotus_nancymaae
ENSTRUG00000009089	sf3a3	99	86.546	ENSANAG00000014878	SF3A3	100	86.546	Aotus_nancymaae
ENSTRUG00000009089	sf3a3	100	96.208	ENSACLG00000017977	sf3a3	100	96.208	Astatotilapia_calliptera
ENSTRUG00000009089	sf3a3	100	92.615	ENSAMXG00000016855	sf3a3	87	92.615	Astyanax_mexicanus
ENSTRUG00000009089	sf3a3	100	89.820	ENSBTAG00000007299	SF3A3	100	89.820	Bos_taurus
ENSTRUG00000009089	sf3a3	100	51.690	WBGene00011758	T13H5.4	100	51.690	Caenorhabditis_elegans
ENSTRUG00000009089	sf3a3	100	89.820	ENSCJAG00000002176	SF3A3	100	89.820	Callithrix_jacchus
ENSTRUG00000009089	sf3a3	100	89.820	ENSCAFG00000000683	-	100	89.820	Canis_familiaris
ENSTRUG00000009089	sf3a3	100	89.820	ENSCAFG00000003222	-	100	89.820	Canis_familiaris
ENSTRUG00000009089	sf3a3	100	89.820	ENSCAFG00020006186	SF3A3	100	89.820	Canis_lupus_dingo
ENSTRUG00000009089	sf3a3	100	89.820	ENSCHIG00000020638	SF3A3	100	89.820	Capra_hircus
ENSTRUG00000009089	sf3a3	100	83.832	ENSTSYG00000008417	SF3A3	100	83.832	Carlito_syrichta
ENSTRUG00000009089	sf3a3	85	59.268	ENSCAPG00000003466	SF3A3	100	56.522	Cavia_aperea
ENSTRUG00000009089	sf3a3	100	90.020	ENSCPOG00000008660	SF3A3	100	90.020	Cavia_porcellus
ENSTRUG00000009089	sf3a3	100	89.820	ENSCCAG00000033732	SF3A3	100	89.820	Cebus_capucinus
ENSTRUG00000009089	sf3a3	100	64.271	ENSCCAG00000034048	-	100	61.630	Cebus_capucinus
ENSTRUG00000009089	sf3a3	94	72.495	ENSCATG00000041660	-	100	73.987	Cercocebus_atys
ENSTRUG00000009089	sf3a3	100	89.820	ENSCATG00000043496	SF3A3	100	89.820	Cercocebus_atys
ENSTRUG00000009089	sf3a3	100	66.733	ENSCATG00000043537	-	100	67.331	Cercocebus_atys
ENSTRUG00000009089	sf3a3	100	90.220	ENSCLAG00000010838	SF3A3	100	90.220	Chinchilla_lanigera
ENSTRUG00000009089	sf3a3	95	89.286	ENSCSAG00000001120	SF3A3	100	89.286	Chlorocebus_sabaeus
ENSTRUG00000009089	sf3a3	80	84.656	ENSCHOG00000006849	SF3A3	80	84.656	Choloepus_hoffmanni
ENSTRUG00000009089	sf3a3	100	82.036	ENSCPBG00000018291	-	100	82.036	Chrysemys_picta_bellii
ENSTRUG00000009089	sf3a3	70	61.050	ENSCPBG00000007472	-	95	61.050	Chrysemys_picta_bellii
ENSTRUG00000009089	sf3a3	100	68.127	ENSCING00000002730	-	100	68.127	Ciona_intestinalis
ENSTRUG00000009089	sf3a3	100	66.667	ENSCSAVG00000005063	-	100	66.667	Ciona_savignyi
ENSTRUG00000009089	sf3a3	100	89.820	ENSCANG00000042083	SF3A3	100	89.820	Colobus_angolensis_palliatus
ENSTRUG00000009089	sf3a3	100	64.072	ENSCANG00000035535	-	100	64.072	Colobus_angolensis_palliatus
ENSTRUG00000009089	sf3a3	100	90.419	ENSCGRG00001011320	Sf3a3	100	90.419	Cricetulus_griseus_chok1gshd
ENSTRUG00000009089	sf3a3	100	90.419	ENSCGRG00000012156	Sf3a3	100	90.419	Cricetulus_griseus_crigri
ENSTRUG00000009089	sf3a3	100	95.010	ENSCSEG00000010401	sf3a3	100	95.010	Cynoglossus_semilaevis
ENSTRUG00000009089	sf3a3	94	94.456	ENSCVAG00000010239	sf3a3	95	94.456	Cyprinodon_variegatus
ENSTRUG00000009089	sf3a3	100	92.216	ENSDARG00000100114	sf3a3	100	92.601	Danio_rerio
ENSTRUG00000009089	sf3a3	91	89.497	ENSDNOG00000046628	SF3A3	99	89.497	Dasypus_novemcinctus
ENSTRUG00000009089	sf3a3	100	90.020	ENSDORG00000008798	Sf3a3	100	90.020	Dipodomys_ordii
ENSTRUG00000009089	sf3a3	100	64.427	FBgn0014366	noi	100	64.229	Drosophila_melanogaster
ENSTRUG00000009089	sf3a3	100	77.535	ENSEBUG00000015411	sf3a3	92	77.932	Eptatretus_burgeri
ENSTRUG00000009089	sf3a3	100	89.820	ENSEASG00005012906	SF3A3	100	89.820	Equus_asinus_asinus
ENSTRUG00000009089	sf3a3	100	89.820	ENSECAG00000017333	SF3A3	100	89.820	Equus_caballus
ENSTRUG00000009089	sf3a3	100	91.617	ENSELUG00000010024	sf3a3	100	91.617	Esox_lucius
ENSTRUG00000009089	sf3a3	100	89.820	ENSFCAG00000027772	SF3A3	100	89.820	Felis_catus
ENSTRUG00000009089	sf3a3	100	90.020	ENSFALG00000001003	SF3A3	100	90.020	Ficedula_albicollis
ENSTRUG00000009089	sf3a3	100	90.020	ENSFDAG00000020908	SF3A3	100	90.020	Fukomys_damarensis
ENSTRUG00000009089	sf3a3	100	95.609	ENSFHEG00000019107	sf3a3	100	95.609	Fundulus_heteroclitus
ENSTRUG00000009089	sf3a3	100	90.818	ENSGMOG00000015540	sf3a3	100	90.818	Gadus_morhua
ENSTRUG00000009089	sf3a3	100	89.820	ENSGALG00000001540	SF3A3	100	89.820	Gallus_gallus
ENSTRUG00000009089	sf3a3	100	95.210	ENSGAFG00000002320	sf3a3	100	95.210	Gambusia_affinis
ENSTRUG00000009089	sf3a3	100	95.210	ENSGACG00000007842	sf3a3	100	95.210	Gasterosteus_aculeatus
ENSTRUG00000009089	sf3a3	100	89.820	ENSGAGG00000014980	SF3A3	100	89.820	Gopherus_agassizii
ENSTRUG00000009089	sf3a3	100	69.261	ENSGGOG00000022611	-	100	68.862	Gorilla_gorilla
ENSTRUG00000009089	sf3a3	100	89.820	ENSGGOG00000013928	SF3A3	100	89.820	Gorilla_gorilla
ENSTRUG00000009089	sf3a3	100	96.208	ENSHBUG00000018158	sf3a3	100	96.208	Haplochromis_burtoni
ENSTRUG00000009089	sf3a3	100	90.020	ENSHGLG00000012502	SF3A3	100	90.020	Heterocephalus_glaber_female
ENSTRUG00000009089	sf3a3	100	90.020	ENSHGLG00100010546	SF3A3	100	90.020	Heterocephalus_glaber_male
ENSTRUG00000009089	sf3a3	100	94.810	ENSHCOG00000015109	sf3a3	100	94.810	Hippocampus_comes
ENSTRUG00000009089	sf3a3	100	92.814	ENSIPUG00000011603	sf3a3	100	92.814	Ictalurus_punctatus
ENSTRUG00000009089	sf3a3	100	90.220	ENSSTOG00000001691	SF3A3	100	90.220	Ictidomys_tridecemlineatus
ENSTRUG00000009089	sf3a3	100	90.220	ENSJJAG00000012404	Sf3a3	100	90.220	Jaculus_jaculus
ENSTRUG00000009089	sf3a3	100	95.609	ENSKMAG00000007632	sf3a3	100	95.609	Kryptolebias_marmoratus
ENSTRUG00000009089	sf3a3	100	87.052	ENSLBEG00000000816	sf3a3	100	87.052	Labrus_bergylta
ENSTRUG00000009089	sf3a3	100	92.615	ENSLOCG00000003273	sf3a3	100	92.615	Lepisosteus_oculatus
ENSTRUG00000009089	sf3a3	100	78.643	ENSLAFG00000008094	SF3A3	100	78.643	Loxodonta_africana
ENSTRUG00000009089	sf3a3	100	89.820	ENSMFAG00000043047	SF3A3	100	89.820	Macaca_fascicularis
ENSTRUG00000009089	sf3a3	94	71.429	ENSMFAG00000036706	-	100	73.134	Macaca_fascicularis
ENSTRUG00000009089	sf3a3	100	89.820	ENSMMUG00000023199	SF3A3	100	89.820	Macaca_mulatta
ENSTRUG00000009089	sf3a3	100	70.120	ENSMMUG00000038820	-	100	71.713	Macaca_mulatta
ENSTRUG00000009089	sf3a3	100	89.820	ENSMNEG00000044291	SF3A3	100	89.820	Macaca_nemestrina
ENSTRUG00000009089	sf3a3	94	69.510	ENSMNEG00000028686	-	100	71.215	Macaca_nemestrina
ENSTRUG00000009089	sf3a3	100	89.820	ENSMLEG00000030641	SF3A3	100	89.820	Mandrillus_leucophaeus
ENSTRUG00000009089	sf3a3	100	66.135	ENSMLEG00000028631	-	100	66.733	Mandrillus_leucophaeus
ENSTRUG00000009089	sf3a3	100	74.451	ENSMLEG00000036714	-	100	75.848	Mandrillus_leucophaeus
ENSTRUG00000009089	sf3a3	100	97.006	ENSMAMG00000001942	sf3a3	100	97.006	Mastacembelus_armatus
ENSTRUG00000009089	sf3a3	100	96.208	ENSMZEG00005016987	sf3a3	100	96.208	Maylandia_zebra
ENSTRUG00000009089	sf3a3	100	85.288	ENSMGAG00000002875	SF3A3	100	85.288	Meleagris_gallopavo
ENSTRUG00000009089	sf3a3	91	87.336	ENSMICG00000026541	-	100	87.336	Microcebus_murinus
ENSTRUG00000009089	sf3a3	100	84.631	ENSMICG00000043548	-	100	84.631	Microcebus_murinus
ENSTRUG00000009089	sf3a3	100	86.228	ENSMICG00000001485	-	100	86.228	Microcebus_murinus
ENSTRUG00000009089	sf3a3	95	84.211	ENSMOCG00000014565	-	97	82.947	Microtus_ochrogaster
ENSTRUG00000009089	sf3a3	100	87.226	ENSMOCG00000019939	-	100	87.226	Microtus_ochrogaster
ENSTRUG00000009089	sf3a3	100	96.407	ENSMMOG00000014307	sf3a3	100	96.407	Mola_mola
ENSTRUG00000009089	sf3a3	100	82.834	ENSMODG00000024045	-	100	82.834	Monodelphis_domestica
ENSTRUG00000009089	sf3a3	100	70.874	ENSMODG00000017729	-	100	69.884	Monodelphis_domestica
ENSTRUG00000009089	sf3a3	100	95.808	ENSMALG00000004836	sf3a3	100	95.833	Monopterus_albus
ENSTRUG00000009089	sf3a3	100	90.419	MGP_CAROLIEiJ_G0026449	Sf3a3	100	90.419	Mus_caroli
ENSTRUG00000009089	sf3a3	100	90.419	ENSMUSG00000028902	Sf3a3	100	90.419	Mus_musculus
ENSTRUG00000009089	sf3a3	100	85.429	MGP_PahariEiJ_G0028780	Sf3a3	100	85.429	Mus_pahari
ENSTRUG00000009089	sf3a3	100	90.419	MGP_SPRETEiJ_G0027428	Sf3a3	100	90.419	Mus_spretus
ENSTRUG00000009089	sf3a3	100	89.820	ENSMLUG00000000991	SF3A3	100	89.820	Myotis_lucifugus
ENSTRUG00000009089	sf3a3	100	84.830	ENSNGAG00000018032	Sf3a3	100	84.830	Nannospalax_galili
ENSTRUG00000009089	sf3a3	100	82.435	ENSNLEG00000011720	SF3A3	100	82.435	Nomascus_leucogenys
ENSTRUG00000009089	sf3a3	100	90.020	ENSOPRG00000012785	SF3A3	100	90.020	Ochotona_princeps
ENSTRUG00000009089	sf3a3	100	85.828	ENSODEG00000007470	-	100	85.828	Octodon_degus
ENSTRUG00000009089	sf3a3	100	84.631	ENSODEG00000006854	-	100	87.226	Octodon_degus
ENSTRUG00000009089	sf3a3	100	78.244	ENSODEG00000018393	-	100	78.044	Octodon_degus
ENSTRUG00000009089	sf3a3	100	76.295	ENSODEG00000000937	-	100	78.685	Octodon_degus
ENSTRUG00000009089	sf3a3	87	96.092	ENSONIG00000010296	sf3a3	100	96.092	Oreochromis_niloticus
ENSTRUG00000009089	sf3a3	94	89.552	ENSOANG00000002473	SF3A3	100	89.552	Ornithorhynchus_anatinus
ENSTRUG00000009089	sf3a3	100	90.020	ENSOCUG00000005407	SF3A3	100	90.020	Oryctolagus_cuniculus
ENSTRUG00000009089	sf3a3	100	94.810	ENSORLG00000008175	sf3a3	100	94.810	Oryzias_latipes
ENSTRUG00000009089	sf3a3	100	94.611	ENSORLG00020013708	sf3a3	100	94.611	Oryzias_latipes_hni
ENSTRUG00000009089	sf3a3	100	94.411	ENSORLG00015004104	sf3a3	100	94.411	Oryzias_latipes_hsok
ENSTRUG00000009089	sf3a3	100	94.611	ENSOMEG00000020177	sf3a3	100	94.611	Oryzias_melastigma
ENSTRUG00000009089	sf3a3	100	89.820	ENSOARG00000019950	SF3A3	100	89.820	Ovis_aries
ENSTRUG00000009089	sf3a3	100	68.663	ENSPPAG00000039955	-	100	68.263	Pan_paniscus
ENSTRUG00000009089	sf3a3	100	89.820	ENSPPAG00000034066	SF3A3	100	89.820	Pan_paniscus
ENSTRUG00000009089	sf3a3	100	89.820	ENSPPRG00000001258	SF3A3	100	89.820	Panthera_pardus
ENSTRUG00000009089	sf3a3	100	89.820	ENSPTIG00000007515	SF3A3	100	89.820	Panthera_tigris_altaica
ENSTRUG00000009089	sf3a3	100	89.820	ENSPTRG00000000559	SF3A3	100	89.820	Pan_troglodytes
ENSTRUG00000009089	sf3a3	100	69.860	ENSPTRG00000046013	-	100	69.461	Pan_troglodytes
ENSTRUG00000009089	sf3a3	100	89.820	ENSPANG00000021859	SF3A3	100	89.820	Papio_anubis
ENSTRUG00000009089	sf3a3	87	80.682	ENSPANG00000031214	-	100	64.671	Papio_anubis
ENSTRUG00000009089	sf3a3	100	76.846	ENSPANG00000029393	-	100	78.244	Papio_anubis
ENSTRUG00000009089	sf3a3	100	91.816	ENSPKIG00000004719	sf3a3	100	91.816	Paramormyrops_kingsleyae
ENSTRUG00000009089	sf3a3	100	88.072	ENSPSIG00000004273	SF3A3	100	88.072	Pelodiscus_sinensis
ENSTRUG00000009089	sf3a3	91	94.748	ENSPMGG00000003610	sf3a3	94	94.748	Periophthalmus_magnuspinnatus
ENSTRUG00000009089	sf3a3	100	90.419	ENSPEMG00000020805	Sf3a3	100	90.419	Peromyscus_maniculatus_bairdii
ENSTRUG00000009089	sf3a3	54	76.667	ENSPMAG00000001044	sf3a3	98	76.667	Petromyzon_marinus
ENSTRUG00000009089	sf3a3	100	90.020	ENSPCIG00000025719	SF3A3	100	90.020	Phascolarctos_cinereus
ENSTRUG00000009089	sf3a3	100	95.010	ENSPFOG00000005284	sf3a3	100	95.010	Poecilia_formosa
ENSTRUG00000009089	sf3a3	99	91.751	ENSPLAG00000003979	sf3a3	92	91.751	Poecilia_latipinna
ENSTRUG00000009089	sf3a3	78	90.331	ENSPMEG00000021132	sf3a3	88	90.331	Poecilia_mexicana
ENSTRUG00000009089	sf3a3	100	95.409	ENSPREG00000013802	sf3a3	100	95.409	Poecilia_reticulata
ENSTRUG00000009089	sf3a3	100	87.625	ENSPPYG00000001519	SF3A3	100	87.625	Pongo_abelii
ENSTRUG00000009089	sf3a3	100	83.832	ENSPCAG00000010734	SF3A3	100	83.832	Procavia_capensis
ENSTRUG00000009089	sf3a3	100	74.052	ENSPCOG00000017131	-	100	74.052	Propithecus_coquereli
ENSTRUG00000009089	sf3a3	100	78.770	ENSPCOG00000020389	-	100	78.770	Propithecus_coquereli
ENSTRUG00000009089	sf3a3	100	78.443	ENSPVAG00000010158	SF3A3	100	78.443	Pteropus_vampyrus
ENSTRUG00000009089	sf3a3	100	96.208	ENSPNYG00000000786	sf3a3	100	96.208	Pundamilia_nyererei
ENSTRUG00000009089	sf3a3	100	93.014	ENSPNAG00000010298	sf3a3	100	93.014	Pygocentrus_nattereri
ENSTRUG00000009089	sf3a3	100	90.419	ENSRNOG00000007629	Sf3a3	100	90.419	Rattus_norvegicus
ENSTRUG00000009089	sf3a3	100	66.866	ENSRBIG00000041123	-	100	66.866	Rhinopithecus_bieti
ENSTRUG00000009089	sf3a3	100	89.820	ENSRBIG00000043567	SF3A3	100	89.820	Rhinopithecus_bieti
ENSTRUG00000009089	sf3a3	100	65.868	ENSRBIG00000043833	-	100	65.868	Rhinopithecus_bieti
ENSTRUG00000009089	sf3a3	94	71.002	ENSRROG00000032346	-	100	71.002	Rhinopithecus_roxellana
ENSTRUG00000009089	sf3a3	100	89.820	ENSRROG00000033888	SF3A3	100	89.820	Rhinopithecus_roxellana
ENSTRUG00000009089	sf3a3	89	86.139	ENSSBOG00000032688	SF3A3	100	86.139	Saimiri_boliviensis_boliviensis
ENSTRUG00000009089	sf3a3	100	65.868	ENSSBOG00000026932	-	100	64.671	Saimiri_boliviensis_boliviensis
ENSTRUG00000009089	sf3a3	90	90.287	ENSSHAG00000014530	SF3A3	100	90.287	Sarcophilus_harrisii
ENSTRUG00000009089	sf3a3	100	94.012	ENSSFOG00015005975	sf3a3	100	94.012	Scleropages_formosus
ENSTRUG00000009089	sf3a3	100	95.808	ENSSMAG00000020213	sf3a3	100	95.808	Scophthalmus_maximus
ENSTRUG00000009089	sf3a3	100	92.216	ENSSDUG00000011590	sf3a3	100	92.216	Seriola_dumerili
ENSTRUG00000009089	sf3a3	100	96.806	ENSSLDG00000020635	sf3a3	100	96.806	Seriola_lalandi_dorsalis
ENSTRUG00000009089	sf3a3	100	89.222	ENSSPUG00000004010	SF3A3	100	89.222	Sphenodon_punctatus
ENSTRUG00000009089	sf3a3	100	97.006	ENSSPAG00000018653	sf3a3	100	97.006	Stegastes_partitus
ENSTRUG00000009089	sf3a3	100	89.820	ENSSSCG00000003643	SF3A3	100	89.820	Sus_scrofa
ENSTRUG00000009089	sf3a3	87	90.575	ENSTGUG00000001466	SF3A3	100	90.367	Taeniopygia_guttata
ENSTRUG00000009089	sf3a3	100	97.813	ENSTNIG00000009800	sf3a3	100	97.813	Tetraodon_nigroviridis
ENSTRUG00000009089	sf3a3	100	78.443	ENSTBEG00000007614	SF3A3	100	78.443	Tupaia_belangeri
ENSTRUG00000009089	sf3a3	100	89.621	ENSTTRG00000013519	SF3A3	100	89.621	Tursiops_truncatus
ENSTRUG00000009089	sf3a3	100	89.820	ENSUAMG00000006134	SF3A3	100	89.820	Ursus_americanus
ENSTRUG00000009089	sf3a3	100	89.820	ENSUMAG00000021250	SF3A3	100	89.820	Ursus_maritimus
ENSTRUG00000009089	sf3a3	66	95.349	ENSVPAG00000004778	SF3A3	73	95.349	Vicugna_pacos
ENSTRUG00000009089	sf3a3	100	86.228	ENSVVUG00000022908	SF3A3	100	86.228	Vulpes_vulpes
ENSTRUG00000009089	sf3a3	100	88.024	ENSXETG00000022923	sf3a3	100	88.024	Xenopus_tropicalis
ENSTRUG00000009089	sf3a3	100	95.210	ENSXMAG00000017165	sf3a3	100	95.210	Xiphophorus_maculatus