EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000009125 (Gene tree)
Gene ID: 101072123
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 46870 bases
Position: chr13:5389862-5436731
Accession: 101072123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000022945	ResIII	PF04851.15	3.4e-06	1	1
ENSTRUP00000022945	BRK	PF07533.16	4.8e-32	1	2
ENSTRUP00000022945	BRK	PF07533.16	4.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000023041	-	8658	XM_011609691	ENSTRUP00000022945	2885 (aa)	XP_011607993	H2TE53

Gene Model

Click here to download ENSTRUG00000009125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000009125's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000009125	chd9	58	72.193	ENSTRUG00000008632	chd7	51	72.450
ENSTRUG00000009125	chd9	60	60.312	ENSTRUG00000006682	chd8	98	71.639

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000009125	chd9	99	61.399	ENSG00000177200	CHD9	91	81.308	Homo_sapiens
ENSTRUG00000009125	chd9	99	81.350	ENSAPOG00000023034	chd9	99	86.391	Acanthochromis_polyacanthus
ENSTRUG00000009125	chd9	73	63.045	ENSAMEG00000016232	CHD9	86	69.560	Ailuropoda_melanoleuca
ENSTRUG00000009125	chd9	99	78.832	ENSACIG00000004097	chd9	98	78.832	Amphilophus_citrinellus
ENSTRUG00000009125	chd9	99	84.510	ENSAOCG00000005487	chd9	99	86.502	Amphiprion_ocellaris
ENSTRUG00000009125	chd9	99	84.546	ENSAPEG00000009859	chd9	99	86.542	Amphiprion_percula
ENSTRUG00000009125	chd9	99	83.472	ENSATEG00000002748	chd9	99	82.555	Anabas_testudineus
ENSTRUG00000009125	chd9	95	66.540	ENSAPLG00000002826	CHD9	61	76.867	Anas_platyrhynchos
ENSTRUG00000009125	chd9	66	72.004	ENSACAG00000016150	CHD9	60	76.485	Anolis_carolinensis
ENSTRUG00000009125	chd9	73	62.676	ENSANAG00000015630	CHD9	97	70.819	Aotus_nancymaae
ENSTRUG00000009125	chd9	99	80.667	ENSACLG00000016899	chd9	99	80.124	Astatotilapia_calliptera
ENSTRUG00000009125	chd9	94	68.499	ENSAMXG00000005652	chd9	99	74.889	Astyanax_mexicanus
ENSTRUG00000009125	chd9	99	60.492	ENSCJAG00000001573	CHD9	97	71.174	Callithrix_jacchus
ENSTRUG00000009125	chd9	73	62.875	ENSCAFG00000009699	CHD9	86	69.082	Canis_familiaris
ENSTRUG00000009125	chd9	73	62.875	ENSCAFG00020002879	CHD9	97	72.857	Canis_lupus_dingo
ENSTRUG00000009125	chd9	73	61.601	ENSCHIG00000021000	CHD9	61	74.328	Capra_hircus
ENSTRUG00000009125	chd9	73	62.790	ENSTSYG00000007693	CHD9	97	72.143	Carlito_syrichta
ENSTRUG00000009125	chd9	77	60.861	ENSCAPG00000011604	CHD9	57	61.041	Cavia_aperea
ENSTRUG00000009125	chd9	73	59.671	ENSCPOG00000036544	CHD9	68	71.622	Cavia_porcellus
ENSTRUG00000009125	chd9	73	62.796	ENSCCAG00000036178	CHD9	97	72.143	Cebus_capucinus
ENSTRUG00000009125	chd9	73	62.949	ENSCATG00000036753	CHD9	97	72.500	Cercocebus_atys
ENSTRUG00000009125	chd9	73	62.580	ENSCLAG00000007137	CHD9	95	80.336	Chinchilla_lanigera
ENSTRUG00000009125	chd9	73	62.444	ENSCSAG00000005311	CHD9	86	69.458	Chlorocebus_sabaeus
ENSTRUG00000009125	chd9	67	92.183	ENSCHOG00000003935	CHD9	52	92.183	Choloepus_hoffmanni
ENSTRUG00000009125	chd9	89	81.777	ENSCPBG00000012459	CHD9	86	79.181	Chrysemys_picta_bellii
ENSTRUG00000009125	chd9	73	62.801	ENSCANG00000030349	CHD9	97	72.500	Colobus_angolensis_palliatus
ENSTRUG00000009125	chd9	99	60.694	ENSCGRG00001016150	Chd9	56	75.536	Cricetulus_griseus_chok1gshd
ENSTRUG00000009125	chd9	99	60.694	ENSCGRG00000012850	Chd9	95	80.958	Cricetulus_griseus_crigri
ENSTRUG00000009125	chd9	99	78.848	ENSCSEG00000009209	chd9	99	81.855	Cynoglossus_semilaevis
ENSTRUG00000009125	chd9	97	77.793	ENSCVAG00000016195	chd9	99	76.965	Cyprinodon_variegatus
ENSTRUG00000009125	chd9	83	75.556	ENSDARG00000074498	chd9	99	75.466	Danio_rerio
ENSTRUG00000009125	chd9	55	75.950	ENSDNOG00000006045	CHD9	96	69.664	Dasypus_novemcinctus
ENSTRUG00000009125	chd9	65	89.683	ENSETEG00000009565	CHD9	80	79.365	Echinops_telfairi
ENSTRUG00000009125	chd9	79	78.030	ENSEASG00005014832	CHD9	98	77.922	Equus_asinus_asinus
ENSTRUG00000009125	chd9	73	62.865	ENSECAG00000011505	CHD9	60	76.056	Equus_caballus
ENSTRUG00000009125	chd9	79	86.099	ENSEEUG00000014515	CHD9	67	80.110	Erinaceus_europaeus
ENSTRUG00000009125	chd9	93	65.469	ENSELUG00000006031	chd9	99	75.664	Esox_lucius
ENSTRUG00000009125	chd9	73	62.971	ENSFCAG00000022534	CHD9	97	72.500	Felis_catus
ENSTRUG00000009125	chd9	83	69.443	ENSFALG00000013276	CHD9	67	76.107	Ficedula_albicollis
ENSTRUG00000009125	chd9	73	62.659	ENSFDAG00000021037	CHD9	60	76.056	Fukomys_damarensis
ENSTRUG00000009125	chd9	99	80.454	ENSFHEG00000006068	chd9	98	85.312	Fundulus_heteroclitus
ENSTRUG00000009125	chd9	67	84.511	ENSGMOG00000006040	chd9	81	84.228	Gadus_morhua
ENSTRUG00000009125	chd9	82	69.206	ENSGALG00000039178	CHD9	57	76.881	Gallus_gallus
ENSTRUG00000009125	chd9	99	77.333	ENSGAFG00000010014	chd9	99	84.463	Gambusia_affinis
ENSTRUG00000009125	chd9	81	83.306	ENSGACG00000016694	chd9	97	88.746	Gasterosteus_aculeatus
ENSTRUG00000009125	chd9	73	63.000	ENSGGOG00000014816	CHD9	97	72.143	Gorilla_gorilla
ENSTRUG00000009125	chd9	99	79.652	ENSHBUG00000023322	chd9	98	85.517	Haplochromis_burtoni
ENSTRUG00000009125	chd9	73	62.415	ENSHGLG00000014938	CHD9	95	81.055	Heterocephalus_glaber_female
ENSTRUG00000009125	chd9	97	75.018	ENSHCOG00000000937	chd9	99	79.871	Hippocampus_comes
ENSTRUG00000009125	chd9	84	75.579	ENSIPUG00000016448	chd9	97	80.216	Ictalurus_punctatus
ENSTRUG00000009125	chd9	99	60.334	ENSSTOG00000022273	CHD9	95	81.055	Ictidomys_tridecemlineatus
ENSTRUG00000009125	chd9	97	79.393	ENSKMAG00000016784	chd9	99	84.855	Kryptolebias_marmoratus
ENSTRUG00000009125	chd9	94	83.094	ENSLBEG00000012077	chd9	99	85.345	Labrus_bergylta
ENSTRUG00000009125	chd9	97	58.452	ENSLACG00000005557	CHD9	73	57.983	Latimeria_chalumnae
ENSTRUG00000009125	chd9	88	73.810	ENSLOCG00000007225	chd9	68	80.094	Lepisosteus_oculatus
ENSTRUG00000009125	chd9	73	62.075	ENSLAFG00000015374	CHD9	60	75.046	Loxodonta_africana
ENSTRUG00000009125	chd9	79	70.399	ENSMFAG00000041354	CHD9	97	72.500	Macaca_fascicularis
ENSTRUG00000009125	chd9	73	62.983	ENSMMUG00000016310	CHD9	97	72.500	Macaca_mulatta
ENSTRUG00000009125	chd9	89	62.732	ENSMNEG00000031494	CHD9	86	72.779	Macaca_nemestrina
ENSTRUG00000009125	chd9	73	62.938	ENSMLEG00000043219	CHD9	97	72.500	Mandrillus_leucophaeus
ENSTRUG00000009125	chd9	99	80.381	ENSMAMG00000003909	chd9	99	80.294	Mastacembelus_armatus
ENSTRUG00000009125	chd9	99	79.813	ENSMZEG00005006581	chd9	99	85.380	Maylandia_zebra
ENSTRUG00000009125	chd9	86	63.017	ENSMGAG00000004642	CHD9	59	71.498	Meleagris_gallopavo
ENSTRUG00000009125	chd9	73	62.750	ENSMICG00000016679	CHD9	97	73.214	Microcebus_murinus
ENSTRUG00000009125	chd9	99	81.481	ENSMMOG00000016406	chd9	99	81.362	Mola_mola
ENSTRUG00000009125	chd9	73	63.793	ENSMODG00000013142	-	98	76.664	Monodelphis_domestica
ENSTRUG00000009125	chd9	99	81.115	ENSMALG00000013306	chd9	99	81.278	Monopterus_albus
ENSTRUG00000009125	chd9	73	62.557	MGP_CAROLIEiJ_G0031364	Chd9	56	75.260	Mus_caroli
ENSTRUG00000009125	chd9	99	60.255	ENSMUSG00000056608	Chd9	95	80.120	Mus_musculus
ENSTRUG00000009125	chd9	73	62.086	MGP_SPRETEiJ_G0032483	Chd9	56	74.571	Mus_spretus
ENSTRUG00000009125	chd9	73	63.017	ENSMPUG00000003285	CHD9	86	69.715	Mustela_putorius_furo
ENSTRUG00000009125	chd9	99	60.714	ENSMLUG00000004456	CHD9	60	75.858	Myotis_lucifugus
ENSTRUG00000009125	chd9	99	81.008	ENSNBRG00000009423	chd9	99	84.889	Neolamprologus_brichardi
ENSTRUG00000009125	chd9	89	62.598	ENSNLEG00000001026	CHD9	67	75.995	Nomascus_leucogenys
ENSTRUG00000009125	chd9	67	95.489	ENSMEUG00000008222	-	67	95.489	Notamacropus_eugenii
ENSTRUG00000009125	chd9	55	95.489	ENSOPRG00000011168	CHD9	70	95.489	Ochotona_princeps
ENSTRUG00000009125	chd9	73	62.319	ENSODEG00000004466	CHD9	69	75.643	Octodon_degus
ENSTRUG00000009125	chd9	82	85.720	ENSONIG00000002816	chd9	98	84.948	Oreochromis_niloticus
ENSTRUG00000009125	chd9	60	71.485	ENSOANG00000013401	CHD9	55	76.255	Ornithorhynchus_anatinus
ENSTRUG00000009125	chd9	83	69.050	ENSOCUG00000001016	CHD9	66	76.301	Oryctolagus_cuniculus
ENSTRUG00000009125	chd9	97	77.774	ENSORLG00000013810	chd9	99	82.167	Oryzias_latipes
ENSTRUG00000009125	chd9	97	77.629	ENSORLG00020020665	chd9	95	78.499	Oryzias_latipes_hni
ENSTRUG00000009125	chd9	97	76.683	ENSORLG00015019126	chd9	99	83.033	Oryzias_latipes_hsok
ENSTRUG00000009125	chd9	63	79.057	ENSOMEG00000015978	chd9	99	78.961	Oryzias_melastigma
ENSTRUG00000009125	chd9	73	62.387	ENSOARG00000017664	CHD9	86	69.243	Ovis_aries
ENSTRUG00000009125	chd9	81	69.088	ENSPPAG00000039388	-	67	75.153	Pan_paniscus
ENSTRUG00000009125	chd9	73	62.926	ENSPPRG00000004801	CHD9	97	72.143	Panthera_pardus
ENSTRUG00000009125	chd9	73	61.790	ENSPTIG00000021854	CHD9	97	63.214	Panthera_tigris_altaica
ENSTRUG00000009125	chd9	73	62.904	ENSPTRG00000008113	CHD9	97	72.143	Pan_troglodytes
ENSTRUG00000009125	chd9	83	68.894	ENSPANG00000019307	CHD9	97	72.500	Papio_anubis
ENSTRUG00000009125	chd9	95	64.492	ENSPKIG00000025401	-	75	63.772	Paramormyrops_kingsleyae
ENSTRUG00000009125	chd9	96	67.823	ENSPKIG00000021876	chd9	69	81.231	Paramormyrops_kingsleyae
ENSTRUG00000009125	chd9	57	72.868	ENSPSIG00000008099	CHD9	79	78.300	Pelodiscus_sinensis
ENSTRUG00000009125	chd9	88	62.623	ENSPCIG00000017215	CHD9	90	75.527	Phascolarctos_cinereus
ENSTRUG00000009125	chd9	99	77.270	ENSPFOG00000015839	chd9	97	81.004	Poecilia_formosa
ENSTRUG00000009125	chd9	94	80.007	ENSPLAG00000011118	chd9	99	85.494	Poecilia_latipinna
ENSTRUG00000009125	chd9	99	77.952	ENSPREG00000006473	chd9	99	84.262	Poecilia_reticulata
ENSTRUG00000009125	chd9	73	62.858	ENSPPYG00000007348	CHD9	60	76.103	Pongo_abelii
ENSTRUG00000009125	chd9	72	78.747	ENSPCAG00000007564	CHD9	68	80.943	Procavia_capensis
ENSTRUG00000009125	chd9	73	60.874	ENSPCOG00000028433	CHD9	97	72.143	Propithecus_coquereli
ENSTRUG00000009125	chd9	84	58.132	ENSPVAG00000015617	CHD9	65	73.583	Pteropus_vampyrus
ENSTRUG00000009125	chd9	99	80.199	ENSPNYG00000010947	chd9	99	85.333	Pundamilia_nyererei
ENSTRUG00000009125	chd9	99	68.352	ENSPNAG00000024141	chd9	99	75.676	Pygocentrus_nattereri
ENSTRUG00000009125	chd9	89	60.284	ENSRNOG00000049302	Chd9	67	80.642	Rattus_norvegicus
ENSTRUG00000009125	chd9	83	68.975	ENSRBIG00000035553	CHD9	97	72.500	Rhinopithecus_bieti
ENSTRUG00000009125	chd9	81	69.864	ENSRROG00000033278	CHD9	97	72.500	Rhinopithecus_roxellana
ENSTRUG00000009125	chd9	99	60.369	ENSSBOG00000030240	CHD9	97	71.174	Saimiri_boliviensis_boliviensis
ENSTRUG00000009125	chd9	99	65.804	ENSSFOG00015001327	chd9	97	66.140	Scleropages_formosus
ENSTRUG00000009125	chd9	97	68.537	ENSSFOG00015020209	chd9	99	74.939	Scleropages_formosus
ENSTRUG00000009125	chd9	97	84.145	ENSSMAG00000008953	chd9	99	85.438	Scophthalmus_maximus
ENSTRUG00000009125	chd9	99	81.453	ENSSDUG00000006139	chd9	99	86.093	Seriola_dumerili
ENSTRUG00000009125	chd9	99	81.897	ENSSLDG00000017818	chd9	99	86.564	Seriola_lalandi_dorsalis
ENSTRUG00000009125	chd9	70	77.759	ENSSARG00000010632	CHD9	52	77.995	Sorex_araneus
ENSTRUG00000009125	chd9	99	84.383	ENSSPAG00000021649	chd9	99	86.316	Stegastes_partitus
ENSTRUG00000009125	chd9	99	59.524	ENSSSCG00000033591	CHD9	62	75.625	Sus_scrofa
ENSTRUG00000009125	chd9	84	69.320	ENSTGUG00000007476	CHD9	67	76.061	Taeniopygia_guttata
ENSTRUG00000009125	chd9	56	83.810	ENSTNIG00000003825	chd9	57	83.810	Tetraodon_nigroviridis
ENSTRUG00000009125	chd9	52	91.525	ENSTBEG00000016052	-	60	83.333	Tupaia_belangeri
ENSTRUG00000009125	chd9	86	62.420	ENSTTRG00000012674	CHD9	74	75.873	Tursiops_truncatus
ENSTRUG00000009125	chd9	67	85.474	ENSUMAG00000004043	CHD9	95	85.474	Ursus_maritimus
ENSTRUG00000009125	chd9	71	75.573	ENSVPAG00000001374	CHD9	57	75.649	Vicugna_pacos
ENSTRUG00000009125	chd9	73	62.830	ENSVVUG00000019435	CHD9	86	69.177	Vulpes_vulpes
ENSTRUG00000009125	chd9	99	59.268	ENSXETG00000000349	chd9	78	75.000	Xenopus_tropicalis
ENSTRUG00000009125	chd9	83	84.814	ENSXCOG00000012997	chd9	99	85.516	Xiphophorus_couchianus
ENSTRUG00000009125	chd9	99	78.138	ENSXMAG00000016192	chd9	99	85.043	Xiphophorus_maculatus