EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000009202 (Gene tree)
Gene ID: 101066791
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 8789 bases
Position: chr8:279710-288498
Accession: 101066791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000023151	RRM_1	PF00076.22	2.5e-18	1	1
ENSTRUP00000023151	U1snRNP70_N	PF12220.8	8.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000023248	-	2754	XM_003966366	ENSTRUP00000023151	467 (aa)	XP_003966415	H2TEQ8

Gene Model

Click here to download ENSTRUG00000009202's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000009202's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000009202	snrnp70	100	81.876	ENSACIG00000017909	snrnp70	100	82.090	Amphilophus_citrinellus
ENSTRUG00000009202	snrnp70	100	72.421	ENSACLG00000011144	snrnp70	100	71.097	Astatotilapia_calliptera
ENSTRUG00000009202	snrnp70	53	48.031	WBGene00004390	rnp-7	56	50.532	Caenorhabditis_elegans
ENSTRUG00000009202	snrnp70	100	72.399	ENSFHEG00000010298	snrnp70	100	71.762	Fundulus_heteroclitus
ENSTRUG00000009202	snrnp70	100	71.215	ENSGAFG00000003395	snrnp70	100	71.429	Gambusia_affinis
ENSTRUG00000009202	snrnp70	100	74.359	ENSHBUG00000018856	snrnp70	100	81.450	Haplochromis_burtoni
ENSTRUG00000009202	snrnp70	100	81.104	ENSMAMG00000004556	snrnp70	100	77.707	Mastacembelus_armatus
ENSTRUG00000009202	snrnp70	100	73.718	ENSMZEG00005022849	snrnp70	100	79.701	Maylandia_zebra
ENSTRUG00000009202	snrnp70	74	88.696	ENSMALG00000002275	snrnp70	68	88.696	Monopterus_albus
ENSTRUG00000009202	snrnp70	50	88.362	ENSOANG00000005213	SNRNP70	98	90.179	Ornithorhynchus_anatinus
ENSTRUG00000009202	snrnp70	100	75.424	ENSORLG00000017158	snrnp70	100	76.483	Oryzias_latipes
ENSTRUG00000009202	snrnp70	100	75.000	ENSORLG00015010817	snrnp70	100	75.847	Oryzias_latipes_hsok
ENSTRUG00000009202	snrnp70	100	78.419	ENSOMEG00000013002	snrnp70	100	79.060	Oryzias_melastigma
ENSTRUG00000009202	snrnp70	100	73.561	ENSPFOG00000016671	snrnp70	100	73.134	Poecilia_formosa
ENSTRUG00000009202	snrnp70	100	73.348	ENSPLAG00000005912	snrnp70	100	72.921	Poecilia_latipinna
ENSTRUG00000009202	snrnp70	100	73.561	ENSPMEG00000008496	snrnp70	100	73.134	Poecilia_mexicana
ENSTRUG00000009202	snrnp70	100	73.774	ENSPREG00000005486	snrnp70	100	73.348	Poecilia_reticulata
ENSTRUG00000009202	snrnp70	100	74.359	ENSPNYG00000003258	snrnp70	100	81.450	Pundamilia_nyererei
ENSTRUG00000009202	snrnp70	52	86.000	ENSSPUG00000016621	SNRNP70	52	91.892	Sphenodon_punctatus