EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000009243 (Gene tree)
Gene ID: 101071105
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 16294 bases
Position: chr2:9257842-9274135
Accession: 101071105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000023239	RRM_1	PF00076.22	1.7e-08	1	1
ENSTRUP00000023240	RRM_1	PF00076.22	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000023336	SCAF8-202	5865	-	ENSTRUP00000023239	1389 (aa)	-	H2TEZ6
ENSTRUT00000023337	SCAF8-201	6593	XM_003962563	ENSTRUP00000023240	1389 (aa)	XP_003962612	H2TEZ7

Gene Model

Click here to download ENSTRUG00000009243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000009243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000009243	SCAF8	78	67.857	ENSG00000213079	SCAF8	85	67.857	Homo_sapiens
ENSTRUG00000009243	SCAF8	100	77.926	ENSAPOG00000015527	SCAF8	100	78.441	Acanthochromis_polyacanthus
ENSTRUG00000009243	SCAF8	78	66.267	ENSAMEG00000007583	SCAF8	83	66.387	Ailuropoda_melanoleuca
ENSTRUG00000009243	SCAF8	100	77.653	ENSAOCG00000002421	SCAF8	100	78.411	Amphiprion_ocellaris
ENSTRUG00000009243	SCAF8	98	68.646	ENSAPEG00000020115	SCAF8	68	64.899	Amphiprion_percula
ENSTRUG00000009243	SCAF8	78	80.055	ENSATEG00000006959	SCAF8	95	80.092	Anabas_testudineus
ENSTRUG00000009243	SCAF8	78	66.790	ENSAPLG00000005765	SCAF8	85	66.544	Anas_platyrhynchos
ENSTRUG00000009243	SCAF8	78	67.611	ENSANAG00000036184	SCAF8	85	67.611	Aotus_nancymaae
ENSTRUG00000009243	SCAF8	100	76.978	ENSACLG00000018828	SCAF8	100	77.049	Astatotilapia_calliptera
ENSTRUG00000009243	SCAF8	78	67.651	ENSBTAG00000031917	SCAF8	86	67.897	Bos_taurus
ENSTRUG00000009243	SCAF8	78	67.901	ENSCJAG00000012631	SCAF8	83	66.185	Callithrix_jacchus
ENSTRUG00000009243	SCAF8	77	67.750	ENSCAFG00000000570	SCAF8	85	67.875	Canis_familiaris
ENSTRUG00000009243	SCAF8	77	67.750	ENSCAFG00020015048	SCAF8	84	67.875	Canis_lupus_dingo
ENSTRUG00000009243	SCAF8	78	67.774	ENSCHIG00000025041	SCAF8	86	68.020	Capra_hircus
ENSTRUG00000009243	SCAF8	78	67.658	ENSTSYG00000010991	SCAF8	83	67.658	Carlito_syrichta
ENSTRUG00000009243	SCAF8	54	70.667	ENSCAPG00000003300	SCAF8	71	70.667	Cavia_aperea
ENSTRUG00000009243	SCAF8	78	50.334	ENSCPOG00000030311	-	59	41.997	Cavia_porcellus
ENSTRUG00000009243	SCAF8	77	56.328	ENSCPOG00000022216	-	86	55.707	Cavia_porcellus
ENSTRUG00000009243	SCAF8	78	67.611	ENSCCAG00000024952	SCAF8	85	67.857	Cebus_capucinus
ENSTRUG00000009243	SCAF8	78	67.857	ENSCATG00000035361	SCAF8	85	67.857	Cercocebus_atys
ENSTRUG00000009243	SCAF8	78	66.178	ENSCLAG00000004910	SCAF8	86	66.667	Chinchilla_lanigera
ENSTRUG00000009243	SCAF8	78	66.146	ENSCSAG00000013430	SCAF8	86	66.146	Chlorocebus_sabaeus
ENSTRUG00000009243	SCAF8	78	68.480	ENSCPBG00000016330	SCAF8	81	68.480	Chrysemys_picta_bellii
ENSTRUG00000009243	SCAF8	78	68.187	ENSCANG00000039499	SCAF8	85	68.040	Colobus_angolensis_palliatus
ENSTRUG00000009243	SCAF8	76	70.588	ENSCGRG00001020167	Scaf8	82	70.588	Cricetulus_griseus_chok1gshd
ENSTRUG00000009243	SCAF8	75	70.277	ENSCGRG00000004120	Scaf8	82	70.277	Cricetulus_griseus_crigri
ENSTRUG00000009243	SCAF8	100	74.982	ENSCSEG00000000043	-	100	74.257	Cynoglossus_semilaevis
ENSTRUG00000009243	SCAF8	96	69.588	ENSCVAG00000000925	SCAF8	99	68.773	Cyprinodon_variegatus
ENSTRUG00000009243	SCAF8	74	64.583	ENSDNOG00000025271	SCAF8	85	64.729	Dasypus_novemcinctus
ENSTRUG00000009243	SCAF8	77	67.826	ENSDORG00000006391	Scaf8	86	67.702	Dipodomys_ordii
ENSTRUG00000009243	SCAF8	78	67.448	ENSEASG00005018879	SCAF8	86	67.818	Equus_asinus_asinus
ENSTRUG00000009243	SCAF8	78	67.778	ENSECAG00000005540	SCAF8	86	68.025	Equus_caballus
ENSTRUG00000009243	SCAF8	76	71.107	ENSELUG00000002779	SCAF8	100	60.540	Esox_lucius
ENSTRUG00000009243	SCAF8	78	68.742	ENSFCAG00000023424	SCAF8	85	68.519	Felis_catus
ENSTRUG00000009243	SCAF8	75	68.353	ENSFALG00000012433	SCAF8	85	66.914	Ficedula_albicollis
ENSTRUG00000009243	SCAF8	78	66.914	ENSFDAG00000010335	SCAF8	85	66.914	Fukomys_damarensis
ENSTRUG00000009243	SCAF8	100	72.116	ENSFHEG00000008284	SCAF8	100	71.890	Fundulus_heteroclitus
ENSTRUG00000009243	SCAF8	65	76.226	ENSGMOG00000018812	SCAF8	83	75.906	Gadus_morhua
ENSTRUG00000009243	SCAF8	77	66.156	ENSGALG00000013635	SCAF8	87	65.684	Gallus_gallus
ENSTRUG00000009243	SCAF8	100	70.551	ENSGAFG00000018033	SCAF8	100	70.807	Gambusia_affinis
ENSTRUG00000009243	SCAF8	80	75.344	ENSGACG00000006909	SCAF8	100	75.515	Gasterosteus_aculeatus
ENSTRUG00000009243	SCAF8	78	67.857	ENSGGOG00000008645	SCAF8	85	67.857	Gorilla_gorilla
ENSTRUG00000009243	SCAF8	100	76.907	ENSHBUG00000019537	SCAF8	100	77.120	Haplochromis_burtoni
ENSTRUG00000009243	SCAF8	78	67.407	ENSHGLG00000003619	SCAF8	86	67.407	Heterocephalus_glaber_female
ENSTRUG00000009243	SCAF8	77	67.250	ENSHGLG00100004708	SCAF8	86	67.250	Heterocephalus_glaber_male
ENSTRUG00000009243	SCAF8	77	67.625	ENSSTOG00000026043	SCAF8	85	67.625	Ictidomys_tridecemlineatus
ENSTRUG00000009243	SCAF8	76	67.037	ENSJJAG00000020480	Scaf8	84	67.284	Jaculus_jaculus
ENSTRUG00000009243	SCAF8	100	74.768	ENSKMAG00000012767	SCAF8	100	74.715	Kryptolebias_marmoratus
ENSTRUG00000009243	SCAF8	86	94.403	ENSLBEG00000012484	-	93	90.000	Labrus_bergylta
ENSTRUG00000009243	SCAF8	78	59.875	ENSLACG00000001394	SCAF8	99	59.173	Latimeria_chalumnae
ENSTRUG00000009243	SCAF8	78	63.944	ENSLOCG00000016856	SCAF8	92	64.011	Lepisosteus_oculatus
ENSTRUG00000009243	SCAF8	78	67.518	ENSLAFG00000000022	SCAF8	87	67.636	Loxodonta_africana
ENSTRUG00000009243	SCAF8	78	67.857	ENSMFAG00000032738	SCAF8	85	67.857	Macaca_fascicularis
ENSTRUG00000009243	SCAF8	78	67.857	ENSMMUG00000015163	SCAF8	85	67.857	Macaca_mulatta
ENSTRUG00000009243	SCAF8	78	67.857	ENSMNEG00000043466	SCAF8	85	67.857	Macaca_nemestrina
ENSTRUG00000009243	SCAF8	77	67.706	ENSMLEG00000034845	SCAF8	85	67.706	Mandrillus_leucophaeus
ENSTRUG00000009243	SCAF8	97	74.050	ENSMAMG00000009457	SCAF8	100	74.236	Mastacembelus_armatus
ENSTRUG00000009243	SCAF8	100	76.907	ENSMZEG00005005698	SCAF8	100	76.978	Maylandia_zebra
ENSTRUG00000009243	SCAF8	77	67.778	ENSMGAG00000012762	SCAF8	85	67.284	Meleagris_gallopavo
ENSTRUG00000009243	SCAF8	77	67.625	ENSMAUG00000009513	Scaf8	85	67.625	Mesocricetus_auratus
ENSTRUG00000009243	SCAF8	78	68.025	ENSMICG00000028965	SCAF8	85	68.148	Microcebus_murinus
ENSTRUG00000009243	SCAF8	76	70.327	ENSMOCG00000014950	Scaf8	82	70.327	Microtus_ochrogaster
ENSTRUG00000009243	SCAF8	98	76.573	ENSMMOG00000002216	SCAF8	99	75.933	Mola_mola
ENSTRUG00000009243	SCAF8	77	68.789	ENSMODG00000008301	SCAF8	85	68.789	Monodelphis_domestica
ENSTRUG00000009243	SCAF8	100	77.353	ENSMALG00000011584	SCAF8	100	78.202	Monopterus_albus
ENSTRUG00000009243	SCAF8	78	69.935	MGP_CAROLIEiJ_G0021016	Scaf8	82	70.196	Mus_caroli
ENSTRUG00000009243	SCAF8	78	69.935	ENSMUSG00000046201	Scaf8	82	70.196	Mus_musculus
ENSTRUG00000009243	SCAF8	76	70.458	MGP_PahariEiJ_G0023334	Scaf8	82	70.719	Mus_pahari
ENSTRUG00000009243	SCAF8	78	66.065	ENSMPUG00000001974	SCAF8	86	66.185	Mustela_putorius_furo
ENSTRUG00000009243	SCAF8	77	67.407	ENSMLUG00000029190	SCAF8	84	67.654	Myotis_lucifugus
ENSTRUG00000009243	SCAF8	75	70.850	ENSNGAG00000012332	Scaf8	82	71.111	Nannospalax_galili
ENSTRUG00000009243	SCAF8	85	77.758	ENSNBRG00000009067	SCAF8	99	77.971	Neolamprologus_brichardi
ENSTRUG00000009243	SCAF8	78	66.258	ENSNLEG00000015509	SCAF8	85	66.047	Nomascus_leucogenys
ENSTRUG00000009243	SCAF8	56	76.289	ENSOPRG00000018413	-	69	76.289	Ochotona_princeps
ENSTRUG00000009243	SCAF8	78	67.571	ENSODEG00000007296	SCAF8	85	67.571	Octodon_degus
ENSTRUG00000009243	SCAF8	77	81.515	ENSONIG00000008119	SCAF8	93	80.052	Oreochromis_niloticus
ENSTRUG00000009243	SCAF8	77	68.000	ENSOCUG00000026063	SCAF8	85	68.125	Oryctolagus_cuniculus
ENSTRUG00000009243	SCAF8	100	72.818	ENSORLG00000017358	SCAF8	100	73.777	Oryzias_latipes
ENSTRUG00000009243	SCAF8	100	73.314	ENSORLG00020002214	SCAF8	100	73.352	Oryzias_latipes_hni
ENSTRUG00000009243	SCAF8	100	73.121	ENSORLG00015015779	SCAF8	100	73.956	Oryzias_latipes_hsok
ENSTRUG00000009243	SCAF8	100	74.239	ENSOMEG00000015471	SCAF8	100	74.965	Oryzias_melastigma
ENSTRUG00000009243	SCAF8	78	65.704	ENSOGAG00000034223	SCAF8	83	65.704	Otolemur_garnettii
ENSTRUG00000009243	SCAF8	77	67.413	ENSOARG00000004159	SCAF8	86	67.662	Ovis_aries
ENSTRUG00000009243	SCAF8	78	67.857	ENSPPAG00000039826	SCAF8	85	67.857	Pan_paniscus
ENSTRUG00000009243	SCAF8	78	68.519	ENSPPRG00000023175	SCAF8	85	68.642	Panthera_pardus
ENSTRUG00000009243	SCAF8	77	68.375	ENSPTIG00000014836	SCAF8	85	68.500	Panthera_tigris_altaica
ENSTRUG00000009243	SCAF8	78	67.857	ENSPTRG00000018727	SCAF8	85	67.857	Pan_troglodytes
ENSTRUG00000009243	SCAF8	78	67.857	ENSPANG00000017489	SCAF8	85	65.025	Papio_anubis
ENSTRUG00000009243	SCAF8	78	71.377	ENSPKIG00000021212	SCAF8	93	71.317	Paramormyrops_kingsleyae
ENSTRUG00000009243	SCAF8	68	63.459	ENSPSIG00000008614	SCAF8	70	63.759	Pelodiscus_sinensis
ENSTRUG00000009243	SCAF8	77	65.077	ENSPEMG00000010531	Scaf8	88	65.077	Peromyscus_maniculatus_bairdii
ENSTRUG00000009243	SCAF8	78	68.927	ENSPCIG00000001141	SCAF8	85	68.927	Phascolarctos_cinereus
ENSTRUG00000009243	SCAF8	100	71.813	ENSPFOG00000004176	SCAF8	89	85.879	Poecilia_formosa
ENSTRUG00000009243	SCAF8	100	71.884	ENSPLAG00000021432	SCAF8	100	72.933	Poecilia_latipinna
ENSTRUG00000009243	SCAF8	100	71.580	ENSPMEG00000007591	SCAF8	100	72.516	Poecilia_mexicana
ENSTRUG00000009243	SCAF8	100	71.510	ENSPREG00000000652	SCAF8	100	72.370	Poecilia_reticulata
ENSTRUG00000009243	SCAF8	78	66.830	ENSPPYG00000017121	SCAF8	85	66.462	Pongo_abelii
ENSTRUG00000009243	SCAF8	64	79.800	ENSPCAG00000013044	SCAF8	74	79.633	Procavia_capensis
ENSTRUG00000009243	SCAF8	78	67.901	ENSPCOG00000002067	SCAF8	84	67.706	Propithecus_coquereli
ENSTRUG00000009243	SCAF8	78	68.069	ENSPVAG00000005582	SCAF8	87	67.698	Pteropus_vampyrus
ENSTRUG00000009243	SCAF8	100	77.049	ENSPNYG00000007277	SCAF8	100	77.120	Pundamilia_nyererei
ENSTRUG00000009243	SCAF8	81	68.936	ENSPNAG00000024740	SCAF8	83	70.211	Pygocentrus_nattereri
ENSTRUG00000009243	SCAF8	76	70.065	ENSRNOG00000016919	Scaf8	82	70.327	Rattus_norvegicus
ENSTRUG00000009243	SCAF8	78	68.187	ENSRBIG00000035769	SCAF8	85	68.187	Rhinopithecus_bieti
ENSTRUG00000009243	SCAF8	78	68.187	ENSRROG00000013580	SCAF8	85	68.187	Rhinopithecus_roxellana
ENSTRUG00000009243	SCAF8	78	67.488	ENSSBOG00000027023	SCAF8	85	67.488	Saimiri_boliviensis_boliviensis
ENSTRUG00000009243	SCAF8	78	68.480	ENSSHAG00000009915	SCAF8	86	69.012	Sarcophilus_harrisii
ENSTRUG00000009243	SCAF8	77	63.990	ENSSFOG00015009481	SCAF8	57	56.828	Scleropages_formosus
ENSTRUG00000009243	SCAF8	76	83.691	ENSSMAG00000008275	SCAF8	100	76.849	Scophthalmus_maximus
ENSTRUG00000009243	SCAF8	78	68.114	ENSSPUG00000015219	SCAF8	82	68.238	Sphenodon_punctatus
ENSTRUG00000009243	SCAF8	78	68.025	ENSSSCG00000004070	SCAF8	86	68.272	Sus_scrofa
ENSTRUG00000009243	SCAF8	77	67.001	ENSTGUG00000011151	SCAF8	85	67.252	Taeniopygia_guttata
ENSTRUG00000009243	SCAF8	78	88.767	ENSTNIG00000016885	SCAF8	99	88.278	Tetraodon_nigroviridis
ENSTRUG00000009243	SCAF8	77	66.750	ENSTTRG00000014538	SCAF8	86	66.125	Tursiops_truncatus
ENSTRUG00000009243	SCAF8	78	68.143	ENSUAMG00000024736	SCAF8	85	67.950	Ursus_americanus
ENSTRUG00000009243	SCAF8	76	67.513	ENSUMAG00000013404	SCAF8	85	67.640	Ursus_maritimus
ENSTRUG00000009243	SCAF8	77	67.750	ENSVVUG00000007532	SCAF8	86	67.389	Vulpes_vulpes
ENSTRUG00000009243	SCAF8	71	69.120	ENSXETG00000013132	scaf8	77	68.195	Xenopus_tropicalis
ENSTRUG00000009243	SCAF8	100	70.638	ENSXMAG00000019192	SCAF8	100	71.975	Xiphophorus_maculatus