EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000009244 (Gene tree)
Gene ID: 101066204
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 8729 bases
Position: chr11:4897995-4906723
Accession: 101066204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000023241	GTP_EFTU	PF00009.27	2.8e-63	1	1
ENSTRUP00000048649	GTP_EFTU	PF00009.27	2.9e-63	1	1
ENSTRUP00000048794	GTP_EFTU	PF00009.27	3.5e-63	1	1
ENSTRUP00000023241	GTP_EFTU_D2	PF03144.25	3.5e-16	1	1
ENSTRUP00000048794	GTP_EFTU_D2	PF03144.25	3.6e-16	1	1
ENSTRUP00000048649	GTP_EFTU_D2	PF03144.25	3.7e-16	1	1
ENSTRUP00000023241	EFG_IV	PF03764.18	1.4e-37	1	1
ENSTRUP00000048794	EFG_IV	PF03764.18	1.6e-37	1	1
ENSTRUP00000048649	EFG_IV	PF03764.18	3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000023338	-	3839	XM_003968412	ENSTRUP00000023241	748 (aa)	XP_003968461	H2TEZ8
ENSTRUT00000053875	-	3963	-	ENSTRUP00000048794	834 (aa)	-	-
ENSTRUT00000058421	-	4104	-	ENSTRUP00000048649	749 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000009244's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000009244's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000009244	gfm1	77	32.995	ENSTRUG00000017921	-	66	38.926
ENSTRUG00000009244	gfm1	95	33.113	ENSTRUG00000018513	gfm2	96	33.641

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000009244	gfm1	97	80.028	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSTRUG00000009244	gfm1	97	82.897	ENSAPOG00000016489	gfm1	99	85.817	Acanthochromis_polyacanthus
ENSTRUG00000009244	gfm1	98	78.969	ENSAMEG00000013542	GFM1	100	77.822	Ailuropoda_melanoleuca
ENSTRUG00000009244	gfm1	97	83.310	ENSACIG00000014465	gfm1	94	83.310	Amphilophus_citrinellus
ENSTRUG00000009244	gfm1	100	87.166	ENSAOCG00000006023	gfm1	100	87.166	Amphiprion_ocellaris
ENSTRUG00000009244	gfm1	100	87.032	ENSAPEG00000024499	gfm1	100	87.032	Amphiprion_percula
ENSTRUG00000009244	gfm1	100	88.235	ENSATEG00000013789	gfm1	100	88.235	Anabas_testudineus
ENSTRUG00000009244	gfm1	97	78.897	ENSAPLG00000005022	GFM1	100	78.897	Anas_platyrhynchos
ENSTRUG00000009244	gfm1	97	80.138	ENSACAG00000006829	GFM1	98	80.138	Anolis_carolinensis
ENSTRUG00000009244	gfm1	97	79.614	ENSANAG00000035983	GFM1	97	79.614	Aotus_nancymaae
ENSTRUG00000009244	gfm1	100	87.701	ENSACLG00000016586	gfm1	100	87.701	Astatotilapia_calliptera
ENSTRUG00000009244	gfm1	100	82.400	ENSAMXG00000013435	gfm1	99	82.950	Astyanax_mexicanus
ENSTRUG00000009244	gfm1	96	80.501	ENSBTAG00000027795	GFM1	95	80.501	Bos_taurus
ENSTRUG00000009244	gfm1	94	57.917	WBGene00009246	gfm-1	95	57.584	Caenorhabditis_elegans
ENSTRUG00000009244	gfm1	100	77.822	ENSCJAG00000000363	GFM1	100	77.822	Callithrix_jacchus
ENSTRUG00000009244	gfm1	96	80.362	ENSCAFG00000009006	GFM1	100	80.030	Canis_familiaris
ENSTRUG00000009244	gfm1	96	80.362	ENSCAFG00020005878	GFM1	98	80.362	Canis_lupus_dingo
ENSTRUG00000009244	gfm1	99	78.755	ENSCHIG00000015220	GFM1	100	77.955	Capra_hircus
ENSTRUG00000009244	gfm1	97	79.614	ENSTSYG00000002013	GFM1	96	79.614	Carlito_syrichta
ENSTRUG00000009244	gfm1	96	70.580	ENSCAPG00000005699	GFM1	97	70.580	Cavia_aperea
ENSTRUG00000009244	gfm1	100	78.515	ENSCPOG00000001194	GFM1	100	78.515	Cavia_porcellus
ENSTRUG00000009244	gfm1	99	77.674	ENSCCAG00000025561	GFM1	99	77.674	Cebus_capucinus
ENSTRUG00000009244	gfm1	97	80.165	ENSCATG00000037622	GFM1	97	80.165	Cercocebus_atys
ENSTRUG00000009244	gfm1	97	79.614	ENSCLAG00000002503	GFM1	96	79.614	Chinchilla_lanigera
ENSTRUG00000009244	gfm1	97	80.165	ENSCSAG00000012162	GFM1	97	80.165	Chlorocebus_sabaeus
ENSTRUG00000009244	gfm1	100	69.231	ENSCHOG00000004867	GFM1	100	69.231	Choloepus_hoffmanni
ENSTRUG00000009244	gfm1	100	77.941	ENSCPBG00000018367	GFM1	99	77.941	Chrysemys_picta_bellii
ENSTRUG00000009244	gfm1	94	59.441	ENSCING00000011960	-	93	59.441	Ciona_intestinalis
ENSTRUG00000009244	gfm1	94	60.938	ENSCSAVG00000008514	-	99	59.972	Ciona_savignyi
ENSTRUG00000009244	gfm1	97	80.303	ENSCANG00000031714	GFM1	97	80.303	Colobus_angolensis_palliatus
ENSTRUG00000009244	gfm1	100	77.763	ENSCGRG00001022095	GFM1	100	77.763	Cricetulus_griseus_chok1gshd
ENSTRUG00000009244	gfm1	100	77.763	ENSCGRG00000012043	GFM1	100	77.763	Cricetulus_griseus_crigri
ENSTRUG00000009244	gfm1	97	81.604	ENSCSEG00000017088	gfm1	99	81.604	Cynoglossus_semilaevis
ENSTRUG00000009244	gfm1	100	87.968	ENSCVAG00000004126	gfm1	100	87.968	Cyprinodon_variegatus
ENSTRUG00000009244	gfm1	100	81.150	ENSDARG00000063624	gfm1	100	81.150	Danio_rerio
ENSTRUG00000009244	gfm1	55	78.729	ENSDNOG00000016385	-	100	78.729	Dasypus_novemcinctus
ENSTRUG00000009244	gfm1	100	76.729	ENSDORG00000014165	Gfm1	100	76.729	Dipodomys_ordii
ENSTRUG00000009244	gfm1	95	68.265	FBgn0263133	mEFG1	95	68.265	Drosophila_melanogaster
ENSTRUG00000009244	gfm1	96	72.538	ENSETEG00000019197	GFM1	95	72.538	Echinops_telfairi
ENSTRUG00000009244	gfm1	90	63.259	ENSEBUG00000012794	gfm1	100	63.259	Eptatretus_burgeri
ENSTRUG00000009244	gfm1	96	60.000	ENSEEUG00000000429	GFM1	99	60.000	Erinaceus_europaeus
ENSTRUG00000009244	gfm1	100	82.754	ENSELUG00000014728	gfm1	100	82.754	Esox_lucius
ENSTRUG00000009244	gfm1	99	78.784	ENSFCAG00000013291	GFM1	100	77.851	Felis_catus
ENSTRUG00000009244	gfm1	90	78.519	ENSFALG00000007619	GFM1	100	78.519	Ficedula_albicollis
ENSTRUG00000009244	gfm1	100	78.249	ENSFDAG00000016559	GFM1	100	78.249	Fukomys_damarensis
ENSTRUG00000009244	gfm1	100	87.968	ENSFHEG00000006091	gfm1	100	87.968	Fundulus_heteroclitus
ENSTRUG00000009244	gfm1	97	85.420	ENSGMOG00000010161	gfm1	100	85.420	Gadus_morhua
ENSTRUG00000009244	gfm1	98	78.415	ENSGALG00000009634	GFM1	99	78.415	Gallus_gallus
ENSTRUG00000009244	gfm1	100	87.968	ENSGAFG00000012527	gfm1	100	87.968	Gambusia_affinis
ENSTRUG00000009244	gfm1	100	87.717	ENSGACG00000009864	gfm1	100	87.717	Gasterosteus_aculeatus
ENSTRUG00000009244	gfm1	97	80.028	ENSGGOG00000003085	GFM1	97	80.028	Gorilla_gorilla
ENSTRUG00000009244	gfm1	100	87.834	ENSHBUG00000002120	gfm1	100	87.834	Haplochromis_burtoni
ENSTRUG00000009244	gfm1	97	79.339	ENSHGLG00000016855	GFM1	100	77.321	Heterocephalus_glaber_female
ENSTRUG00000009244	gfm1	97	79.339	ENSHGLG00100013049	GFM1	100	77.321	Heterocephalus_glaber_male
ENSTRUG00000009244	gfm1	100	86.631	ENSHCOG00000007638	gfm1	100	86.631	Hippocampus_comes
ENSTRUG00000009244	gfm1	100	83.690	ENSIPUG00000005873	gfm1	100	83.690	Ictalurus_punctatus
ENSTRUG00000009244	gfm1	97	78.650	ENSSTOG00000010150	GFM1	98	78.650	Ictidomys_tridecemlineatus
ENSTRUG00000009244	gfm1	100	76.964	ENSJJAG00000016447	Gfm1	100	76.964	Jaculus_jaculus
ENSTRUG00000009244	gfm1	100	83.957	ENSKMAG00000020768	gfm1	100	83.957	Kryptolebias_marmoratus
ENSTRUG00000009244	gfm1	94	87.304	ENSLBEG00000021315	gfm1	100	87.304	Labrus_bergylta
ENSTRUG00000009244	gfm1	100	80.481	ENSLACG00000012295	GFM1	100	80.481	Latimeria_chalumnae
ENSTRUG00000009244	gfm1	97	78.984	ENSLOCG00000003778	gfm1	99	78.984	Lepisosteus_oculatus
ENSTRUG00000009244	gfm1	96	79.861	ENSLAFG00000010945	GFM1	99	78.611	Loxodonta_africana
ENSTRUG00000009244	gfm1	100	78.296	ENSMFAG00000035731	GFM1	100	78.296	Macaca_fascicularis
ENSTRUG00000009244	gfm1	100	78.296	ENSMMUG00000004961	GFM1	100	78.296	Macaca_mulatta
ENSTRUG00000009244	gfm1	97	80.028	ENSMNEG00000033245	GFM1	97	80.028	Macaca_nemestrina
ENSTRUG00000009244	gfm1	97	78.345	ENSMLEG00000030908	GFM1	99	78.378	Mandrillus_leucophaeus
ENSTRUG00000009244	gfm1	100	87.032	ENSMAMG00000011760	gfm1	100	87.032	Mastacembelus_armatus
ENSTRUG00000009244	gfm1	100	87.834	ENSMZEG00005016639	gfm1	100	87.834	Maylandia_zebra
ENSTRUG00000009244	gfm1	98	78.308	ENSMGAG00000010641	GFM1	98	78.308	Meleagris_gallopavo
ENSTRUG00000009244	gfm1	100	77.763	ENSMAUG00000000611	Gfm1	100	77.763	Mesocricetus_auratus
ENSTRUG00000009244	gfm1	97	80.303	ENSMICG00000049086	GFM1	96	80.303	Microcebus_murinus
ENSTRUG00000009244	gfm1	100	78.029	ENSMOCG00000000465	Gfm1	100	78.029	Microtus_ochrogaster
ENSTRUG00000009244	gfm1	97	90.470	ENSMMOG00000012538	gfm1	98	90.470	Mola_mola
ENSTRUG00000009244	gfm1	97	79.724	ENSMODG00000015673	GFM1	98	79.724	Monodelphis_domestica
ENSTRUG00000009244	gfm1	99	84.303	ENSMALG00000012508	gfm1	98	84.303	Monopterus_albus
ENSTRUG00000009244	gfm1	100	77.763	MGP_CAROLIEiJ_G0025052	Gfm1	100	78.277	Mus_caroli
ENSTRUG00000009244	gfm1	100	77.763	ENSMUSG00000027774	Gfm1	100	77.763	Mus_musculus
ENSTRUG00000009244	gfm1	100	77.896	MGP_PahariEiJ_G0026495	Gfm1	100	78.277	Mus_pahari
ENSTRUG00000009244	gfm1	100	77.763	MGP_SPRETEiJ_G0025994	Gfm1	100	78.277	Mus_spretus
ENSTRUG00000009244	gfm1	99	78.389	ENSMPUG00000002859	GFM1	99	78.389	Mustela_putorius_furo
ENSTRUG00000009244	gfm1	97	80.441	ENSMLUG00000000452	GFM1	96	80.441	Myotis_lucifugus
ENSTRUG00000009244	gfm1	100	76.933	ENSNGAG00000012375	Gfm1	100	76.933	Nannospalax_galili
ENSTRUG00000009244	gfm1	97	88.599	ENSNBRG00000004631	gfm1	99	88.599	Neolamprologus_brichardi
ENSTRUG00000009244	gfm1	97	80.028	ENSNLEG00000004176	GFM1	97	80.028	Nomascus_leucogenys
ENSTRUG00000009244	gfm1	91	71.471	ENSMEUG00000007784	GFM1	99	71.598	Notamacropus_eugenii
ENSTRUG00000009244	gfm1	100	76.769	ENSOPRG00000009860	GFM1	100	76.769	Ochotona_princeps
ENSTRUG00000009244	gfm1	97	79.890	ENSODEG00000004316	GFM1	100	77.984	Octodon_degus
ENSTRUG00000009244	gfm1	100	88.102	ENSONIG00000003772	gfm1	100	88.102	Oreochromis_niloticus
ENSTRUG00000009244	gfm1	99	78.841	ENSOCUG00000013561	GFM1	99	78.581	Oryctolagus_cuniculus
ENSTRUG00000009244	gfm1	95	87.288	ENSORLG00000006487	gfm1	100	87.288	Oryzias_latipes
ENSTRUG00000009244	gfm1	100	86.230	ENSORLG00020003362	gfm1	100	86.230	Oryzias_latipes_hni
ENSTRUG00000009244	gfm1	100	85.695	ENSORLG00015005829	gfm1	100	85.695	Oryzias_latipes_hsok
ENSTRUG00000009244	gfm1	100	86.497	ENSOMEG00000012894	gfm1	100	86.497	Oryzias_melastigma
ENSTRUG00000009244	gfm1	100	77.249	ENSOGAG00000008298	GFM1	100	77.249	Otolemur_garnettii
ENSTRUG00000009244	gfm1	96	79.612	ENSOARG00000002409	GFM1	99	79.612	Ovis_aries
ENSTRUG00000009244	gfm1	97	80.028	ENSPPAG00000033881	GFM1	97	80.028	Pan_paniscus
ENSTRUG00000009244	gfm1	99	78.784	ENSPPRG00000009281	GFM1	98	78.784	Panthera_pardus
ENSTRUG00000009244	gfm1	99	78.649	ENSPTIG00000012416	GFM1	98	78.649	Panthera_tigris_altaica
ENSTRUG00000009244	gfm1	97	80.028	ENSPTRG00000015570	GFM1	97	80.028	Pan_troglodytes
ENSTRUG00000009244	gfm1	97	80.165	ENSPANG00000016512	GFM1	97	80.165	Papio_anubis
ENSTRUG00000009244	gfm1	100	82.086	ENSPKIG00000004876	gfm1	100	82.086	Paramormyrops_kingsleyae
ENSTRUG00000009244	gfm1	100	78.877	ENSPSIG00000012567	GFM1	99	78.877	Pelodiscus_sinensis
ENSTRUG00000009244	gfm1	97	83.724	ENSPMGG00000014068	gfm1	100	83.724	Periophthalmus_magnuspinnatus
ENSTRUG00000009244	gfm1	100	77.763	ENSPEMG00000008942	Gfm1	100	77.763	Peromyscus_maniculatus_bairdii
ENSTRUG00000009244	gfm1	86	76.094	ENSPCIG00000020195	GFM1	97	77.974	Phascolarctos_cinereus
ENSTRUG00000009244	gfm1	100	88.770	ENSPFOG00000011022	gfm1	100	88.770	Poecilia_formosa
ENSTRUG00000009244	gfm1	97	89.779	ENSPLAG00000019585	gfm1	100	88.062	Poecilia_latipinna
ENSTRUG00000009244	gfm1	100	88.636	ENSPMEG00000012376	gfm1	100	88.636	Poecilia_mexicana
ENSTRUG00000009244	gfm1	100	88.369	ENSPREG00000001332	gfm1	95	88.369	Poecilia_reticulata
ENSTRUG00000009244	gfm1	97	80.028	ENSPPYG00000014244	GFM1	97	80.028	Pongo_abelii
ENSTRUG00000009244	gfm1	94	78.947	ENSPCAG00000008934	GFM1	100	78.947	Procavia_capensis
ENSTRUG00000009244	gfm1	97	79.589	ENSPCOG00000022259	GFM1	98	78.784	Propithecus_coquereli
ENSTRUG00000009244	gfm1	99	77.973	ENSPVAG00000013605	GFM1	100	76.852	Pteropus_vampyrus
ENSTRUG00000009244	gfm1	100	87.567	ENSPNYG00000006037	gfm1	100	87.567	Pundamilia_nyererei
ENSTRUG00000009244	gfm1	100	83.021	ENSPNAG00000001237	gfm1	100	83.021	Pygocentrus_nattereri
ENSTRUG00000009244	gfm1	100	77.497	ENSRNOG00000012873	Gfm1	100	77.497	Rattus_norvegicus
ENSTRUG00000009244	gfm1	97	80.441	ENSRBIG00000031363	GFM1	97	80.441	Rhinopithecus_bieti
ENSTRUG00000009244	gfm1	97	80.303	ENSRROG00000031081	GFM1	97	80.303	Rhinopithecus_roxellana
ENSTRUG00000009244	gfm1	96	54.883	YLR069C	-	94	54.883	Saccharomyces_cerevisiae
ENSTRUG00000009244	gfm1	97	79.614	ENSSBOG00000023252	GFM1	97	79.614	Saimiri_boliviensis_boliviensis
ENSTRUG00000009244	gfm1	98	80.191	ENSSHAG00000017772	GFM1	98	80.191	Sarcophilus_harrisii
ENSTRUG00000009244	gfm1	100	81.842	ENSSFOG00015003117	gfm1	100	81.842	Scleropages_formosus
ENSTRUG00000009244	gfm1	100	87.433	ENSSMAG00000013221	gfm1	100	87.433	Scophthalmus_maximus
ENSTRUG00000009244	gfm1	100	88.102	ENSSDUG00000018665	gfm1	100	88.102	Seriola_dumerili
ENSTRUG00000009244	gfm1	100	87.968	ENSSLDG00000020606	gfm1	100	87.968	Seriola_lalandi_dorsalis
ENSTRUG00000009244	gfm1	97	78.069	ENSSPUG00000018686	GFM1	98	78.069	Sphenodon_punctatus
ENSTRUG00000009244	gfm1	100	88.636	ENSSPAG00000008800	gfm1	100	88.636	Stegastes_partitus
ENSTRUG00000009244	gfm1	96	79.387	ENSSSCG00000025651	GFM1	95	79.387	Sus_scrofa
ENSTRUG00000009244	gfm1	100	91.444	ENSTNIG00000007729	gfm1	100	91.444	Tetraodon_nigroviridis
ENSTRUG00000009244	gfm1	90	71.259	ENSTBEG00000017404	GFM1	89	71.259	Tupaia_belangeri
ENSTRUG00000009244	gfm1	96	80.223	ENSTTRG00000001735	GFM1	100	77.015	Tursiops_truncatus
ENSTRUG00000009244	gfm1	99	78.649	ENSUAMG00000026381	GFM1	98	78.649	Ursus_americanus
ENSTRUG00000009244	gfm1	99	78.649	ENSUMAG00000011268	GFM1	98	78.649	Ursus_maritimus
ENSTRUG00000009244	gfm1	99	75.101	ENSVPAG00000009444	GFM1	98	75.101	Vicugna_pacos
ENSTRUG00000009244	gfm1	96	80.168	ENSVVUG00000020091	GFM1	100	79.734	Vulpes_vulpes
ENSTRUG00000009244	gfm1	100	79.787	ENSXETG00000032551	GFM1	100	79.787	Xenopus_tropicalis
ENSTRUG00000009244	gfm1	54	85.012	ENSXCOG00000012590	gfm1	94	85.012	Xiphophorus_couchianus
ENSTRUG00000009244	gfm1	100	87.834	ENSXMAG00000000261	gfm1	100	87.834	Xiphophorus_maculatus