EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000009372 (Gene tree)
Gene ID: 101062847
Gene Symbol: urb1
Alias: mp:zf637-1-000544|zf637-1-000544
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 11660 bases
Position: chr11:7984807-7996466
Accession: 101062847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000023566	Npa1	PF11707.8	1.1e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000023664	-	7319	XM_011608602	ENSTRUP00000023566	2243 (aa)	XP_011606904	H2TFW8

Gene Model

Click here to download ENSTRUG00000009372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000009372's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000009372	urb1	98	44.444	ENSG00000142207	URB1	99	44.328	Homo_sapiens
ENSTRUG00000009372	urb1	100	67.818	ENSAPOG00000020308	urb1	100	67.818	Acanthochromis_polyacanthus
ENSTRUG00000009372	urb1	99	43.088	ENSAMEG00000011998	URB1	99	43.431	Ailuropoda_melanoleuca
ENSTRUG00000009372	urb1	95	64.588	ENSACIG00000003248	urb1	97	64.588	Amphilophus_citrinellus
ENSTRUG00000009372	urb1	100	62.511	ENSAOCG00000010364	urb1	100	62.511	Amphiprion_ocellaris
ENSTRUG00000009372	urb1	97	73.376	ENSAPEG00000010758	urb1	99	73.376	Amphiprion_percula
ENSTRUG00000009372	urb1	100	69.913	ENSATEG00000011790	urb1	100	69.913	Anabas_testudineus
ENSTRUG00000009372	urb1	97	45.717	ENSAPLG00000012791	URB1	99	45.946	Anas_platyrhynchos
ENSTRUG00000009372	urb1	99	44.012	ENSACAG00000002817	URB1	98	44.012	Anolis_carolinensis
ENSTRUG00000009372	urb1	99	44.332	ENSANAG00000024617	URB1	99	44.178	Aotus_nancymaae
ENSTRUG00000009372	urb1	100	68.850	ENSACLG00000024865	urb1	100	69.027	Astatotilapia_calliptera
ENSTRUG00000009372	urb1	99	49.397	ENSAMXG00000012306	urb1	99	49.352	Astyanax_mexicanus
ENSTRUG00000009372	urb1	99	42.215	ENSBTAG00000012412	URB1	99	42.509	Bos_taurus
ENSTRUG00000009372	urb1	99	44.233	ENSCJAG00000009118	URB1	99	44.080	Callithrix_jacchus
ENSTRUG00000009372	urb1	99	43.218	ENSCAFG00000008892	URB1	99	43.399	Canis_familiaris
ENSTRUG00000009372	urb1	99	42.870	ENSCAFG00020025987	-	99	43.051	Canis_lupus_dingo
ENSTRUG00000009372	urb1	99	42.451	ENSCAFG00020025994	-	99	42.632	Canis_lupus_dingo
ENSTRUG00000009372	urb1	98	42.737	ENSCHIG00000015645	URB1	99	42.989	Capra_hircus
ENSTRUG00000009372	urb1	99	43.884	ENSTSYG00000013286	URB1	99	43.884	Carlito_syrichta
ENSTRUG00000009372	urb1	98	43.054	ENSCAPG00000015589	URB1	99	43.149	Cavia_aperea
ENSTRUG00000009372	urb1	99	43.556	ENSCPOG00000006748	URB1	99	43.693	Cavia_porcellus
ENSTRUG00000009372	urb1	99	44.204	ENSCCAG00000021299	URB1	99	44.226	Cebus_capucinus
ENSTRUG00000009372	urb1	99	44.312	ENSCATG00000042630	URB1	99	44.086	Cercocebus_atys
ENSTRUG00000009372	urb1	99	44.061	ENSCLAG00000005262	URB1	99	44.061	Chinchilla_lanigera
ENSTRUG00000009372	urb1	99	43.591	ENSCSAG00000009584	URB1	99	43.508	Chlorocebus_sabaeus
ENSTRUG00000009372	urb1	99	45.951	ENSCPBG00000006454	URB1	99	45.951	Chrysemys_picta_bellii
ENSTRUG00000009372	urb1	99	44.508	ENSCANG00000031088	URB1	99	44.415	Colobus_angolensis_palliatus
ENSTRUG00000009372	urb1	99	43.497	ENSCGRG00001010616	Urb1	99	43.454	Cricetulus_griseus_chok1gshd
ENSTRUG00000009372	urb1	98	43.611	ENSCGRG00000015840	Urb1	99	43.794	Cricetulus_griseus_crigri
ENSTRUG00000009372	urb1	99	63.428	ENSCSEG00000012616	urb1	99	63.428	Cynoglossus_semilaevis
ENSTRUG00000009372	urb1	93	67.447	ENSCVAG00000009076	urb1	98	69.050	Cyprinodon_variegatus
ENSTRUG00000009372	urb1	99	52.920	ENSDARG00000060308	urb1	99	53.009	Danio_rerio
ENSTRUG00000009372	urb1	85	46.082	ENSDNOG00000015586	URB1	99	46.134	Dasypus_novemcinctus
ENSTRUG00000009372	urb1	99	43.450	ENSDORG00000006735	Urb1	99	43.526	Dipodomys_ordii
ENSTRUG00000009372	urb1	85	51.565	ENSETEG00000009080	URB1	84	51.565	Echinops_telfairi
ENSTRUG00000009372	urb1	99	42.514	ENSEASG00005007711	URB1	99	43.948	Equus_asinus_asinus
ENSTRUG00000009372	urb1	92	52.888	ENSECAG00000013206	URB1	99	52.888	Equus_caballus
ENSTRUG00000009372	urb1	50	56.667	ENSEEUG00000003626	-	50	56.667	Erinaceus_europaeus
ENSTRUG00000009372	urb1	99	54.805	ENSELUG00000020516	urb1	99	54.989	Esox_lucius
ENSTRUG00000009372	urb1	99	42.857	ENSFCAG00000002177	URB1	99	43.170	Felis_catus
ENSTRUG00000009372	urb1	97	42.390	ENSFALG00000004636	URB1	98	42.275	Ficedula_albicollis
ENSTRUG00000009372	urb1	99	43.492	ENSFDAG00000007288	URB1	95	43.647	Fukomys_damarensis
ENSTRUG00000009372	urb1	99	59.601	ENSFHEG00000000202	urb1	99	62.875	Fundulus_heteroclitus
ENSTRUG00000009372	urb1	93	56.503	ENSGMOG00000001838	urb1	94	56.503	Gadus_morhua
ENSTRUG00000009372	urb1	99	45.987	ENSGALG00000015887	URB1	98	45.987	Gallus_gallus
ENSTRUG00000009372	urb1	96	68.797	ENSGAFG00000020694	urb1	99	68.797	Gambusia_affinis
ENSTRUG00000009372	urb1	99	69.728	ENSGACG00000011703	urb1	99	69.728	Gasterosteus_aculeatus
ENSTRUG00000009372	urb1	99	45.390	ENSGAGG00000022544	URB1	99	45.390	Gopherus_agassizii
ENSTRUG00000009372	urb1	99	44.351	ENSGGOG00000000285	URB1	99	44.284	Gorilla_gorilla
ENSTRUG00000009372	urb1	100	68.761	ENSHBUG00000001904	urb1	100	68.938	Haplochromis_burtoni
ENSTRUG00000009372	urb1	99	42.538	ENSHGLG00000004907	URB1	99	42.759	Heterocephalus_glaber_female
ENSTRUG00000009372	urb1	99	42.963	ENSHGLG00100010749	URB1	99	43.187	Heterocephalus_glaber_male
ENSTRUG00000009372	urb1	70	69.030	ENSHCOG00000018683	urb1	98	69.030	Hippocampus_comes
ENSTRUG00000009372	urb1	99	48.374	ENSIPUG00000014721	urb1	99	48.683	Ictalurus_punctatus
ENSTRUG00000009372	urb1	99	43.448	ENSSTOG00000004539	URB1	99	43.354	Ictidomys_tridecemlineatus
ENSTRUG00000009372	urb1	94	66.589	ENSKMAG00000006001	urb1	98	70.403	Kryptolebias_marmoratus
ENSTRUG00000009372	urb1	97	65.666	ENSLBEG00000027208	urb1	99	65.575	Labrus_bergylta
ENSTRUG00000009372	urb1	99	43.745	ENSLACG00000017059	URB1	99	43.788	Latimeria_chalumnae
ENSTRUG00000009372	urb1	99	51.289	ENSLOCG00000009190	urb1	99	51.289	Lepisosteus_oculatus
ENSTRUG00000009372	urb1	99	43.524	ENSLAFG00000010407	URB1	99	43.524	Loxodonta_africana
ENSTRUG00000009372	urb1	99	44.150	ENSMFAG00000034391	URB1	96	43.930	Macaca_fascicularis
ENSTRUG00000009372	urb1	99	43.929	ENSMMUG00000010295	URB1	99	43.843	Macaca_mulatta
ENSTRUG00000009372	urb1	99	43.449	ENSMNEG00000032981	URB1	99	43.220	Macaca_nemestrina
ENSTRUG00000009372	urb1	99	44.067	ENSMLEG00000041435	URB1	99	44.133	Mandrillus_leucophaeus
ENSTRUG00000009372	urb1	99	67.021	ENSMAMG00000011238	urb1	99	67.021	Mastacembelus_armatus
ENSTRUG00000009372	urb1	100	62.236	ENSMZEG00005011862	urb1	100	62.412	Maylandia_zebra
ENSTRUG00000009372	urb1	97	45.762	ENSMGAG00000014512	URB1	98	45.762	Meleagris_gallopavo
ENSTRUG00000009372	urb1	92	52.012	ENSMAUG00000010516	Urb1	99	51.458	Mesocricetus_auratus
ENSTRUG00000009372	urb1	99	43.418	ENSMICG00000016424	URB1	99	43.554	Microcebus_murinus
ENSTRUG00000009372	urb1	99	43.434	ENSMOCG00000012613	Urb1	99	43.596	Microtus_ochrogaster
ENSTRUG00000009372	urb1	99	43.419	ENSMODG00000021076	URB1	99	43.419	Monodelphis_domestica
ENSTRUG00000009372	urb1	99	66.254	ENSMALG00000017411	urb1	99	66.254	Monopterus_albus
ENSTRUG00000009372	urb1	98	43.632	MGP_CAROLIEiJ_G0020948	Urb1	98	43.676	Mus_caroli
ENSTRUG00000009372	urb1	98	43.236	ENSMUSG00000039929	Urb1	98	43.419	Mus_musculus
ENSTRUG00000009372	urb1	98	43.599	MGP_PahariEiJ_G0016653	Urb1	98	43.599	Mus_pahari
ENSTRUG00000009372	urb1	99	42.838	MGP_SPRETEiJ_G0021854	Urb1	99	43.064	Mus_spretus
ENSTRUG00000009372	urb1	99	43.295	ENSMPUG00000001123	URB1	99	43.482	Mustela_putorius_furo
ENSTRUG00000009372	urb1	99	43.125	ENSNGAG00000001905	Urb1	99	43.306	Nannospalax_galili
ENSTRUG00000009372	urb1	83	66.713	ENSNBRG00000001049	urb1	99	66.690	Neolamprologus_brichardi
ENSTRUG00000009372	urb1	98	42.914	ENSNLEG00000026872	URB1	99	42.826	Nomascus_leucogenys
ENSTRUG00000009372	urb1	93	49.903	ENSMEUG00000010828	URB1	96	41.304	Notamacropus_eugenii
ENSTRUG00000009372	urb1	98	41.726	ENSOPRG00000013482	URB1	98	41.778	Ochotona_princeps
ENSTRUG00000009372	urb1	100	42.945	ENSODEG00000002587	URB1	99	43.195	Octodon_degus
ENSTRUG00000009372	urb1	100	69.027	ENSONIG00000005599	urb1	100	69.027	Oreochromis_niloticus
ENSTRUG00000009372	urb1	99	43.415	ENSOCUG00000009381	URB1	99	43.596	Oryctolagus_cuniculus
ENSTRUG00000009372	urb1	99	62.600	ENSORLG00000003429	urb1	99	62.600	Oryzias_latipes
ENSTRUG00000009372	urb1	99	62.384	ENSORLG00020013785	urb1	99	62.384	Oryzias_latipes_hni
ENSTRUG00000009372	urb1	99	60.089	ENSORLG00015019421	urb1	99	68.245	Oryzias_latipes_hsok
ENSTRUG00000009372	urb1	77	65.995	ENSOMEG00000002094	urb1	97	65.995	Oryzias_melastigma
ENSTRUG00000009372	urb1	99	43.414	ENSOGAG00000017140	URB1	99	43.570	Otolemur_garnettii
ENSTRUG00000009372	urb1	94	46.174	ENSOARG00000013679	URB1	98	45.746	Ovis_aries
ENSTRUG00000009372	urb1	99	44.184	ENSPPAG00000003423	URB1	99	44.119	Pan_paniscus
ENSTRUG00000009372	urb1	99	42.895	ENSPPRG00000023131	URB1	99	43.207	Panthera_pardus
ENSTRUG00000009372	urb1	88	44.185	ENSPTIG00000016125	URB1	94	44.472	Panthera_tigris_altaica
ENSTRUG00000009372	urb1	99	44.184	ENSPTRG00000013852	URB1	99	44.119	Pan_troglodytes
ENSTRUG00000009372	urb1	99	44.194	ENSPANG00000021964	URB1	99	44.037	Papio_anubis
ENSTRUG00000009372	urb1	100	51.424	ENSPKIG00000003683	urb1	99	51.556	Paramormyrops_kingsleyae
ENSTRUG00000009372	urb1	98	43.565	ENSPEMG00000021205	Urb1	98	43.747	Peromyscus_maniculatus_bairdii
ENSTRUG00000009372	urb1	76	33.247	ENSPMAG00000009733	URB1	99	32.516	Petromyzon_marinus
ENSTRUG00000009372	urb1	99	42.794	ENSPCIG00000016350	URB1	99	43.083	Phascolarctos_cinereus
ENSTRUG00000009372	urb1	97	64.580	ENSPLAG00000004371	urb1	99	64.580	Poecilia_latipinna
ENSTRUG00000009372	urb1	99	64.821	ENSPMEG00000006634	urb1	99	64.821	Poecilia_mexicana
ENSTRUG00000009372	urb1	99	64.852	ENSPREG00000013453	urb1	99	64.852	Poecilia_reticulata
ENSTRUG00000009372	urb1	99	43.974	ENSPPYG00000011359	URB1	99	44.109	Pongo_abelii
ENSTRUG00000009372	urb1	99	38.928	ENSPCAG00000007430	URB1	99	38.928	Procavia_capensis
ENSTRUG00000009372	urb1	99	43.457	ENSPCOG00000022695	URB1	99	43.668	Propithecus_coquereli
ENSTRUG00000009372	urb1	99	42.888	ENSPVAG00000000889	URB1	99	42.888	Pteropus_vampyrus
ENSTRUG00000009372	urb1	100	65.942	ENSPNYG00000010589	urb1	100	66.120	Pundamilia_nyererei
ENSTRUG00000009372	urb1	99	49.737	ENSPNAG00000019324	urb1	99	50.132	Pygocentrus_nattereri
ENSTRUG00000009372	urb1	99	43.355	ENSRNOG00000002080	Urb1	99	43.442	Rattus_norvegicus
ENSTRUG00000009372	urb1	99	43.940	ENSRBIG00000033122	URB1	99	44.119	Rhinopithecus_bieti
ENSTRUG00000009372	urb1	99	44.004	ENSRROG00000040237	URB1	99	44.094	Rhinopithecus_roxellana
ENSTRUG00000009372	urb1	99	43.982	ENSSBOG00000027672	URB1	99	44.119	Saimiri_boliviensis_boliviensis
ENSTRUG00000009372	urb1	99	43.643	ENSSHAG00000005140	URB1	99	43.687	Sarcophilus_harrisii
ENSTRUG00000009372	urb1	93	55.207	ENSSFOG00015000339	urb1	99	55.207	Scleropages_formosus
ENSTRUG00000009372	urb1	99	70.274	ENSSMAG00000003782	urb1	99	70.760	Scophthalmus_maximus
ENSTRUG00000009372	urb1	99	73.505	ENSSDUG00000012313	urb1	99	73.505	Seriola_dumerili
ENSTRUG00000009372	urb1	99	72.840	ENSSLDG00000023179	urb1	99	72.840	Seriola_lalandi_dorsalis
ENSTRUG00000009372	urb1	99	44.367	ENSSPUG00000012447	URB1	99	44.478	Sphenodon_punctatus
ENSTRUG00000009372	urb1	99	69.571	ENSSPAG00000006325	urb1	99	69.571	Stegastes_partitus
ENSTRUG00000009372	urb1	98	42.756	ENSSSCG00000032024	URB1	98	42.940	Sus_scrofa
ENSTRUG00000009372	urb1	74	47.628	ENSTGUG00000013442	URB1	100	47.628	Taeniopygia_guttata
ENSTRUG00000009372	urb1	99	81.035	ENSTNIG00000016277	urb1	99	81.035	Tetraodon_nigroviridis
ENSTRUG00000009372	urb1	79	47.093	ENSTBEG00000010044	URB1	78	47.093	Tupaia_belangeri
ENSTRUG00000009372	urb1	88	48.690	ENSTTRG00000007712	URB1	92	47.472	Tursiops_truncatus
ENSTRUG00000009372	urb1	99	43.057	ENSUAMG00000012231	URB1	99	43.239	Ursus_americanus
ENSTRUG00000009372	urb1	83	54.031	ENSUMAG00000017419	URB1	96	44.585	Ursus_maritimus
ENSTRUG00000009372	urb1	65	60.000	ENSVPAG00000001164	URB1	70	60.000	Vicugna_pacos
ENSTRUG00000009372	urb1	95	52.822	ENSVVUG00000000551	URB1	99	43.364	Vulpes_vulpes
ENSTRUG00000009372	urb1	99	44.659	ENSXETG00000009895	urb1	98	44.703	Xenopus_tropicalis
ENSTRUG00000009372	urb1	97	71.038	ENSXCOG00000005500	urb1	100	71.038	Xiphophorus_couchianus
ENSTRUG00000009372	urb1	97	72.131	ENSXMAG00000007253	urb1	100	72.131	Xiphophorus_maculatus