EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000009470 (Gene tree)
Gene ID: 101079008
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 21077 bases
Position: chr15:6606506-6627582
Accession: 101079008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000023788	La	PF05383.17	9.3e-21	1	1
ENSTRUP00000023787	La	PF05383.17	9.6e-21	1	1
ENSTRUP00000023789	La	PF05383.17	1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000023886	-	3159	-	ENSTRUP00000023788	1052 (aa)	-	H2TGJ0
ENSTRUT00000023887	-	5553	XM_011611364	ENSTRUP00000023789	1107 (aa)	XP_011609666	H2TGJ1
ENSTRUT00000023885	-	5481	-	ENSTRUP00000023787	1083 (aa)	-	H2TGI9

Gene Model

Click here to download ENSTRUG00000009470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000009470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000009470	larp1	92	51.302	ENSTRUG00000005612	larp1b	92	53.047

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000009470	larp1	86	67.050	ENSG00000155506	LARP1	95	75.824	Homo_sapiens
ENSTRUG00000009470	larp1	88	95.475	ENSAPOG00000020685	larp1	98	95.475	Acanthochromis_polyacanthus
ENSTRUG00000009470	larp1	88	66.022	ENSAMEG00000016673	LARP1	99	66.461	Ailuropoda_melanoleuca
ENSTRUG00000009470	larp1	99	79.812	ENSACIG00000012994	larp1	99	79.249	Amphilophus_citrinellus
ENSTRUG00000009470	larp1	78	89.319	ENSAOCG00000007792	larp1	99	89.319	Amphiprion_ocellaris
ENSTRUG00000009470	larp1	99	86.188	ENSAPEG00000022246	larp1	99	86.096	Amphiprion_percula
ENSTRUG00000009470	larp1	98	84.686	ENSATEG00000013523	larp1	99	85.804	Anabas_testudineus
ENSTRUG00000009470	larp1	80	72.266	ENSAPLG00000007559	LARP1	99	72.266	Anas_platyrhynchos
ENSTRUG00000009470	larp1	88	67.774	ENSACAG00000004071	LARP1	99	72.191	Anolis_carolinensis
ENSTRUG00000009470	larp1	86	67.050	ENSANAG00000029949	LARP1	99	65.000	Aotus_nancymaae
ENSTRUG00000009470	larp1	99	85.662	ENSACLG00000015256	larp1	99	87.792	Astatotilapia_calliptera
ENSTRUG00000009470	larp1	99	74.741	ENSAMXG00000000859	larp1	99	74.929	Astyanax_mexicanus
ENSTRUG00000009470	larp1	96	62.960	ENSBTAG00000008443	LARP1	99	62.489	Bos_taurus
ENSTRUG00000009470	larp1	99	62.795	ENSCJAG00000004454	LARP1	97	65.365	Callithrix_jacchus
ENSTRUG00000009470	larp1	88	66.022	ENSCAFG00000017639	LARP1	99	66.358	Canis_familiaris
ENSTRUG00000009470	larp1	82	67.763	ENSCAFG00020023860	LARP1	99	68.147	Canis_lupus_dingo
ENSTRUG00000009470	larp1	96	63.399	ENSCHIG00000014414	LARP1	99	60.893	Capra_hircus
ENSTRUG00000009470	larp1	86	67.400	ENSTSYG00000013732	LARP1	98	65.919	Carlito_syrichta
ENSTRUG00000009470	larp1	75	68.585	ENSCAPG00000013865	LARP1	83	69.016	Cavia_aperea
ENSTRUG00000009470	larp1	83	68.575	ENSCPOG00000003377	LARP1	99	66.667	Cavia_porcellus
ENSTRUG00000009470	larp1	99	62.523	ENSCCAG00000025201	LARP1	97	65.100	Cebus_capucinus
ENSTRUG00000009470	larp1	99	60.490	ENSCATG00000030675	LARP1	97	65.100	Cercocebus_atys
ENSTRUG00000009470	larp1	90	65.666	ENSCLAG00000012755	LARP1	99	65.500	Chinchilla_lanigera
ENSTRUG00000009470	larp1	80	66.479	ENSCSAG00000010800	LARP1	98	66.817	Chlorocebus_sabaeus
ENSTRUG00000009470	larp1	83	64.192	ENSCHOG00000012716	LARP1	91	64.234	Choloepus_hoffmanni
ENSTRUG00000009470	larp1	89	72.292	ENSCPBG00000002173	LARP1	92	72.914	Chrysemys_picta_bellii
ENSTRUG00000009470	larp1	90	65.400	ENSCANG00000037418	LARP1	97	65.400	Colobus_angolensis_palliatus
ENSTRUG00000009470	larp1	99	62.875	ENSCGRG00001016913	Larp1	99	62.603	Cricetulus_griseus_chok1gshd
ENSTRUG00000009470	larp1	83	65.033	ENSCGRG00000009916	Larp1	99	65.033	Cricetulus_griseus_crigri
ENSTRUG00000009470	larp1	99	84.573	ENSCSEG00000016431	larp1	99	84.573	Cynoglossus_semilaevis
ENSTRUG00000009470	larp1	99	82.106	ENSCVAG00000022687	larp1	99	82.768	Cyprinodon_variegatus
ENSTRUG00000009470	larp1	99	68.887	ENSDARG00000101722	larp1	96	73.029	Danio_rerio
ENSTRUG00000009470	larp1	99	61.704	ENSDNOG00000012073	LARP1	99	61.649	Dasypus_novemcinctus
ENSTRUG00000009470	larp1	87	63.768	ENSDORG00000002897	Larp1	98	64.323	Dipodomys_ordii
ENSTRUG00000009470	larp1	80	68.919	ENSETEG00000020251	LARP1	100	68.694	Echinops_telfairi
ENSTRUG00000009470	larp1	99	61.504	ENSEASG00005001070	LARP1	99	61.717	Equus_asinus_asinus
ENSTRUG00000009470	larp1	99	61.594	ENSECAG00000017002	LARP1	78	63.173	Equus_caballus
ENSTRUG00000009470	larp1	86	62.604	ENSEEUG00000001065	LARP1	99	64.000	Erinaceus_europaeus
ENSTRUG00000009470	larp1	99	76.937	ENSELUG00000019403	larp1	99	76.944	Esox_lucius
ENSTRUG00000009470	larp1	99	61.717	ENSFCAG00000000592	LARP1	99	62.109	Felis_catus
ENSTRUG00000009470	larp1	76	73.934	ENSFALG00000008335	LARP1	99	71.985	Ficedula_albicollis
ENSTRUG00000009470	larp1	87	66.701	ENSFDAG00000021125	LARP1	99	66.736	Fukomys_damarensis
ENSTRUG00000009470	larp1	62	78.733	ENSFHEG00000020307	larp1	97	78.979	Fundulus_heteroclitus
ENSTRUG00000009470	larp1	99	66.915	ENSGALG00000040109	LARP1	99	70.062	Gallus_gallus
ENSTRUG00000009470	larp1	99	67.093	ENSGAGG00000025113	LARP1	96	74.971	Gopherus_agassizii
ENSTRUG00000009470	larp1	88	65.921	ENSGGOG00000006048	LARP1	94	66.564	Gorilla_gorilla
ENSTRUG00000009470	larp1	99	86.239	ENSHBUG00000020762	larp1	99	88.446	Haplochromis_burtoni
ENSTRUG00000009470	larp1	99	61.892	ENSHGLG00000006267	LARP1	99	61.759	Heterocephalus_glaber_female
ENSTRUG00000009470	larp1	87	66.736	ENSHGLG00100014230	-	99	66.460	Heterocephalus_glaber_male
ENSTRUG00000009470	larp1	86	58.184	ENSHGLG00100003395	-	89	56.653	Heterocephalus_glaber_male
ENSTRUG00000009470	larp1	91	92.718	ENSHCOG00000010786	larp1	99	92.961	Hippocampus_comes
ENSTRUG00000009470	larp1	97	71.070	ENSIPUG00000019105	Larp1	95	77.730	Ictalurus_punctatus
ENSTRUG00000009470	larp1	87	65.263	ENSSTOG00000005678	LARP1	99	65.579	Ictidomys_tridecemlineatus
ENSTRUG00000009470	larp1	96	60.302	ENSJJAG00000016950	Larp1	99	59.116	Jaculus_jaculus
ENSTRUG00000009470	larp1	99	83.533	ENSKMAG00000018468	larp1	99	87.295	Kryptolebias_marmoratus
ENSTRUG00000009470	larp1	99	84.564	ENSLBEG00000027172	larp1	99	84.112	Labrus_bergylta
ENSTRUG00000009470	larp1	94	76.453	ENSLOCG00000012457	larp1	95	81.057	Lepisosteus_oculatus
ENSTRUG00000009470	larp1	99	61.935	ENSLAFG00000008991	LARP1	99	61.427	Loxodonta_africana
ENSTRUG00000009470	larp1	86	67.050	ENSMFAG00000031651	LARP1	97	64.800	Macaca_fascicularis
ENSTRUG00000009470	larp1	86	64.465	ENSMMUG00000009411	LARP1	98	64.916	Macaca_mulatta
ENSTRUG00000009470	larp1	80	68.771	ENSMNEG00000039294	LARP1	98	69.040	Macaca_nemestrina
ENSTRUG00000009470	larp1	86	67.364	ENSMLEG00000035142	LARP1	97	65.200	Mandrillus_leucophaeus
ENSTRUG00000009470	larp1	99	84.698	ENSMAMG00000021788	larp1	99	85.149	Mastacembelus_armatus
ENSTRUG00000009470	larp1	99	85.662	ENSMZEG00005009345	larp1	99	87.792	Maylandia_zebra
ENSTRUG00000009470	larp1	87	70.701	ENSMGAG00000005696	LARP1	99	70.807	Meleagris_gallopavo
ENSTRUG00000009470	larp1	99	62.285	ENSMAUG00000001385	Larp1	99	62.695	Mesocricetus_auratus
ENSTRUG00000009470	larp1	88	65.314	ENSMICG00000000837	LARP1	99	68.632	Microcebus_murinus
ENSTRUG00000009470	larp1	99	62.693	ENSMOCG00000008920	Larp1	99	62.328	Microtus_ochrogaster
ENSTRUG00000009470	larp1	94	66.345	ENSMMOG00000013364	larp1	99	68.370	Mola_mola
ENSTRUG00000009470	larp1	86	68.809	ENSMODG00000008663	LARP1	98	69.020	Monodelphis_domestica
ENSTRUG00000009470	larp1	99	84.463	ENSMALG00000017180	larp1	99	84.101	Monopterus_albus
ENSTRUG00000009470	larp1	99	63.187	MGP_CAROLIEiJ_G0016383	Larp1	99	62.912	Mus_caroli
ENSTRUG00000009470	larp1	99	63.278	ENSMUSG00000037331	Larp1	99	63.004	Mus_musculus
ENSTRUG00000009470	larp1	99	62.946	MGP_PahariEiJ_G0017518	Larp1	99	62.763	Mus_pahari
ENSTRUG00000009470	larp1	99	63.403	MGP_SPRETEiJ_G0017225	Larp1	99	62.912	Mus_spretus
ENSTRUG00000009470	larp1	82	59.611	ENSMPUG00000013564	LARP1	99	59.474	Mustela_putorius_furo
ENSTRUG00000009470	larp1	86	63.551	ENSMLUG00000002608	LARP1	99	63.788	Myotis_lucifugus
ENSTRUG00000009470	larp1	86	65.352	ENSNGAG00000001098	Larp1	98	64.234	Nannospalax_galili
ENSTRUG00000009470	larp1	89	88.266	ENSNBRG00000008963	larp1	98	88.584	Neolamprologus_brichardi
ENSTRUG00000009470	larp1	86	66.246	ENSNLEG00000016588	LARP1	98	65.282	Nomascus_leucogenys
ENSTRUG00000009470	larp1	86	65.199	ENSMEUG00000002957	LARP1	99	65.199	Notamacropus_eugenii
ENSTRUG00000009470	larp1	83	68.467	ENSOPRG00000013014	LARP1	99	66.667	Ochotona_princeps
ENSTRUG00000009470	larp1	88	66.022	ENSODEG00000010824	LARP1	99	66.598	Octodon_degus
ENSTRUG00000009470	larp1	99	83.303	ENSONIG00000017308	larp1	99	83.668	Oreochromis_niloticus
ENSTRUG00000009470	larp1	90	67.067	ENSOANG00000005096	LARP1	98	69.262	Ornithorhynchus_anatinus
ENSTRUG00000009470	larp1	99	62.873	ENSOCUG00000013066	LARP1	99	62.455	Oryctolagus_cuniculus
ENSTRUG00000009470	larp1	99	82.255	ENSORLG00000000824	larp1	99	84.255	Oryzias_latipes
ENSTRUG00000009470	larp1	99	82.163	ENSORLG00020022241	larp1	99	82.255	Oryzias_latipes_hni
ENSTRUG00000009470	larp1	99	80.499	ENSORLG00015007538	larp1	99	81.793	Oryzias_latipes_hsok
ENSTRUG00000009470	larp1	99	80.591	ENSOMEG00000003134	larp1	99	81.423	Oryzias_melastigma
ENSTRUG00000009470	larp1	87	66.942	ENSOGAG00000016750	LARP1	99	66.667	Otolemur_garnettii
ENSTRUG00000009470	larp1	84	66.702	ENSOARG00000009893	LARP1	99	65.172	Ovis_aries
ENSTRUG00000009470	larp1	86	67.050	ENSPPAG00000042993	LARP1	92	67.364	Pan_paniscus
ENSTRUG00000009470	larp1	88	64.670	ENSPPRG00000009780	LARP1	94	64.470	Panthera_pardus
ENSTRUG00000009470	larp1	88	64.766	ENSPTIG00000007013	LARP1	94	64.985	Panthera_tigris_altaica
ENSTRUG00000009470	larp1	99	60.000	ENSPTRG00000017447	LARP1	99	60.545	Pan_troglodytes
ENSTRUG00000009470	larp1	99	60.490	ENSPANG00000008080	LARP1	97	65.200	Papio_anubis
ENSTRUG00000009470	larp1	98	68.857	ENSPKIG00000017153	-	99	70.100	Paramormyrops_kingsleyae
ENSTRUG00000009470	larp1	99	74.209	ENSPKIG00000010096	larp1	99	74.610	Paramormyrops_kingsleyae
ENSTRUG00000009470	larp1	95	79.200	ENSPMGG00000011599	larp1	95	84.691	Periophthalmus_magnuspinnatus
ENSTRUG00000009470	larp1	87	64.953	ENSPEMG00000022523	Larp1	98	64.472	Peromyscus_maniculatus_bairdii
ENSTRUG00000009470	larp1	96	64.689	ENSPCIG00000019242	LARP1	89	65.370	Phascolarctos_cinereus
ENSTRUG00000009470	larp1	99	80.323	ENSPFOG00000005836	larp1	99	80.234	Poecilia_formosa
ENSTRUG00000009470	larp1	99	80.716	ENSPLAG00000008936	larp1	99	80.808	Poecilia_latipinna
ENSTRUG00000009470	larp1	99	80.054	ENSPMEG00000013656	larp1	99	79.964	Poecilia_mexicana
ENSTRUG00000009470	larp1	88	83.368	ENSPREG00000005726	larp1	99	83.368	Poecilia_reticulata
ENSTRUG00000009470	larp1	86	64.553	ENSPCAG00000006407	LARP1	93	78.992	Procavia_capensis
ENSTRUG00000009470	larp1	88	58.317	ENSPCOG00000016949	LARP1	99	62.268	Propithecus_coquereli
ENSTRUG00000009470	larp1	96	62.259	ENSPVAG00000002262	LARP1	99	61.607	Pteropus_vampyrus
ENSTRUG00000009470	larp1	99	85.662	ENSPNYG00000007938	larp1	99	87.894	Pundamilia_nyererei
ENSTRUG00000009470	larp1	99	73.888	ENSPNAG00000021427	larp1	99	75.497	Pygocentrus_nattereri
ENSTRUG00000009470	larp1	86	64.607	ENSRNOG00000031544	Larp1	98	64.607	Rattus_norvegicus
ENSTRUG00000009470	larp1	90	65.200	ENSRBIG00000038005	LARP1	97	65.200	Rhinopithecus_bieti
ENSTRUG00000009470	larp1	90	65.200	ENSRROG00000034073	LARP1	98	69.379	Rhinopithecus_roxellana
ENSTRUG00000009470	larp1	86	67.261	ENSSBOG00000019816	LARP1	99	65.131	Saimiri_boliviensis_boliviensis
ENSTRUG00000009470	larp1	86	70.064	ENSSHAG00000011115	LARP1	99	70.064	Sarcophilus_harrisii
ENSTRUG00000009470	larp1	99	74.004	ENSSFOG00015018058	-	99	73.421	Scleropages_formosus
ENSTRUG00000009470	larp1	88	76.313	ENSSFOG00015020304	larp1	95	75.300	Scleropages_formosus
ENSTRUG00000009470	larp1	93	86.165	ENSSMAG00000007468	larp1	98	87.894	Scophthalmus_maximus
ENSTRUG00000009470	larp1	99	87.198	ENSSDUG00000000268	larp1	99	87.556	Seriola_dumerili
ENSTRUG00000009470	larp1	82	84.555	ENSSLDG00000016505	larp1	99	84.554	Seriola_lalandi_dorsalis
ENSTRUG00000009470	larp1	57	76.950	ENSSARG00000013907	-	88	78.445	Sorex_araneus
ENSTRUG00000009470	larp1	99	65.402	ENSSPUG00000012179	-	99	65.940	Sphenodon_punctatus
ENSTRUG00000009470	larp1	99	87.329	ENSSPAG00000003910	larp1	99	87.238	Stegastes_partitus
ENSTRUG00000009470	larp1	99	60.762	ENSSSCG00000017069	LARP1	99	67.437	Sus_scrofa
ENSTRUG00000009470	larp1	83	71.196	ENSTGUG00000000704	LARP1	100	71.087	Taeniopygia_guttata
ENSTRUG00000009470	larp1	81	66.962	ENSTBEG00000003381	LARP1	99	67.003	Tupaia_belangeri
ENSTRUG00000009470	larp1	85	67.019	ENSTTRG00000015934	LARP1	99	67.015	Tursiops_truncatus
ENSTRUG00000009470	larp1	99	60.743	ENSUAMG00000019334	LARP1	99	61.752	Ursus_americanus
ENSTRUG00000009470	larp1	87	64.041	ENSUMAG00000002934	LARP1	96	68.981	Ursus_maritimus
ENSTRUG00000009470	larp1	82	67.763	ENSVVUG00000004644	LARP1	99	68.147	Vulpes_vulpes
ENSTRUG00000009470	larp1	91	70.547	ENSXETG00000008413	larp1	95	70.142	Xenopus_tropicalis
ENSTRUG00000009470	larp1	86	85.420	ENSXCOG00000004022	larp1	98	85.399	Xiphophorus_couchianus
ENSTRUG00000009470	larp1	99	80.126	ENSXMAG00000018780	larp1	99	80.216	Xiphophorus_maculatus