EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000009483 (Gene tree)
Gene ID: 101070214
Gene Symbol: farsb
Alias: cb428|farsl|zgc:92055
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 9179 bases
Position: chr11:10320452-10329630
Accession: 101070214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000023820	B3_4	PF03483.17	4.6e-27	1	1
ENSTRUP00000023820	B5	PF03484.15	1.3e-14	1	1
ENSTRUP00000023820	EF1_GNE	PF00736.19	1.2e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000023918	-	4421	XM_003968750	ENSTRUP00000023820	844 (aa)	XP_003968799	H2TGM2

Gene Model

Click here to download ENSTRUG00000009483's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000009483's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000009483	farsb	70	75.424	ENSG00000116120	FARSB	100	75.424	Homo_sapiens
ENSTRUG00000009483	farsb	100	84.198	ENSAPOG00000013072	farsb	100	84.198	Acanthochromis_polyacanthus
ENSTRUG00000009483	farsb	70	75.763	ENSAMEG00000005984	FARSB	100	75.763	Ailuropoda_melanoleuca
ENSTRUG00000009483	farsb	70	83.192	ENSACIG00000021623	farsb	100	83.192	Amphilophus_citrinellus
ENSTRUG00000009483	farsb	100	84.552	ENSAOCG00000004912	farsb	100	84.552	Amphiprion_ocellaris
ENSTRUG00000009483	farsb	100	84.670	ENSAPEG00000001153	farsb	100	84.670	Amphiprion_percula
ENSTRUG00000009483	farsb	100	83.333	ENSATEG00000021441	farsb	100	83.333	Anabas_testudineus
ENSTRUG00000009483	farsb	69	74.271	ENSAPLG00000010292	FARSB	99	74.271	Anas_platyrhynchos
ENSTRUG00000009483	farsb	70	74.873	ENSACAG00000004769	FARSB	98	74.873	Anolis_carolinensis
ENSTRUG00000009483	farsb	70	74.915	ENSANAG00000024637	FARSB	100	74.915	Aotus_nancymaae
ENSTRUG00000009483	farsb	100	83.137	ENSACLG00000013951	farsb	100	83.713	Astatotilapia_calliptera
ENSTRUG00000009483	farsb	59	78.758	ENSAMXG00000033881	farsb	100	78.758	Astyanax_mexicanus
ENSTRUG00000009483	farsb	67	73.982	ENSBTAG00000045523	-	100	73.982	Bos_taurus
ENSTRUG00000009483	farsb	70	75.254	ENSBTAG00000011649	FARSB	100	75.254	Bos_taurus
ENSTRUG00000009483	farsb	70	57.432	WBGene00001498	fars-3	100	57.432	Caenorhabditis_elegans
ENSTRUG00000009483	farsb	70	75.593	ENSCJAG00000012181	FARSB	100	75.593	Callithrix_jacchus
ENSTRUG00000009483	farsb	70	76.102	ENSCAFG00000016094	-	100	76.102	Canis_familiaris
ENSTRUG00000009483	farsb	70	73.266	ENSCAFG00020026684	FARSB	100	75.355	Canis_lupus_dingo
ENSTRUG00000009483	farsb	70	75.593	ENSCHIG00000014275	FARSB	100	75.593	Capra_hircus
ENSTRUG00000009483	farsb	70	75.254	ENSTSYG00000008461	FARSB	100	75.254	Carlito_syrichta
ENSTRUG00000009483	farsb	67	68.522	ENSCAPG00000016436	FARSB	99	68.522	Cavia_aperea
ENSTRUG00000009483	farsb	70	74.915	ENSCPOG00000013109	FARSB	100	74.915	Cavia_porcellus
ENSTRUG00000009483	farsb	70	71.356	ENSCCAG00000025840	FARSB	100	71.356	Cebus_capucinus
ENSTRUG00000009483	farsb	70	75.593	ENSCATG00000036168	FARSB	100	75.593	Cercocebus_atys
ENSTRUG00000009483	farsb	70	74.915	ENSCLAG00000011954	FARSB	100	74.915	Chinchilla_lanigera
ENSTRUG00000009483	farsb	70	75.593	ENSCSAG00000007806	FARSB	100	75.593	Chlorocebus_sabaeus
ENSTRUG00000009483	farsb	56	87.500	ENSCHOG00000011785	FARSB	80	87.500	Choloepus_hoffmanni
ENSTRUG00000009483	farsb	70	76.401	ENSCPBG00000019346	FARSB	98	76.401	Chrysemys_picta_bellii
ENSTRUG00000009483	farsb	70	61.204	ENSCING00000004180	-	99	61.204	Ciona_intestinalis
ENSTRUG00000009483	farsb	70	62.375	ENSCSAVG00000005346	-	99	62.375	Ciona_savignyi
ENSTRUG00000009483	farsb	67	74.912	ENSCANG00000036239	FARSB	100	74.912	Colobus_angolensis_palliatus
ENSTRUG00000009483	farsb	70	76.271	ENSCGRG00001022928	Farsb	100	76.271	Cricetulus_griseus_chok1gshd
ENSTRUG00000009483	farsb	70	76.271	ENSCGRG00000001513	Farsb	100	76.271	Cricetulus_griseus_crigri
ENSTRUG00000009483	farsb	74	84.480	ENSCSEG00000005415	farsb	100	84.480	Cynoglossus_semilaevis
ENSTRUG00000009483	farsb	53	82.889	ENSCVAG00000018815	farsb	98	82.889	Cyprinodon_variegatus
ENSTRUG00000009483	farsb	70	81.356	ENSDARG00000016864	farsb	100	81.356	Danio_rerio
ENSTRUG00000009483	farsb	70	74.915	ENSDNOG00000002511	FARSB	100	74.915	Dasypus_novemcinctus
ENSTRUG00000009483	farsb	70	75.085	ENSDORG00000011102	Farsb	100	75.085	Dipodomys_ordii
ENSTRUG00000009483	farsb	70	62.901	FBgn0039175	beta-PheRS	100	62.901	Drosophila_melanogaster
ENSTRUG00000009483	farsb	67	72.456	ENSETEG00000015080	FARSB	100	72.456	Echinops_telfairi
ENSTRUG00000009483	farsb	70	64.407	ENSEBUG00000006846	farsb	100	64.407	Eptatretus_burgeri
ENSTRUG00000009483	farsb	70	75.932	ENSEASG00005011297	FARSB	100	75.932	Equus_asinus_asinus
ENSTRUG00000009483	farsb	70	73.322	ENSECAG00000023086	FARSB	99	76.147	Equus_caballus
ENSTRUG00000009483	farsb	63	70.213	ENSEEUG00000007441	FARSB	91	70.213	Erinaceus_europaeus
ENSTRUG00000009483	farsb	68	82.487	ENSELUG00000014767	farsb	99	82.487	Esox_lucius
ENSTRUG00000009483	farsb	70	75.932	ENSFCAG00000026772	FARSB	100	75.932	Felis_catus
ENSTRUG00000009483	farsb	67	73.989	ENSFALG00000006739	FARSB	96	73.989	Ficedula_albicollis
ENSTRUG00000009483	farsb	70	75.254	ENSFDAG00000008871	FARSB	100	75.254	Fukomys_damarensis
ENSTRUG00000009483	farsb	100	81.775	ENSFHEG00000020939	farsb	98	85.556	Fundulus_heteroclitus
ENSTRUG00000009483	farsb	64	83.302	ENSGMOG00000013047	farsb	99	83.302	Gadus_morhua
ENSTRUG00000009483	farsb	70	75.722	ENSGALG00000005236	FARSB	100	75.722	Gallus_gallus
ENSTRUG00000009483	farsb	100	81.110	ENSGAFG00000020900	farsb	100	81.110	Gambusia_affinis
ENSTRUG00000009483	farsb	64	85.158	ENSGACG00000000261	farsb	99	85.158	Gasterosteus_aculeatus
ENSTRUG00000009483	farsb	70	76.740	ENSGAGG00000016575	FARSB	98	76.740	Gopherus_agassizii
ENSTRUG00000009483	farsb	100	83.255	ENSHBUG00000022379	farsb	100	84.211	Haplochromis_burtoni
ENSTRUG00000009483	farsb	70	75.254	ENSHGLG00000015965	FARSB	100	75.254	Heterocephalus_glaber_female
ENSTRUG00000009483	farsb	70	75.254	ENSHGLG00100001035	FARSB	100	75.254	Heterocephalus_glaber_male
ENSTRUG00000009483	farsb	64	78.358	ENSHCOG00000016462	farsb	100	78.358	Hippocampus_comes
ENSTRUG00000009483	farsb	70	80.306	ENSIPUG00000002754	farsb	100	80.306	Ictalurus_punctatus
ENSTRUG00000009483	farsb	70	75.254	ENSSTOG00000016169	FARSB	100	75.254	Ictidomys_tridecemlineatus
ENSTRUG00000009483	farsb	70	75.085	ENSJJAG00000003267	Farsb	100	75.085	Jaculus_jaculus
ENSTRUG00000009483	farsb	70	76.819	ENSKMAG00000005363	farsb	100	76.819	Kryptolebias_marmoratus
ENSTRUG00000009483	farsb	100	83.353	ENSLBEG00000018127	farsb	100	83.353	Labrus_bergylta
ENSTRUG00000009483	farsb	70	77.589	ENSLACG00000002551	FARSB	100	77.589	Latimeria_chalumnae
ENSTRUG00000009483	farsb	70	80.306	ENSLOCG00000004136	farsb	100	80.306	Lepisosteus_oculatus
ENSTRUG00000009483	farsb	70	75.254	ENSLAFG00000015659	FARSB	100	75.254	Loxodonta_africana
ENSTRUG00000009483	farsb	70	75.424	ENSMFAG00000036645	FARSB	100	75.424	Macaca_fascicularis
ENSTRUG00000009483	farsb	70	73.051	ENSMMUG00000007685	FARSB	100	73.051	Macaca_mulatta
ENSTRUG00000009483	farsb	70	75.254	ENSMNEG00000030672	FARSB	100	75.254	Macaca_nemestrina
ENSTRUG00000009483	farsb	70	75.593	ENSMLEG00000042060	FARSB	100	75.593	Mandrillus_leucophaeus
ENSTRUG00000009483	farsb	100	83.392	ENSMAMG00000011835	farsb	100	83.392	Mastacembelus_armatus
ENSTRUG00000009483	farsb	67	83.684	ENSMZEG00005004544	farsb	100	83.684	Maylandia_zebra
ENSTRUG00000009483	farsb	66	74.955	ENSMGAG00000004670	FARSB	100	74.955	Meleagris_gallopavo
ENSTRUG00000009483	farsb	50	75.000	ENSMAUG00000017805	Farsb	100	75.000	Mesocricetus_auratus
ENSTRUG00000009483	farsb	70	75.932	ENSMICG00000002495	FARSB	100	75.932	Microcebus_murinus
ENSTRUG00000009483	farsb	70	77.080	ENSMOCG00000003181	Farsb	100	77.080	Microtus_ochrogaster
ENSTRUG00000009483	farsb	70	81.834	ENSMMOG00000006265	farsb	100	81.834	Mola_mola
ENSTRUG00000009483	farsb	70	78.098	ENSMODG00000021192	FARSB	100	78.098	Monodelphis_domestica
ENSTRUG00000009483	farsb	65	86.025	ENSMALG00000021188	farsb	92	86.025	Monopterus_albus
ENSTRUG00000009483	farsb	70	75.932	MGP_CAROLIEiJ_G0014310	Farsb	100	75.932	Mus_caroli
ENSTRUG00000009483	farsb	70	76.102	ENSMUSG00000026245	Farsb	100	76.102	Mus_musculus
ENSTRUG00000009483	farsb	70	75.932	MGP_PahariEiJ_G0027548	Farsb	100	75.932	Mus_pahari
ENSTRUG00000009483	farsb	70	75.763	MGP_SPRETEiJ_G0015116	Farsb	100	75.763	Mus_spretus
ENSTRUG00000009483	farsb	70	75.763	ENSMPUG00000016677	FARSB	100	75.763	Mustela_putorius_furo
ENSTRUG00000009483	farsb	70	76.610	ENSMLUG00000010904	FARSB	100	76.610	Myotis_lucifugus
ENSTRUG00000009483	farsb	70	75.212	ENSNGAG00000014602	Farsb	100	75.212	Nannospalax_galili
ENSTRUG00000009483	farsb	100	83.844	ENSNBRG00000003198	farsb	100	83.844	Neolamprologus_brichardi
ENSTRUG00000009483	farsb	70	75.593	ENSNLEG00000009638	FARSB	100	75.593	Nomascus_leucogenys
ENSTRUG00000009483	farsb	70	68.421	ENSMEUG00000010798	FARSB	100	68.421	Notamacropus_eugenii
ENSTRUG00000009483	farsb	62	69.286	ENSOPRG00000003292	FARSB	89	69.286	Ochotona_princeps
ENSTRUG00000009483	farsb	70	75.932	ENSODEG00000005451	FARSB	100	75.932	Octodon_degus
ENSTRUG00000009483	farsb	70	86.927	ENSONIG00000014639	farsb	100	86.927	Oreochromis_niloticus
ENSTRUG00000009483	farsb	63	74.393	ENSOANG00000015387	FARSB	100	74.393	Ornithorhynchus_anatinus
ENSTRUG00000009483	farsb	64	76.252	ENSOCUG00000007828	FARSB	94	76.252	Oryctolagus_cuniculus
ENSTRUG00000009483	farsb	100	82.979	ENSORLG00000009135	farsb	100	84.041	Oryzias_latipes
ENSTRUG00000009483	farsb	100	82.624	ENSORLG00015001072	farsb	100	82.723	Oryzias_latipes_hsok
ENSTRUG00000009483	farsb	100	83.097	ENSOMEG00000019009	farsb	100	83.097	Oryzias_melastigma
ENSTRUG00000009483	farsb	70	70.234	ENSOGAG00000010125	FARSB	100	70.234	Otolemur_garnettii
ENSTRUG00000009483	farsb	70	75.593	ENSOARG00000020329	FARSB	100	75.593	Ovis_aries
ENSTRUG00000009483	farsb	70	75.593	ENSPPAG00000039268	FARSB	100	75.593	Pan_paniscus
ENSTRUG00000009483	farsb	70	75.763	ENSPPRG00000010687	FARSB	100	75.763	Panthera_pardus
ENSTRUG00000009483	farsb	70	75.424	ENSPTIG00000004299	FARSB	100	75.424	Panthera_tigris_altaica
ENSTRUG00000009483	farsb	70	75.593	ENSPTRG00000012974	FARSB	100	75.593	Pan_troglodytes
ENSTRUG00000009483	farsb	70	75.593	ENSPANG00000016304	FARSB	100	75.593	Papio_anubis
ENSTRUG00000009483	farsb	70	78.778	ENSPKIG00000006661	farsb	100	78.778	Paramormyrops_kingsleyae
ENSTRUG00000009483	farsb	69	75.639	ENSPSIG00000006248	FARSB	99	75.639	Pelodiscus_sinensis
ENSTRUG00000009483	farsb	58	83.640	ENSPMGG00000002815	farsb	100	83.640	Periophthalmus_magnuspinnatus
ENSTRUG00000009483	farsb	70	75.424	ENSPEMG00000003131	Farsb	100	75.424	Peromyscus_maniculatus_bairdii
ENSTRUG00000009483	farsb	70	78.438	ENSPCIG00000019458	FARSB	100	78.438	Phascolarctos_cinereus
ENSTRUG00000009483	farsb	100	81.700	ENSPLAG00000001104	farsb	100	81.700	Poecilia_latipinna
ENSTRUG00000009483	farsb	100	82.172	ENSPMEG00000017658	farsb	100	82.172	Poecilia_mexicana
ENSTRUG00000009483	farsb	100	82.054	ENSPREG00000010583	farsb	100	82.054	Poecilia_reticulata
ENSTRUG00000009483	farsb	70	75.593	ENSPPYG00000013221	FARSB	100	75.593	Pongo_abelii
ENSTRUG00000009483	farsb	59	66.800	ENSPCAG00000002757	FARSB	85	66.800	Procavia_capensis
ENSTRUG00000009483	farsb	70	76.102	ENSPVAG00000006985	FARSB	100	76.102	Pteropus_vampyrus
ENSTRUG00000009483	farsb	70	74.024	ENSPNYG00000011433	farsb	100	74.024	Pundamilia_nyererei
ENSTRUG00000009483	farsb	70	81.154	ENSPNAG00000021802	farsb	100	81.154	Pygocentrus_nattereri
ENSTRUG00000009483	farsb	70	75.932	ENSRNOG00000014119	Farsb	100	75.932	Rattus_norvegicus
ENSTRUG00000009483	farsb	64	75.506	ENSRBIG00000033191	FARSB	98	75.046	Rhinopithecus_bieti
ENSTRUG00000009483	farsb	70	75.424	ENSRROG00000029388	FARSB	100	75.424	Rhinopithecus_roxellana
ENSTRUG00000009483	farsb	70	44.098	YLR060W	FRS1	100	44.098	Saccharomyces_cerevisiae
ENSTRUG00000009483	farsb	70	68.475	ENSSBOG00000019084	FARSB	100	68.475	Saimiri_boliviensis_boliviensis
ENSTRUG00000009483	farsb	64	72.212	ENSSHAG00000015752	FARSB	99	72.212	Sarcophilus_harrisii
ENSTRUG00000009483	farsb	70	77.589	ENSSFOG00015007850	farsb	100	77.589	Scleropages_formosus
ENSTRUG00000009483	farsb	100	83.412	ENSSMAG00000020668	farsb	100	85.059	Scophthalmus_maximus
ENSTRUG00000009483	farsb	98	84.487	ENSSDUG00000009685	farsb	100	84.487	Seriola_dumerili
ENSTRUG00000009483	farsb	100	84.235	ENSSLDG00000025206	farsb	100	84.038	Seriola_lalandi_dorsalis
ENSTRUG00000009483	farsb	66	70.945	ENSSPUG00000002245	FARSB	100	70.945	Sphenodon_punctatus
ENSTRUG00000009483	farsb	100	85.395	ENSSPAG00000007367	farsb	100	85.395	Stegastes_partitus
ENSTRUG00000009483	farsb	70	74.915	ENSSSCG00000016226	-	100	74.915	Sus_scrofa
ENSTRUG00000009483	farsb	70	69.492	ENSSSCG00000032016	-	100	69.492	Sus_scrofa
ENSTRUG00000009483	farsb	67	73.462	ENSTGUG00000007788	FARSB	99	73.462	Taeniopygia_guttata
ENSTRUG00000009483	farsb	70	94.567	ENSTNIG00000014310	farsb	100	94.567	Tetraodon_nigroviridis
ENSTRUG00000009483	farsb	70	52.542	ENSTBEG00000003136	FARSB	100	52.542	Tupaia_belangeri
ENSTRUG00000009483	farsb	61	75.879	ENSTTRG00000009082	FARSB	88	75.879	Tursiops_truncatus
ENSTRUG00000009483	farsb	59	71.257	ENSUAMG00000024613	FARSB	99	71.257	Ursus_americanus
ENSTRUG00000009483	farsb	70	75.932	ENSUMAG00000017995	FARSB	100	75.932	Ursus_maritimus
ENSTRUG00000009483	farsb	64	72.140	ENSVPAG00000006844	FARSB	100	72.140	Vicugna_pacos
ENSTRUG00000009483	farsb	70	76.102	ENSVVUG00000024025	FARSB	100	76.102	Vulpes_vulpes
ENSTRUG00000009483	farsb	70	76.271	ENSXETG00000002934	farsb	100	76.271	Xenopus_tropicalis
ENSTRUG00000009483	farsb	100	81.464	ENSXMAG00000008280	farsb	100	81.464	Xiphophorus_maculatus