EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000009880 (Gene tree)
Gene ID: 101070621
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3655 bases
Position: chrHE591944.1:10104-13758
Accession: 101070621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000024808	RtcB	PF01139.17	4.2e-146	1	1
ENSTRUP00000052203	RtcB	PF01139.17	1.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000057307	-	498	-	ENSTRUP00000052203	165 (aa)	-	-
ENSTRUT00000024909	-	1889	XM_003976372	ENSTRUP00000024808	459 (aa)	XP_003976421	H2TJF4

Gene Model

Click here to download ENSTRUG00000009880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000009880's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000009880	rtcb	100	95.435	ENSG00000100220	RTCB	91	95.435	Homo_sapiens
ENSTRUG00000009880	rtcb	100	98.261	ENSAPOG00000006040	rtcb	91	98.261	Acanthochromis_polyacanthus
ENSTRUG00000009880	rtcb	100	95.435	ENSAMEG00000016152	RTCB	91	95.435	Ailuropoda_melanoleuca
ENSTRUG00000009880	rtcb	100	92.593	ENSACIG00000009083	rtcb	91	92.593	Amphilophus_citrinellus
ENSTRUG00000009880	rtcb	100	98.043	ENSAOCG00000005662	rtcb	100	98.043	Amphiprion_ocellaris
ENSTRUG00000009880	rtcb	100	98.043	ENSAPEG00000024701	rtcb	91	98.043	Amphiprion_percula
ENSTRUG00000009880	rtcb	100	93.913	ENSAPEG00000024653	rtcb	94	93.913	Amphiprion_percula
ENSTRUG00000009880	rtcb	100	97.174	ENSATEG00000000618	rtcb	91	97.174	Anabas_testudineus
ENSTRUG00000009880	rtcb	100	94.348	ENSACAG00000014817	RTCB	89	94.348	Anolis_carolinensis
ENSTRUG00000009880	rtcb	100	83.735	ENSANAG00000018191	-	83	80.217	Aotus_nancymaae
ENSTRUG00000009880	rtcb	100	92.169	ENSANAG00000023724	-	72	97.222	Aotus_nancymaae
ENSTRUG00000009880	rtcb	100	96.522	ENSACLG00000008367	rtcb	100	96.522	Astatotilapia_calliptera
ENSTRUG00000009880	rtcb	100	96.739	ENSAMXG00000042320	rtcb	91	96.739	Astyanax_mexicanus
ENSTRUG00000009880	rtcb	100	95.435	ENSBTAG00000011070	RTCB	91	95.435	Bos_taurus
ENSTRUG00000009880	rtcb	100	75.652	WBGene00008877	rtcb-1	91	75.652	Caenorhabditis_elegans
ENSTRUG00000009880	rtcb	100	95.435	ENSCJAG00000006128	RTCB	91	95.435	Callithrix_jacchus
ENSTRUG00000009880	rtcb	100	95.435	ENSCAFG00000001785	RTCB	91	95.435	Canis_familiaris
ENSTRUG00000009880	rtcb	100	90.652	ENSCAFG00000010789	-	91	91.087	Canis_familiaris
ENSTRUG00000009880	rtcb	100	95.435	ENSCAFG00020004890	-	91	95.435	Canis_lupus_dingo
ENSTRUG00000009880	rtcb	100	87.952	ENSCAFG00020018953	-	90	91.392	Canis_lupus_dingo
ENSTRUG00000009880	rtcb	100	95.435	ENSCHIG00000027009	-	91	95.435	Capra_hircus
ENSTRUG00000009880	rtcb	50	71.179	ENSCHIG00000017428	-	100	71.179	Capra_hircus
ENSTRUG00000009880	rtcb	100	95.435	ENSTSYG00000012320	RTCB	91	95.435	Carlito_syrichta
ENSTRUG00000009880	rtcb	100	95.217	ENSCAPG00000011647	RTCB	93	95.217	Cavia_aperea
ENSTRUG00000009880	rtcb	100	95.435	ENSCCAG00000000618	RTCB	91	95.435	Cebus_capucinus
ENSTRUG00000009880	rtcb	100	95.217	ENSCATG00000033424	RTCB	91	95.217	Cercocebus_atys
ENSTRUG00000009880	rtcb	100	95.217	ENSCLAG00000007997	RTCB	91	95.217	Chinchilla_lanigera
ENSTRUG00000009880	rtcb	100	95.217	ENSCSAG00000008351	RTCB	91	95.217	Chlorocebus_sabaeus
ENSTRUG00000009880	rtcb	100	80.217	ENSCHOG00000009123	RTCB	91	80.217	Choloepus_hoffmanni
ENSTRUG00000009880	rtcb	100	94.565	ENSCPBG00000023184	RTCB	91	94.565	Chrysemys_picta_bellii
ENSTRUG00000009880	rtcb	100	85.621	ENSCING00000003830	-	91	85.621	Ciona_intestinalis
ENSTRUG00000009880	rtcb	100	85.839	ENSCSAVG00000008124	-	100	82.005	Ciona_savignyi
ENSTRUG00000009880	rtcb	100	91.566	ENSCANG00000001891	RTCB	91	91.087	Colobus_angolensis_palliatus
ENSTRUG00000009880	rtcb	100	95.217	ENSCGRG00001011173	Rtcb	91	95.217	Cricetulus_griseus_chok1gshd
ENSTRUG00000009880	rtcb	100	95.435	ENSCGRG00000009587	-	94	95.435	Cricetulus_griseus_crigri
ENSTRUG00000009880	rtcb	100	96.957	ENSCSEG00000003986	rtcb	91	96.957	Cynoglossus_semilaevis
ENSTRUG00000009880	rtcb	91	95.192	ENSCVAG00000000569	rtcb	95	95.192	Cyprinodon_variegatus
ENSTRUG00000009880	rtcb	100	97.174	ENSDARG00000101047	rtcb	91	97.174	Danio_rerio
ENSTRUG00000009880	rtcb	100	92.169	ENSDNOG00000012425	RTCB	89	91.160	Dasypus_novemcinctus
ENSTRUG00000009880	rtcb	100	94.783	ENSDORG00000010855	Rtcb	91	94.783	Dipodomys_ordii
ENSTRUG00000009880	rtcb	100	86.304	FBgn0032781	RtcB	91	86.304	Drosophila_melanogaster
ENSTRUG00000009880	rtcb	100	89.759	ENSETEG00000001988	RTCB	91	88.696	Echinops_telfairi
ENSTRUG00000009880	rtcb	100	87.952	ENSEBUG00000014235	rtcb	91	86.522	Eptatretus_burgeri
ENSTRUG00000009880	rtcb	100	95.435	ENSEASG00005019059	RTCB	91	95.435	Equus_asinus_asinus
ENSTRUG00000009880	rtcb	100	95.435	ENSECAG00000023998	RTCB	91	95.435	Equus_caballus
ENSTRUG00000009880	rtcb	97	86.130	ENSEEUG00000006251	RTCB	100	86.130	Erinaceus_europaeus
ENSTRUG00000009880	rtcb	100	90.964	ENSELUG00000009275	rtcb	91	82.851	Esox_lucius
ENSTRUG00000009880	rtcb	100	95.435	ENSFCAG00000026480	RTCB	91	95.435	Felis_catus
ENSTRUG00000009880	rtcb	100	95.217	ENSFALG00000013334	RTCB	91	95.217	Ficedula_albicollis
ENSTRUG00000009880	rtcb	100	95.435	ENSFDAG00000018150	RTCB	91	95.435	Fukomys_damarensis
ENSTRUG00000009880	rtcb	100	97.174	ENSFHEG00000009595	rtcb	91	97.174	Fundulus_heteroclitus
ENSTRUG00000009880	rtcb	100	94.348	ENSGMOG00000018882	rtcb	91	94.348	Gadus_morhua
ENSTRUG00000009880	rtcb	100	95.000	ENSGALG00000012611	RTCB	91	95.000	Gallus_gallus
ENSTRUG00000009880	rtcb	100	97.174	ENSGAFG00000004198	rtcb	91	97.174	Gambusia_affinis
ENSTRUG00000009880	rtcb	100	96.739	ENSGACG00000000586	rtcb	91	96.739	Gasterosteus_aculeatus
ENSTRUG00000009880	rtcb	100	86.747	ENSGAGG00000019133	RTCB	88	94.118	Gopherus_agassizii
ENSTRUG00000009880	rtcb	100	95.435	ENSGGOG00000011402	RTCB	91	95.435	Gorilla_gorilla
ENSTRUG00000009880	rtcb	100	96.522	ENSHBUG00000020571	rtcb	91	96.522	Haplochromis_burtoni
ENSTRUG00000009880	rtcb	99	67.904	ENSHGLG00000001066	-	97	67.904	Heterocephalus_glaber_female
ENSTRUG00000009880	rtcb	100	95.435	ENSHGLG00000004492	RTCB	91	95.435	Heterocephalus_glaber_female
ENSTRUG00000009880	rtcb	100	95.435	ENSHGLG00100008965	RTCB	91	95.435	Heterocephalus_glaber_male
ENSTRUG00000009880	rtcb	100	94.805	ENSHCOG00000006450	rtcb	91	94.805	Hippocampus_comes
ENSTRUG00000009880	rtcb	100	96.304	ENSIPUG00000015443	rtcb	91	96.304	Ictalurus_punctatus
ENSTRUG00000009880	rtcb	100	95.217	ENSSTOG00000003878	RTCB	91	95.217	Ictidomys_tridecemlineatus
ENSTRUG00000009880	rtcb	100	95.435	ENSJJAG00000010667	Rtcb	91	95.435	Jaculus_jaculus
ENSTRUG00000009880	rtcb	100	97.609	ENSKMAG00000013178	rtcb	91	97.609	Kryptolebias_marmoratus
ENSTRUG00000009880	rtcb	100	96.304	ENSLBEG00000000214	rtcb	91	96.304	Labrus_bergylta
ENSTRUG00000009880	rtcb	100	97.609	ENSLBEG00000010566	RTCB	91	97.609	Labrus_bergylta
ENSTRUG00000009880	rtcb	100	95.435	ENSLACG00000013033	RTCB	91	95.435	Latimeria_chalumnae
ENSTRUG00000009880	rtcb	100	96.522	ENSLOCG00000016515	rtcb	91	96.522	Lepisosteus_oculatus
ENSTRUG00000009880	rtcb	100	94.783	ENSLAFG00000002082	RTCB	91	94.783	Loxodonta_africana
ENSTRUG00000009880	rtcb	100	95.217	ENSMFAG00000034419	RTCB	91	95.217	Macaca_fascicularis
ENSTRUG00000009880	rtcb	100	95.217	ENSMMUG00000006720	RTCB	91	95.217	Macaca_mulatta
ENSTRUG00000009880	rtcb	100	95.217	ENSMNEG00000040669	RTCB	91	95.217	Macaca_nemestrina
ENSTRUG00000009880	rtcb	100	95.217	ENSMLEG00000040505	RTCB	91	95.217	Mandrillus_leucophaeus
ENSTRUG00000009880	rtcb	100	97.174	ENSMAMG00000020676	rtcb	91	97.174	Mastacembelus_armatus
ENSTRUG00000009880	rtcb	100	96.522	ENSMZEG00005018942	rtcb	91	96.522	Maylandia_zebra
ENSTRUG00000009880	rtcb	100	94.589	ENSMGAG00000012805	RTCB	91	94.589	Meleagris_gallopavo
ENSTRUG00000009880	rtcb	81	93.333	ENSMAUG00000008301	Rtcb	95	99.115	Mesocricetus_auratus
ENSTRUG00000009880	rtcb	100	95.435	ENSMICG00000013303	-	91	95.435	Microcebus_murinus
ENSTRUG00000009880	rtcb	100	76.739	ENSMICG00000036677	-	91	75.870	Microcebus_murinus
ENSTRUG00000009880	rtcb	100	95.652	ENSMOCG00000002440	Rtcb	91	95.652	Microtus_ochrogaster
ENSTRUG00000009880	rtcb	100	97.826	ENSMMOG00000005987	rtcb	91	97.826	Mola_mola
ENSTRUG00000009880	rtcb	100	95.217	ENSMODG00000001414	RTCB	91	95.217	Monodelphis_domestica
ENSTRUG00000009880	rtcb	100	97.609	ENSMALG00000007603	rtcb	91	97.609	Monopterus_albus
ENSTRUG00000009880	rtcb	100	95.435	MGP_CAROLIEiJ_G0015689	Rtcb	91	95.435	Mus_caroli
ENSTRUG00000009880	rtcb	100	95.435	ENSMUSG00000001783	Rtcb	91	95.435	Mus_musculus
ENSTRUG00000009880	rtcb	100	95.435	MGP_PahariEiJ_G0031396	Rtcb	91	95.435	Mus_pahari
ENSTRUG00000009880	rtcb	100	95.435	MGP_SPRETEiJ_G0016507	Rtcb	91	95.435	Mus_spretus
ENSTRUG00000009880	rtcb	100	95.435	ENSMPUG00000012285	RTCB	91	95.435	Mustela_putorius_furo
ENSTRUG00000009880	rtcb	100	93.478	ENSMLUG00000007803	RTCB	91	93.478	Myotis_lucifugus
ENSTRUG00000009880	rtcb	100	93.373	ENSNGAG00000005093	Rtcb	87	98.667	Nannospalax_galili
ENSTRUG00000009880	rtcb	100	96.739	ENSNBRG00000017202	rtcb	91	96.739	Neolamprologus_brichardi
ENSTRUG00000009880	rtcb	100	95.435	ENSNLEG00000004960	RTCB	91	95.435	Nomascus_leucogenys
ENSTRUG00000009880	rtcb	85	78.517	ENSMEUG00000007809	-	77	78.517	Notamacropus_eugenii
ENSTRUG00000009880	rtcb	100	92.169	ENSOPRG00000003488	RTCB	69	97.500	Ochotona_princeps
ENSTRUG00000009880	rtcb	100	62.174	ENSODEG00000005042	-	89	62.174	Octodon_degus
ENSTRUG00000009880	rtcb	87	99.057	ENSODEG00000013033	-	96	99.057	Octodon_degus
ENSTRUG00000009880	rtcb	100	98.043	ENSONIG00000007474	rtcb	91	98.043	Oreochromis_niloticus
ENSTRUG00000009880	rtcb	100	95.000	ENSOANG00000005524	RTCB	91	95.000	Ornithorhynchus_anatinus
ENSTRUG00000009880	rtcb	100	92.169	ENSOCUG00000008270	RTCB	87	94.824	Oryctolagus_cuniculus
ENSTRUG00000009880	rtcb	100	96.957	ENSORLG00000020093	rtcb	91	96.957	Oryzias_latipes
ENSTRUG00000009880	rtcb	100	96.957	ENSORLG00020003706	rtcb	96	96.957	Oryzias_latipes_hni
ENSTRUG00000009880	rtcb	100	97.174	ENSORLG00015002968	rtcb	91	97.174	Oryzias_latipes_hsok
ENSTRUG00000009880	rtcb	100	96.739	ENSOMEG00000021278	rtcb	91	96.739	Oryzias_melastigma
ENSTRUG00000009880	rtcb	100	94.783	ENSOGAG00000001425	RTCB	91	94.783	Otolemur_garnettii
ENSTRUG00000009880	rtcb	100	95.435	ENSOARG00000018008	RTCB	91	95.435	Ovis_aries
ENSTRUG00000009880	rtcb	100	95.435	ENSPPAG00000028667	RTCB	91	95.435	Pan_paniscus
ENSTRUG00000009880	rtcb	100	95.435	ENSPPRG00000004038	RTCB	91	95.435	Panthera_pardus
ENSTRUG00000009880	rtcb	100	90.652	ENSPTIG00000020499	RTCB	94	91.739	Panthera_tigris_altaica
ENSTRUG00000009880	rtcb	100	95.435	ENSPTRG00000014287	RTCB	91	95.435	Pan_troglodytes
ENSTRUG00000009880	rtcb	100	95.217	ENSPANG00000016035	RTCB	91	95.217	Papio_anubis
ENSTRUG00000009880	rtcb	100	96.522	ENSPKIG00000001881	rtcb	91	96.522	Paramormyrops_kingsleyae
ENSTRUG00000009880	rtcb	100	94.348	ENSPSIG00000011690	RTCB	100	94.348	Pelodiscus_sinensis
ENSTRUG00000009880	rtcb	100	96.957	ENSPMGG00000016672	rtcb	91	96.957	Periophthalmus_magnuspinnatus
ENSTRUG00000009880	rtcb	100	95.435	ENSPEMG00000019548	Rtcb	91	95.435	Peromyscus_maniculatus_bairdii
ENSTRUG00000009880	rtcb	100	92.174	ENSPMAG00000005657	rtcb	91	92.174	Petromyzon_marinus
ENSTRUG00000009880	rtcb	100	95.217	ENSPCIG00000009467	RTCB	91	95.217	Phascolarctos_cinereus
ENSTRUG00000009880	rtcb	100	97.609	ENSPFOG00000003058	rtcb	91	97.609	Poecilia_formosa
ENSTRUG00000009880	rtcb	100	97.391	ENSPLAG00000017663	rtcb	91	97.391	Poecilia_latipinna
ENSTRUG00000009880	rtcb	100	97.609	ENSPMEG00000006227	rtcb	91	97.609	Poecilia_mexicana
ENSTRUG00000009880	rtcb	100	97.391	ENSPREG00000018467	rtcb	91	97.391	Poecilia_reticulata
ENSTRUG00000009880	rtcb	100	95.435	ENSPPYG00000011752	RTCB	91	95.435	Pongo_abelii
ENSTRUG00000009880	rtcb	99	92.727	ENSPCAG00000013641	RTCB	90	76.581	Procavia_capensis
ENSTRUG00000009880	rtcb	100	95.435	ENSPCOG00000017243	RTCB	91	95.435	Propithecus_coquereli
ENSTRUG00000009880	rtcb	100	92.121	ENSPVAG00000002380	RTCB	90	94.575	Pteropus_vampyrus
ENSTRUG00000009880	rtcb	100	96.522	ENSPNYG00000022760	rtcb	91	96.522	Pundamilia_nyererei
ENSTRUG00000009880	rtcb	100	96.739	ENSPNAG00000009209	rtcb	91	96.739	Pygocentrus_nattereri
ENSTRUG00000009880	rtcb	100	95.435	ENSRNOG00000004813	Rtcb	91	95.435	Rattus_norvegicus
ENSTRUG00000009880	rtcb	100	86.334	ENSRBIG00000042090	RTCB	91	86.334	Rhinopithecus_bieti
ENSTRUG00000009880	rtcb	99	91.485	ENSSBOG00000020085	-	92	91.485	Saimiri_boliviensis_boliviensis
ENSTRUG00000009880	rtcb	100	95.435	ENSSHAG00000016277	RTCB	97	95.435	Sarcophilus_harrisii
ENSTRUG00000009880	rtcb	100	98.043	ENSSFOG00015000763	rtcb	91	98.043	Scleropages_formosus
ENSTRUG00000009880	rtcb	100	94.783	ENSSFOG00015011572	RTCB	91	94.783	Scleropages_formosus
ENSTRUG00000009880	rtcb	100	93.913	ENSSMAG00000005096	rtcb	91	93.913	Scophthalmus_maximus
ENSTRUG00000009880	rtcb	100	96.739	ENSSDUG00000012605	rtcb	91	96.739	Seriola_dumerili
ENSTRUG00000009880	rtcb	100	96.739	ENSSLDG00000019458	rtcb	91	96.739	Seriola_lalandi_dorsalis
ENSTRUG00000009880	rtcb	69	100.000	ENSSARG00000004799	-	68	100.000	Sorex_araneus
ENSTRUG00000009880	rtcb	100	94.565	ENSSPUG00000012814	RTCB	91	94.565	Sphenodon_punctatus
ENSTRUG00000009880	rtcb	100	98.043	ENSSPAG00000004623	rtcb	91	98.043	Stegastes_partitus
ENSTRUG00000009880	rtcb	100	95.435	ENSSSCG00000000158	RTCB	91	95.435	Sus_scrofa
ENSTRUG00000009880	rtcb	100	95.217	ENSTGUG00000010947	RTCB	91	95.217	Taeniopygia_guttata
ENSTRUG00000009880	rtcb	100	97.590	ENSTNIG00000002484	rtcb	91	96.739	Tetraodon_nigroviridis
ENSTRUG00000009880	rtcb	97	86.130	ENSTBEG00000004418	RTCB	88	86.130	Tupaia_belangeri
ENSTRUG00000009880	rtcb	100	90.964	ENSTTRG00000006417	RTCB	90	94.353	Tursiops_truncatus
ENSTRUG00000009880	rtcb	100	95.435	ENSUAMG00000022792	RTCB	91	95.435	Ursus_americanus
ENSTRUG00000009880	rtcb	100	95.435	ENSUMAG00000017225	RTCB	91	95.435	Ursus_maritimus
ENSTRUG00000009880	rtcb	100	95.217	ENSVPAG00000005375	RTCB	91	95.217	Vicugna_pacos
ENSTRUG00000009880	rtcb	100	95.435	ENSVVUG00000023408	RTCB	100	95.332	Vulpes_vulpes
ENSTRUG00000009880	rtcb	100	94.348	ENSXETG00000011523	rtcb	91	94.348	Xenopus_tropicalis
ENSTRUG00000009880	rtcb	50	94.323	ENSXCOG00000011944	rtcb	100	94.323	Xiphophorus_couchianus
ENSTRUG00000009880	rtcb	100	93.373	ENSXCOG00000011942	rtcb	100	93.373	Xiphophorus_couchianus
ENSTRUG00000009880	rtcb	100	97.391	ENSXMAG00000002855	rtcb	91	97.391	Xiphophorus_maculatus