EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000009903 (Gene tree)
Gene ID: 101062381
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 1261 bases
Position: chr1:11986705-11987965
Accession: 101062381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000024884	MMR_HSR1	PF01926.23	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000024986	-	972	XM_003961648	ENSTRUP00000024884	234 (aa)	XP_003961697	H2TJN0

Gene Model

Click here to download ENSTRUG00000009903's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru04140	Autophagy - animal	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000009903's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000009903	zgc:101559	71	31.737	ENSTRUG00000008939	nkiras1	85	31.737
ENSTRUG00000009903	zgc:101559	78	40.000	ENSTRUG00000024368	rab5aa	80	40.000
ENSTRUG00000009903	zgc:101559	88	40.976	ENSTRUG00000020633	rab35b	99	40.976
ENSTRUG00000009903	zgc:101559	71	37.349	ENSTRUG00000018380	rab22a	83	37.349
ENSTRUG00000009903	zgc:101559	74	38.506	ENSTRUG00000007556	rab11al	90	39.726
ENSTRUG00000009903	zgc:101559	63	42.857	ENSTRUG00000004984	rab18a	71	42.857
ENSTRUG00000009903	zgc:101559	72	41.071	ENSTRUG00000003363	rab2a	85	41.718
ENSTRUG00000009903	zgc:101559	65	33.775	ENSTRUG00000015697	rab23	71	34.459
ENSTRUG00000009903	zgc:101559	76	40.223	ENSTRUG00000022029	rab11bb	81	40.223
ENSTRUG00000009903	zgc:101559	51	41.463	ENSTRUG00000005937	rab34a	54	41.463
ENSTRUG00000009903	zgc:101559	81	30.102	ENSTRUG00000021970	rasl11b	77	30.102
ENSTRUG00000009903	zgc:101559	84	31.500	ENSTRUG00000013963	RAB9A	97	31.500
ENSTRUG00000009903	zgc:101559	63	38.667	ENSTRUG00000008698	rab9a	74	38.667
ENSTRUG00000009903	zgc:101559	72	39.286	ENSTRUG00000011399	-	76	39.286
ENSTRUG00000009903	zgc:101559	80	39.362	ENSTRUG00000020792	rab11a	87	39.362
ENSTRUG00000009903	zgc:101559	77	42.778	ENSTRUG00000025076	si:dkey-16l2.16	92	40.000
ENSTRUG00000009903	zgc:101559	90	37.264	ENSTRUG00000024177	rab13	99	37.264
ENSTRUG00000009903	zgc:101559	71	31.737	ENSTRUG00000013749	ran	74	31.737
ENSTRUG00000009903	zgc:101559	86	42.857	ENSTRUG00000024994	RAB1A	95	42.857
ENSTRUG00000009903	zgc:101559	71	34.132	ENSTRUG00000023449	kras	90	34.637
ENSTRUG00000009903	zgc:101559	78	45.355	ENSTRUG00000004287	rab1ba	86	45.355
ENSTRUG00000009903	zgc:101559	63	42.177	ENSTRUG00000004283	rab18b	93	36.735
ENSTRUG00000009903	zgc:101559	66	43.871	ENSTRUG00000025018	rab39bb	72	43.871
ENSTRUG00000009903	zgc:101559	63	42.857	ENSTRUG00000023252	rab6a	70	42.857
ENSTRUG00000009903	zgc:101559	85	37.374	ENSTRUG00000009223	rab41	91	37.374
ENSTRUG00000009903	zgc:101559	69	33.540	ENSTRUG00000005805	mras	81	34.682
ENSTRUG00000009903	zgc:101559	89	42.381	ENSTRUG00000023164	rab1ab	99	42.381
ENSTRUG00000009903	zgc:101559	76	39.665	ENSTRUG00000021619	-	82	39.665
ENSTRUG00000009903	zgc:101559	76	39.665	ENSTRUG00000021614	-	81	39.665
ENSTRUG00000009903	zgc:101559	73	39.080	ENSTRUG00000015590	rab5c	75	39.080
ENSTRUG00000009903	zgc:101559	76	48.315	ENSTRUG00000022559	rab30	83	48.315
ENSTRUG00000009903	zgc:101559	63	42.177	ENSTRUG00000017824	rab15	68	42.177
ENSTRUG00000009903	zgc:101559	65	35.948	ENSTRUG00000004902	rheb	82	35.948
ENSTRUG00000009903	zgc:101559	70	31.138	ENSTRUG00000023427	dnajc27	61	31.138
ENSTRUG00000009903	zgc:101559	85	40.196	ENSTRUG00000024455	rab12	82	40.196
ENSTRUG00000009903	zgc:101559	87	56.373	ENSTRUG00000020335	rab33a	79	56.373
ENSTRUG00000009903	zgc:101559	70	39.412	ENSTRUG00000010082	RAB7A	79	39.412
ENSTRUG00000009903	zgc:101559	78	30.303	ENSTRUG00000022951	rab20	71	30.303
ENSTRUG00000009903	zgc:101559	63	42.177	ENSTRUG00000014783	RAB15	68	42.177
ENSTRUG00000009903	zgc:101559	65	33.553	ENSTRUG00000020012	rhebl1	82	33.553
ENSTRUG00000009903	zgc:101559	70	39.412	ENSTRUG00000020093	-	79	39.412
ENSTRUG00000009903	zgc:101559	63	40.816	ENSTRUG00000004881	rab6bb	70	40.816
ENSTRUG00000009903	zgc:101559	69	32.370	ENSTRUG00000008651	rasl11a	64	32.370
ENSTRUG00000009903	zgc:101559	67	30.573	ENSTRUG00000012454	rabl2	67	30.573
ENSTRUG00000009903	zgc:101559	69	34.568	ENSTRUG00000024825	hrasb	89	35.057
ENSTRUG00000009903	zgc:101559	68	38.750	ENSTRUG00000014595	-	75	38.750
ENSTRUG00000009903	zgc:101559	82	35.233	ENSTRUG00000007504	rab25b	90	35.233
ENSTRUG00000009903	zgc:101559	63	43.919	ENSTRUG00000010224	rab42a	67	43.919
ENSTRUG00000009903	zgc:101559	79	59.898	ENSTRUG00000007036	rab33ba	82	59.898

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000009903	zgc:101559	100	80.342	ENSAPOG00000007503	zgc:101559	100	80.342	Acanthochromis_polyacanthus
ENSTRUG00000009903	zgc:101559	88	84.541	ENSACIG00000021459	zgc:101559	91	84.541	Amphilophus_citrinellus
ENSTRUG00000009903	zgc:101559	100	80.769	ENSAOCG00000024675	zgc:101559	100	80.769	Amphiprion_ocellaris
ENSTRUG00000009903	zgc:101559	100	80.769	ENSAPEG00000005176	zgc:101559	100	80.769	Amphiprion_percula
ENSTRUG00000009903	zgc:101559	100	79.060	ENSATEG00000007761	zgc:101559	100	79.060	Anabas_testudineus
ENSTRUG00000009903	zgc:101559	97	82.456	ENSACLG00000027006	zgc:101559	97	82.456	Astatotilapia_calliptera
ENSTRUG00000009903	zgc:101559	100	71.064	ENSAMXG00000040460	zgc:101559	94	71.064	Astyanax_mexicanus
ENSTRUG00000009903	zgc:101559	100	75.641	ENSCSEG00000006243	zgc:101559	100	75.641	Cynoglossus_semilaevis
ENSTRUG00000009903	zgc:101559	100	80.342	ENSCVAG00000019227	zgc:101559	100	80.342	Cyprinodon_variegatus
ENSTRUG00000009903	zgc:101559	100	72.650	ENSDARG00000003257	zgc:101559	100	72.650	Danio_rerio
ENSTRUG00000009903	zgc:101559	100	78.632	ENSFHEG00000011483	zgc:101559	100	78.632	Fundulus_heteroclitus
ENSTRUG00000009903	zgc:101559	91	78.302	ENSGMOG00000011665	zgc:101559	99	78.302	Gadus_morhua
ENSTRUG00000009903	zgc:101559	100	78.632	ENSGAFG00000021202	zgc:101559	100	78.632	Gambusia_affinis
ENSTRUG00000009903	zgc:101559	91	78.774	ENSGACG00000001725	zgc:101559	91	78.774	Gasterosteus_aculeatus
ENSTRUG00000009903	zgc:101559	100	81.624	ENSHBUG00000007827	zgc:101559	100	81.624	Haplochromis_burtoni
ENSTRUG00000009903	zgc:101559	100	72.458	ENSHCOG00000009133	zgc:101559	100	73.950	Hippocampus_comes
ENSTRUG00000009903	zgc:101559	100	67.949	ENSIPUG00000022394	zgc:101559	100	67.949	Ictalurus_punctatus
ENSTRUG00000009903	zgc:101559	100	76.170	ENSKMAG00000002862	zgc:101559	100	76.170	Kryptolebias_marmoratus
ENSTRUG00000009903	zgc:101559	100	83.333	ENSLBEG00000025798	zgc:101559	100	83.333	Labrus_bergylta
ENSTRUG00000009903	zgc:101559	85	67.500	ENSLACG00000011557	zgc:101559	86	67.500	Latimeria_chalumnae
ENSTRUG00000009903	zgc:101559	99	66.667	ENSLOCG00000005904	zgc:101559	99	66.667	Lepisosteus_oculatus
ENSTRUG00000009903	zgc:101559	100	81.197	ENSMAMG00000017431	zgc:101559	100	81.197	Mastacembelus_armatus
ENSTRUG00000009903	zgc:101559	100	81.624	ENSMZEG00005021778	zgc:101559	100	81.624	Maylandia_zebra
ENSTRUG00000009903	zgc:101559	100	84.188	ENSMMOG00000019779	zgc:101559	100	84.188	Mola_mola
ENSTRUG00000009903	zgc:101559	100	76.923	ENSMALG00000003712	zgc:101559	100	76.923	Monopterus_albus
ENSTRUG00000009903	zgc:101559	100	80.769	ENSNBRG00000002684	zgc:101559	100	80.769	Neolamprologus_brichardi
ENSTRUG00000009903	zgc:101559	100	81.624	ENSONIG00000006715	-	100	81.624	Oreochromis_niloticus
ENSTRUG00000009903	zgc:101559	100	79.060	ENSORLG00000030642	zgc:101559	100	79.060	Oryzias_latipes
ENSTRUG00000009903	zgc:101559	100	78.632	ENSORLG00020012685	zgc:101559	100	78.632	Oryzias_latipes_hni
ENSTRUG00000009903	zgc:101559	100	79.487	ENSORLG00015016047	zgc:101559	100	79.487	Oryzias_latipes_hsok
ENSTRUG00000009903	zgc:101559	100	80.769	ENSOMEG00000013128	zgc:101559	100	80.769	Oryzias_melastigma
ENSTRUG00000009903	zgc:101559	88	73.171	ENSPKIG00000013397	zgc:101559	86	73.171	Paramormyrops_kingsleyae
ENSTRUG00000009903	zgc:101559	100	82.479	ENSPFOG00000009101	-	100	82.479	Poecilia_formosa
ENSTRUG00000009903	zgc:101559	100	82.479	ENSPLAG00000020627	zgc:101559	100	82.479	Poecilia_latipinna
ENSTRUG00000009903	zgc:101559	100	82.051	ENSPMEG00000010152	zgc:101559	100	82.051	Poecilia_mexicana
ENSTRUG00000009903	zgc:101559	100	80.342	ENSPREG00000007017	zgc:101559	100	80.342	Poecilia_reticulata
ENSTRUG00000009903	zgc:101559	100	81.624	ENSPNYG00000012922	zgc:101559	100	81.624	Pundamilia_nyererei
ENSTRUG00000009903	zgc:101559	100	72.340	ENSPNAG00000017856	zgc:101559	100	72.340	Pygocentrus_nattereri
ENSTRUG00000009903	zgc:101559	88	74.396	ENSSFOG00015006175	zgc:101559	89	74.396	Scleropages_formosus
ENSTRUG00000009903	zgc:101559	99	80.258	ENSSMAG00000002229	zgc:101559	99	80.258	Scophthalmus_maximus
ENSTRUG00000009903	zgc:101559	100	83.333	ENSSDUG00000008151	zgc:101559	100	83.333	Seriola_dumerili
ENSTRUG00000009903	zgc:101559	100	83.333	ENSSLDG00000019214	zgc:101559	100	83.333	Seriola_lalandi_dorsalis
ENSTRUG00000009903	zgc:101559	100	81.197	ENSSPAG00000006404	zgc:101559	100	81.197	Stegastes_partitus
ENSTRUG00000009903	zgc:101559	93	89.450	ENSTNIG00000015000	zgc:101559	95	87.556	Tetraodon_nigroviridis
ENSTRUG00000009903	zgc:101559	100	80.342	ENSXCOG00000018683	zgc:101559	100	80.342	Xiphophorus_couchianus
ENSTRUG00000009903	zgc:101559	100	80.342	ENSXMAG00000011171	zgc:101559	100	80.342	Xiphophorus_maculatus