EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000010015 (Gene tree)
Gene ID: 101069514
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 8485 bases
Position: chr7:12161655-12170139
Accession: 101069514
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000025196	ResIII	PF04851.15	6.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000025299	-	3129	XM_011605656	ENSTRUP00000025196	938 (aa)	XP_011603958	H2TKJ2

Gene Model

Click here to download ENSTRUG00000010015's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000010015's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000010015	rad54b	57	31.579	ENSTRUG00000014634	ercc6l2	54	31.624
ENSTRUG00000010015	rad54b	53	33.475	ENSTRUG00000000350	hells	59	33.475
ENSTRUG00000010015	rad54b	68	43.598	ENSTRUG00000008410	rad54l	91	43.598

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000010015	rad54b	77	58.470	ENSG00000265817	FSBP	99	58.470	Homo_sapiens
ENSTRUG00000010015	rad54b	99	52.836	ENSG00000197275	RAD54B	99	52.748	Homo_sapiens
ENSTRUG00000010015	rad54b	99	53.765	ENSAMEG00000005834	-	99	53.765	Ailuropoda_melanoleuca
ENSTRUG00000010015	rad54b	89	83.081	ENSACIG00000013005	rad54b	95	83.081	Amphilophus_citrinellus
ENSTRUG00000010015	rad54b	99	77.378	ENSAOCG00000008523	rad54b	100	77.273	Amphiprion_ocellaris
ENSTRUG00000010015	rad54b	99	72.128	ENSAPEG00000001673	rad54b	100	72.234	Amphiprion_percula
ENSTRUG00000010015	rad54b	99	79.936	ENSATEG00000001527	rad54b	100	79.936	Anabas_testudineus
ENSTRUG00000010015	rad54b	99	55.966	ENSAPLG00000014366	-	99	55.274	Anas_platyrhynchos
ENSTRUG00000010015	rad54b	84	60.000	ENSACAG00000003671	-	99	60.000	Anolis_carolinensis
ENSTRUG00000010015	rad54b	69	59.630	ENSANAG00000019528	-	99	59.630	Aotus_nancymaae
ENSTRUG00000010015	rad54b	90	84.060	ENSACLG00000007826	rad54b	93	84.060	Astatotilapia_calliptera
ENSTRUG00000010015	rad54b	83	67.430	ENSAMXG00000039985	rad54b	94	67.257	Astyanax_mexicanus
ENSTRUG00000010015	rad54b	99	53.895	ENSBTAG00000000632	RAD54B	99	53.723	Bos_taurus
ENSTRUG00000010015	rad54b	76	35.561	WBGene00013792	Y116A8C.13	84	35.403	Caenorhabditis_elegans
ENSTRUG00000010015	rad54b	99	53.417	ENSCJAG00000000080	-	99	58.550	Callithrix_jacchus
ENSTRUG00000010015	rad54b	99	54.440	ENSCAFG00000009179	RAD54B	99	53.846	Canis_familiaris
ENSTRUG00000010015	rad54b	99	54.459	ENSCAFG00020012084	-	99	53.846	Canis_lupus_dingo
ENSTRUG00000010015	rad54b	99	54.584	ENSCHIG00000008230	-	99	54.109	Capra_hircus
ENSTRUG00000010015	rad54b	99	54.355	ENSTSYG00000013234	-	99	54.355	Carlito_syrichta
ENSTRUG00000010015	rad54b	99	53.609	ENSCPOG00000011643	-	99	53.609	Cavia_porcellus
ENSTRUG00000010015	rad54b	99	53.277	ENSCCAG00000011754	-	99	58.493	Cebus_capucinus
ENSTRUG00000010015	rad54b	99	52.935	ENSCATG00000030661	-	99	58.767	Cercocebus_atys
ENSTRUG00000010015	rad54b	99	53.333	ENSCLAG00000010476	-	89	59.045	Chinchilla_lanigera
ENSTRUG00000010015	rad54b	99	52.954	ENSCSAG00000012712	-	99	52.743	Chlorocebus_sabaeus
ENSTRUG00000010015	rad54b	99	56.494	ENSCPBG00000003204	-	98	58.199	Chrysemys_picta_bellii
ENSTRUG00000010015	rad54b	84	59.269	ENSCANG00000017939	-	99	59.041	Colobus_angolensis_palliatus
ENSTRUG00000010015	rad54b	99	52.447	ENSCGRG00001020184	Rad54b	89	58.312	Cricetulus_griseus_chok1gshd
ENSTRUG00000010015	rad54b	99	51.423	ENSCGRG00000016752	Rad54b	88	57.179	Cricetulus_griseus_crigri
ENSTRUG00000010015	rad54b	92	78.858	ENSCSEG00000001601	rad54b	99	78.858	Cynoglossus_semilaevis
ENSTRUG00000010015	rad54b	99	73.122	ENSCVAG00000009200	rad54b	100	73.228	Cyprinodon_variegatus
ENSTRUG00000010015	rad54b	99	61.920	ENSDARG00000092134	rad54b	99	68.125	Danio_rerio
ENSTRUG00000010015	rad54b	99	53.750	ENSDNOG00000015535	-	99	53.542	Dasypus_novemcinctus
ENSTRUG00000010015	rad54b	99	54.584	ENSDORG00000002492	Rad54b	99	54.114	Dipodomys_ordii
ENSTRUG00000010015	rad54b	87	56.341	ENSETEG00000010605	-	85	63.378	Echinops_telfairi
ENSTRUG00000010015	rad54b	99	47.152	ENSEBUG00000009104	rad54b	84	52.207	Eptatretus_burgeri
ENSTRUG00000010015	rad54b	83	58.965	ENSEASG00005004021	-	89	58.965	Equus_asinus_asinus
ENSTRUG00000010015	rad54b	99	54.149	ENSECAG00000021949	-	98	53.446	Equus_caballus
ENSTRUG00000010015	rad54b	69	53.548	ENSEEUG00000008056	-	71	53.548	Erinaceus_europaeus
ENSTRUG00000010015	rad54b	99	70.811	ENSELUG00000009287	rad54b	100	70.032	Esox_lucius
ENSTRUG00000010015	rad54b	99	53.481	ENSFCAG00000015513	-	99	59.615	Felis_catus
ENSTRUG00000010015	rad54b	99	54.984	ENSFALG00000005467	-	99	54.984	Ficedula_albicollis
ENSTRUG00000010015	rad54b	99	53.545	ENSFDAG00000020541	-	99	52.954	Fukomys_damarensis
ENSTRUG00000010015	rad54b	88	76.322	ENSFHEG00000014382	rad54b	90	76.562	Fundulus_heteroclitus
ENSTRUG00000010015	rad54b	83	78.715	ENSGMOG00000014774	rad54b	99	78.715	Gadus_morhua
ENSTRUG00000010015	rad54b	99	56.250	ENSGALG00000043597	RAD54B	99	55.333	Gallus_gallus
ENSTRUG00000010015	rad54b	99	76.402	ENSGAFG00000007901	rad54b	99	80.074	Gambusia_affinis
ENSTRUG00000010015	rad54b	99	74.497	ENSGACG00000009128	rad54b	99	74.316	Gasterosteus_aculeatus
ENSTRUG00000010015	rad54b	99	57.128	ENSGAGG00000018747	-	99	57.022	Gopherus_agassizii
ENSTRUG00000010015	rad54b	99	52.687	ENSGGOG00000023516	-	87	58.396	Gorilla_gorilla
ENSTRUG00000010015	rad54b	99	78.814	ENSHBUG00000016017	rad54b	99	78.814	Haplochromis_burtoni
ENSTRUG00000010015	rad54b	99	53.838	ENSHGLG00000008263	RAD54B	86	59.125	Heterocephalus_glaber_female
ENSTRUG00000010015	rad54b	99	53.187	ENSHGLG00100008108	-	86	58.313	Heterocephalus_glaber_male
ENSTRUG00000010015	rad54b	89	77.078	ENSHCOG00000004764	rad54b	99	73.710	Hippocampus_comes
ENSTRUG00000010015	rad54b	99	60.703	ENSIPUG00000018531	rad54b	99	60.165	Ictalurus_punctatus
ENSTRUG00000010015	rad54b	99	52.985	ENSSTOG00000010791	-	86	58.228	Ictidomys_tridecemlineatus
ENSTRUG00000010015	rad54b	99	53.383	ENSJJAG00000010314	Rad54b	86	59.343	Jaculus_jaculus
ENSTRUG00000010015	rad54b	83	80.000	ENSKMAG00000004744	rad54b	91	80.000	Kryptolebias_marmoratus
ENSTRUG00000010015	rad54b	79	63.782	ENSLACG00000000859	-	100	63.782	Latimeria_chalumnae
ENSTRUG00000010015	rad54b	99	63.312	ENSLOCG00000010100	rad54b	99	63.114	Lepisosteus_oculatus
ENSTRUG00000010015	rad54b	84	57.967	ENSLAFG00000015315	-	97	57.967	Loxodonta_africana
ENSTRUG00000010015	rad54b	99	52.935	ENSMFAG00000031629	-	99	58.767	Macaca_fascicularis
ENSTRUG00000010015	rad54b	99	52.935	ENSMMUG00000005659	-	86	58.668	Macaca_mulatta
ENSTRUG00000010015	rad54b	99	52.886	ENSMNEG00000016408	-	87	58.764	Macaca_nemestrina
ENSTRUG00000010015	rad54b	99	53.059	ENSMLEG00000006946	-	87	58.668	Mandrillus_leucophaeus
ENSTRUG00000010015	rad54b	90	81.188	ENSMAMG00000012269	rad54b	98	79.952	Mastacembelus_armatus
ENSTRUG00000010015	rad54b	99	78.814	ENSMZEG00005005281	rad54b	97	83.251	Maylandia_zebra
ENSTRUG00000010015	rad54b	99	55.508	ENSMGAG00000012024	-	90	59.304	Meleagris_gallopavo
ENSTRUG00000010015	rad54b	87	56.770	ENSMAUG00000013586	Rad54b	94	56.770	Mesocricetus_auratus
ENSTRUG00000010015	rad54b	90	56.690	ENSMICG00000000754	-	95	56.974	Microcebus_murinus
ENSTRUG00000010015	rad54b	99	52.842	ENSMOCG00000020035	Rad54b	88	59.264	Microtus_ochrogaster
ENSTRUG00000010015	rad54b	87	81.862	ENSMMOG00000003394	rad54b	94	81.862	Mola_mola
ENSTRUG00000010015	rad54b	84	58.772	ENSMODG00000007343	-	97	58.772	Monodelphis_domestica
ENSTRUG00000010015	rad54b	68	84.735	ENSMALG00000001520	rad54b	100	84.735	Monopterus_albus
ENSTRUG00000010015	rad54b	99	53.178	MGP_CAROLIEiJ_G0025810	Rad54b	99	53.178	Mus_caroli
ENSTRUG00000010015	rad54b	99	53.072	ENSMUSG00000078773	Rad54b	99	53.072	Mus_musculus
ENSTRUG00000010015	rad54b	99	53.029	MGP_PahariEiJ_G0023933	Rad54b	99	52.860	Mus_pahari
ENSTRUG00000010015	rad54b	99	53.602	MGP_SPRETEiJ_G0026758	Rad54b	99	53.602	Mus_spretus
ENSTRUG00000010015	rad54b	83	59.442	ENSMPUG00000008878	-	97	59.442	Mustela_putorius_furo
ENSTRUG00000010015	rad54b	99	54.048	ENSMLUG00000008953	-	99	53.862	Myotis_lucifugus
ENSTRUG00000010015	rad54b	99	53.066	ENSNGAG00000017537	Rad54b	99	53.165	Nannospalax_galili
ENSTRUG00000010015	rad54b	90	83.811	ENSNBRG00000013394	rad54b	99	83.811	Neolamprologus_brichardi
ENSTRUG00000010015	rad54b	99	53.305	ENSNLEG00000003062	-	100	58.266	Nomascus_leucogenys
ENSTRUG00000010015	rad54b	67	63.402	ENSMEUG00000012426	-	69	63.402	Notamacropus_eugenii
ENSTRUG00000010015	rad54b	99	54.228	ENSODEG00000019564	-	99	53.708	Octodon_degus
ENSTRUG00000010015	rad54b	74	72.340	ENSODEG00000002650	-	93	72.340	Octodon_degus
ENSTRUG00000010015	rad54b	99	79.025	ENSONIG00000006067	rad54b	100	79.025	Oreochromis_niloticus
ENSTRUG00000010015	rad54b	80	60.317	ENSOANG00000011348	-	99	60.317	Ornithorhynchus_anatinus
ENSTRUG00000010015	rad54b	99	53.725	ENSOCUG00000016478	-	86	59.673	Oryctolagus_cuniculus
ENSTRUG00000010015	rad54b	99	75.818	ENSORLG00000008918	rad54b	100	83.256	Oryzias_latipes
ENSTRUG00000010015	rad54b	68	83.101	ENSORLG00020012171	rad54b	100	83.101	Oryzias_latipes_hni
ENSTRUG00000010015	rad54b	99	75.079	ENSORLG00015018536	rad54b	100	74.737	Oryzias_latipes_hsok
ENSTRUG00000010015	rad54b	82	80.570	ENSOMEG00000004345	rad54b	100	80.570	Oryzias_melastigma
ENSTRUG00000010015	rad54b	99	52.321	ENSOGAG00000007854	-	99	52.000	Otolemur_garnettii
ENSTRUG00000010015	rad54b	83	60.151	ENSOARG00000007691	-	97	60.151	Ovis_aries
ENSTRUG00000010015	rad54b	99	51.623	ENSPPAG00000029572	-	99	51.420	Pan_paniscus
ENSTRUG00000010015	rad54b	99	53.270	ENSPPRG00000007571	-	99	59.341	Panthera_pardus
ENSTRUG00000010015	rad54b	76	59.203	ENSPTIG00000012670	-	99	59.203	Panthera_tigris_altaica
ENSTRUG00000010015	rad54b	99	52.670	ENSPTRG00000020427	-	99	58.231	Pan_troglodytes
ENSTRUG00000010015	rad54b	99	52.935	ENSPANG00000019566	-	86	58.890	Papio_anubis
ENSTRUG00000010015	rad54b	99	62.712	ENSPKIG00000014974	rad54b	99	62.290	Paramormyrops_kingsleyae
ENSTRUG00000010015	rad54b	99	55.544	ENSPSIG00000002383	-	96	61.490	Pelodiscus_sinensis
ENSTRUG00000010015	rad54b	99	53.545	ENSPEMG00000012133	Rad54b	88	59.316	Peromyscus_maniculatus_bairdii
ENSTRUG00000010015	rad54b	83	59.596	ENSPMAG00000002916	rad54b	98	59.596	Petromyzon_marinus
ENSTRUG00000010015	rad54b	84	59.091	ENSPCIG00000020151	-	92	58.660	Phascolarctos_cinereus
ENSTRUG00000010015	rad54b	99	76.034	ENSPFOG00000023411	rad54b	99	75.928	Poecilia_formosa
ENSTRUG00000010015	rad54b	99	76.277	ENSPLAG00000010430	rad54b	99	75.928	Poecilia_latipinna
ENSTRUG00000010015	rad54b	99	76.246	ENSPMEG00000016873	rad54b	99	79.797	Poecilia_mexicana
ENSTRUG00000010015	rad54b	99	76.818	ENSPREG00000018443	rad54b	99	76.818	Poecilia_reticulata
ENSTRUG00000010015	rad54b	99	52.737	ENSPPYG00000018750	-	86	58.396	Pongo_abelii
ENSTRUG00000010015	rad54b	99	53.545	ENSPCOG00000026845	-	99	58.687	Propithecus_coquereli
ENSTRUG00000010015	rad54b	78	57.852	ENSPVAG00000000261	-	85	57.852	Pteropus_vampyrus
ENSTRUG00000010015	rad54b	84	82.219	ENSPNYG00000018303	rad54b	96	82.219	Pundamilia_nyererei
ENSTRUG00000010015	rad54b	99	61.950	ENSPNAG00000000295	rad54b	99	61.506	Pygocentrus_nattereri
ENSTRUG00000010015	rad54b	99	53.102	ENSRNOG00000039949	Rad54b	88	59.166	Rattus_norvegicus
ENSTRUG00000010015	rad54b	84	59.016	ENSRBIG00000020419	-	86	59.016	Rhinopithecus_bieti
ENSTRUG00000010015	rad54b	84	58.890	ENSRROG00000039897	-	86	58.890	Rhinopithecus_roxellana
ENSTRUG00000010015	rad54b	60	42.258	YBR073W	RDH54	80	37.577	Saccharomyces_cerevisiae
ENSTRUG00000010015	rad54b	99	53.862	ENSSBOG00000028501	-	99	53.439	Saimiri_boliviensis_boliviensis
ENSTRUG00000010015	rad54b	99	53.943	ENSSHAG00000017038	-	86	59.900	Sarcophilus_harrisii
ENSTRUG00000010015	rad54b	61	70.351	ENSSFOG00015008483	rad54b	89	70.351	Scleropages_formosus
ENSTRUG00000010015	rad54b	99	78.730	ENSSMAG00000018659	rad54b	98	81.398	Scophthalmus_maximus
ENSTRUG00000010015	rad54b	97	80.219	ENSSDUG00000001122	rad54b	96	80.219	Seriola_dumerili
ENSTRUG00000010015	rad54b	99	80.529	ENSSLDG00000013787	rad54b	100	80.529	Seriola_lalandi_dorsalis
ENSTRUG00000010015	rad54b	99	55.249	ENSSPUG00000016497	-	99	55.143	Sphenodon_punctatus
ENSTRUG00000010015	rad54b	92	82.061	ENSSPAG00000012800	rad54b	98	82.061	Stegastes_partitus
ENSTRUG00000010015	rad54b	99	53.632	ENSSSCG00000006101	-	97	59.108	Sus_scrofa
ENSTRUG00000010015	rad54b	99	55.335	ENSTGUG00000011880	-	99	55.288	Taeniopygia_guttata
ENSTRUG00000010015	rad54b	99	50.692	ENSTTRG00000006312	-	99	49.947	Tursiops_truncatus
ENSTRUG00000010015	rad54b	99	53.871	ENSUMAG00000016401	-	99	53.871	Ursus_maritimus
ENSTRUG00000010015	rad54b	99	54.207	ENSVPAG00000003157	-	86	60.229	Vicugna_pacos
ENSTRUG00000010015	rad54b	99	47.341	ENSXETG00000025924	rad54b	98	52.854	Xenopus_tropicalis
ENSTRUG00000010015	rad54b	90	80.073	ENSXMAG00000013141	rad54b	94	80.073	Xiphophorus_maculatus