EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000010124 (Gene tree)
Gene ID: 101064232
Gene Symbol: mbd4
Alias: -
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2661 bases
Position: chr3:9859086-9861746
Accession: 101064232
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000025500	MBD	PF01429.19	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000025603	-	1866	XM_011602592	ENSTRUP00000025500	441 (aa)	XP_011600894	H2TLE5

Gene Model

Click here to download ENSTRUG00000010124's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000010124's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000010124	mbd4	53	75.294	ENSG00000129071	MBD4	65	75.294	Homo_sapiens
ENSTRUG00000010124	mbd4	100	56.184	ENSAPOG00000021668	mbd4	100	57.474	Acanthochromis_polyacanthus
ENSTRUG00000010124	mbd4	100	57.263	ENSAOCG00000001157	mbd4	100	58.228	Amphiprion_ocellaris
ENSTRUG00000010124	mbd4	100	57.053	ENSAPEG00000016131	mbd4	100	58.861	Amphiprion_percula
ENSTRUG00000010124	mbd4	100	59.329	ENSATEG00000014594	MBD4	90	59.329	Anabas_testudineus
ENSTRUG00000010124	mbd4	97	48.157	ENSAMXG00000017271	mbd4	95	48.157	Astyanax_mexicanus
ENSTRUG00000010124	mbd4	51	77.059	ENSCGRG00001003507	Mbd4	86	44.075	Cricetulus_griseus_chok1gshd
ENSTRUG00000010124	mbd4	51	77.059	ENSCGRG00000010974	Mbd4	86	44.075	Cricetulus_griseus_crigri
ENSTRUG00000010124	mbd4	81	35.817	ENSDORG00000000902	-	88	35.817	Dipodomys_ordii
ENSTRUG00000010124	mbd4	95	38.085	ENSEBUG00000010816	mbd4	98	38.085	Eptatretus_burgeri
ENSTRUG00000010124	mbd4	82	61.644	ENSELUG00000018483	MBD4	63	61.644	Esox_lucius
ENSTRUG00000010124	mbd4	95	46.947	ENSGMOG00000013830	mbd4	100	46.947	Gadus_morhua
ENSTRUG00000010124	mbd4	97	56.858	ENSGAFG00000016011	mbd4	100	56.858	Gambusia_affinis
ENSTRUG00000010124	mbd4	87	45.641	ENSGACG00000001970	-	85	45.202	Gasterosteus_aculeatus
ENSTRUG00000010124	mbd4	95	42.200	ENSSTOG00000020663	MBD4	86	42.200	Ictidomys_tridecemlineatus
ENSTRUG00000010124	mbd4	96	53.747	ENSKMAG00000015015	mbd4	98	55.361	Kryptolebias_marmoratus
ENSTRUG00000010124	mbd4	100	57.082	ENSLBEG00000005669	MBD4	91	57.082	Labrus_bergylta
ENSTRUG00000010124	mbd4	80	52.703	ENSLOCG00000013054	MBD4	73	52.703	Lepisosteus_oculatus
ENSTRUG00000010124	mbd4	53	74.706	ENSMFAG00000002266	MBD4	84	40.000	Macaca_fascicularis
ENSTRUG00000010124	mbd4	60	44.286	ENSMAMG00000024084	-	81	44.286	Mastacembelus_armatus
ENSTRUG00000010124	mbd4	99	58.969	ENSMALG00000021517	mbd4	92	58.969	Monopterus_albus
ENSTRUG00000010124	mbd4	95	43.522	MGP_CAROLIEiJ_G0028760	Mbd4	86	43.522	Mus_caroli
ENSTRUG00000010124	mbd4	95	43.852	ENSMUSG00000030322	Mbd4	87	43.852	Mus_musculus
ENSTRUG00000010124	mbd4	95	43.967	MGP_PahariEiJ_G0022511	-	86	43.967	Mus_pahari
ENSTRUG00000010124	mbd4	95	43.852	MGP_SPRETEiJ_G0029788	Mbd4	87	43.852	Mus_spretus
ENSTRUG00000010124	mbd4	95	56.608	ENSONIG00000017212	mbd4	99	56.608	Oreochromis_niloticus
ENSTRUG00000010124	mbd4	97	54.120	ENSORLG00000011049	mbd4	99	54.120	Oryzias_latipes
ENSTRUG00000010124	mbd4	97	54.867	ENSORLG00020020013	mbd4	99	54.867	Oryzias_latipes_hni
ENSTRUG00000010124	mbd4	97	54.810	ENSORLG00015015342	mbd4	99	54.810	Oryzias_latipes_hsok
ENSTRUG00000010124	mbd4	98	53.642	ENSOMEG00000008819	mbd4	94	53.642	Oryzias_melastigma
ENSTRUG00000010124	mbd4	95	43.277	ENSOGAG00000010236	MBD4	85	43.277	Otolemur_garnettii
ENSTRUG00000010124	mbd4	98	42.316	ENSPKIG00000012306	MBD4	77	42.316	Paramormyrops_kingsleyae
ENSTRUG00000010124	mbd4	95	58.705	ENSPFOG00000014471	mbd4	98	58.705	Poecilia_formosa
ENSTRUG00000010124	mbd4	72	60.166	ENSSFOG00015016292	mbd4	71	60.166	Scleropages_formosus
ENSTRUG00000010124	mbd4	100	57.537	ENSSMAG00000013958	-	71	57.962	Scophthalmus_maximus
ENSTRUG00000010124	mbd4	100	60.294	ENSSDUG00000001365	mbd4	98	60.294	Seriola_dumerili
ENSTRUG00000010124	mbd4	87	56.563	ENSSLDG00000010295	MBD4	86	56.563	Seriola_lalandi_dorsalis
ENSTRUG00000010124	mbd4	95	75.114	ENSTNIG00000017927	mbd4	100	75.114	Tetraodon_nigroviridis
ENSTRUG00000010124	mbd4	68	61.765	ENSTTRG00000011265	MBD4	52	61.765	Tursiops_truncatus
ENSTRUG00000010124	mbd4	98	43.488	ENSXETG00000026622	mbd4	91	43.488	Xenopus_tropicalis
ENSTRUG00000010124	mbd4	97	57.395	ENSXMAG00000021129	mbd4	100	57.395	Xiphophorus_maculatus