EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000010224 (Gene tree)
Gene ID: 101078618
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 1362 bases
Position: chr12:6159364-6160725
Accession: 101078618
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000025757	MMR_HSR1	PF01926.23	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000025861	-	657	XM_003969106	ENSTRUP00000025757	218 (aa)	XP_003969155	H2TM51

Gene Model

Click here to download ENSTRUG00000010224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000010224's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000010224	rab42a	78	41.860	ENSTRUG00000024455	rab12	70	41.860
ENSTRUG00000010224	rab42a	73	40.491	ENSTRUG00000020335	rab33a	63	40.491
ENSTRUG00000010224	rab42a	74	33.735	ENSTRUG00000010082	RAB7A	79	33.735
ENSTRUG00000010224	rab42a	72	40.385	ENSTRUG00000014783	RAB15	73	40.385
ENSTRUG00000010224	rab42a	77	32.335	ENSTRUG00000020012	rhebl1	88	32.335
ENSTRUG00000010224	rab42a	74	33.735	ENSTRUG00000020093	-	79	33.735
ENSTRUG00000010224	rab42a	97	33.649	ENSTRUG00000004881	rab6bb	94	33.649
ENSTRUG00000010224	rab42a	69	32.450	ENSTRUG00000024825	hrasb	85	31.707
ENSTRUG00000010224	rab42a	80	30.159	ENSTRUG00000008651	rasl11a	71	30.159
ENSTRUG00000010224	rab42a	97	34.123	ENSTRUG00000009223	rab41	93	34.123
ENSTRUG00000010224	rab42a	76	36.145	ENSTRUG00000017384	rras2	81	36.145
ENSTRUG00000010224	rab42a	83	38.889	ENSTRUG00000007504	rab25b	86	38.889
ENSTRUG00000010224	rab42a	75	35.976	ENSTRUG00000024368	rab5aa	75	35.976
ENSTRUG00000010224	rab42a	70	44.444	ENSTRUG00000007036	rab33ba	63	44.444
ENSTRUG00000010224	rab42a	75	42.683	ENSTRUG00000020633	rab35b	80	42.683
ENSTRUG00000010224	rab42a	81	33.523	ENSTRUG00000018380	rab22a	90	33.523
ENSTRUG00000010224	rab42a	84	42.077	ENSTRUG00000007556	rab11al	90	45.000
ENSTRUG00000010224	rab42a	76	40.606	ENSTRUG00000004984	rab18a	80	40.606
ENSTRUG00000010224	rab42a	87	46.316	ENSTRUG00000003363	rab2a	89	46.316
ENSTRUG00000010224	rab42a	67	35.374	ENSTRUG00000015697	rab23	74	34.641
ENSTRUG00000010224	rab42a	85	33.333	ENSTRUG00000004902	rheb	94	33.333
ENSTRUG00000010224	rab42a	84	41.530	ENSTRUG00000022029	rab11bb	83	41.530
ENSTRUG00000010224	rab42a	67	33.557	ENSTRUG00000005937	rab34a	66	33.557
ENSTRUG00000010224	rab42a	76	38.095	ENSTRUG00000013963	RAB9A	83	38.095
ENSTRUG00000010224	rab42a	98	37.850	ENSTRUG00000011399	-	97	37.850
ENSTRUG00000010224	rab42a	93	38.725	ENSTRUG00000020792	rab11a	94	38.725
ENSTRUG00000010224	rab42a	80	42.286	ENSTRUG00000025076	si:dkey-16l2.16	83	50.000
ENSTRUG00000010224	rab42a	78	42.012	ENSTRUG00000024177	rab13	84	42.012
ENSTRUG00000010224	rab42a	75	30.675	ENSTRUG00000013749	ran	73	30.675
ENSTRUG00000010224	rab42a	82	41.573	ENSTRUG00000024994	RAB1A	87	41.573
ENSTRUG00000010224	rab42a	84	41.530	ENSTRUG00000021619	-	84	41.530
ENSTRUG00000010224	rab42a	75	38.323	ENSTRUG00000008698	rab9a	82	38.323
ENSTRUG00000010224	rab42a	73	32.298	ENSTRUG00000023449	kras	98	30.890
ENSTRUG00000010224	rab42a	84	39.674	ENSTRUG00000004287	rab1ba	91	39.674
ENSTRUG00000010224	rab42a	76	41.212	ENSTRUG00000004283	rab18b	80	41.212
ENSTRUG00000010224	rab42a	100	54.128	ENSTRUG00000025018	rab39bb	100	54.128
ENSTRUG00000010224	rab42a	72	39.490	ENSTRUG00000023252	rab6a	75	39.490
ENSTRUG00000010224	rab42a	56	32.000	ENSTRUG00000004035	arl3l2	62	32.000
ENSTRUG00000010224	rab42a	73	41.875	ENSTRUG00000014595	-	75	41.875
ENSTRUG00000010224	rab42a	78	33.526	ENSTRUG00000010393	-	67	33.526
ENSTRUG00000010224	rab42a	75	31.138	ENSTRUG00000023011	rerg	82	31.138
ENSTRUG00000010224	rab42a	67	43.919	ENSTRUG00000009903	zgc:101559	63	43.919
ENSTRUG00000010224	rab42a	96	37.850	ENSTRUG00000017824	rab15	96	37.850
ENSTRUG00000010224	rab42a	69	35.526	ENSTRUG00000005805	mras	79	34.940
ENSTRUG00000010224	rab42a	79	42.442	ENSTRUG00000023164	rab1ab	84	42.442
ENSTRUG00000010224	rab42a	84	42.623	ENSTRUG00000021614	-	83	42.623
ENSTRUG00000010224	rab42a	75	37.195	ENSTRUG00000015590	rab5c	74	37.195
ENSTRUG00000010224	rab42a	73	44.375	ENSTRUG00000022559	rab30	78	44.375
ENSTRUG00000010224	rab42a	78	32.370	ENSTRUG00000014481	rab34b	70	32.370

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000010224	rab42a	100	96.789	ENSAPOG00000009188	rab42a	100	96.789	Acanthochromis_polyacanthus
ENSTRUG00000010224	rab42a	100	96.330	ENSACIG00000003102	rab42a	100	96.330	Amphilophus_citrinellus
ENSTRUG00000010224	rab42a	100	95.872	ENSAOCG00000012921	rab42a	83	95.872	Amphiprion_ocellaris
ENSTRUG00000010224	rab42a	100	95.872	ENSAPEG00000007713	rab42a	83	95.872	Amphiprion_percula
ENSTRUG00000010224	rab42a	100	94.495	ENSATEG00000009052	rab42a	100	94.495	Anabas_testudineus
ENSTRUG00000010224	rab42a	100	95.872	ENSACLG00000007514	rab42a	100	95.872	Astatotilapia_calliptera
ENSTRUG00000010224	rab42a	100	91.743	ENSAMXG00000032729	rab42a	100	91.743	Astyanax_mexicanus
ENSTRUG00000010224	rab42a	100	93.119	ENSCSEG00000010582	rab42a	100	93.119	Cynoglossus_semilaevis
ENSTRUG00000010224	rab42a	100	47.032	ENSDARG00000102580	CU571310.1	99	47.032	Danio_rerio
ENSTRUG00000010224	rab42a	100	91.284	ENSDARG00000034215	rab42a	100	91.284	Danio_rerio
ENSTRUG00000010224	rab42a	100	89.450	ENSELUG00000010345	rab42a	100	89.450	Esox_lucius
ENSTRUG00000010224	rab42a	100	94.954	ENSFHEG00000013106	rab42a	100	94.954	Fundulus_heteroclitus
ENSTRUG00000010224	rab42a	100	94.954	ENSGAFG00000002141	rab42a	100	94.954	Gambusia_affinis
ENSTRUG00000010224	rab42a	100	95.872	ENSHBUG00000015126	rab42a	82	95.872	Haplochromis_burtoni
ENSTRUG00000010224	rab42a	100	88.532	ENSIPUG00000011376	rab42a	100	88.532	Ictalurus_punctatus
ENSTRUG00000010224	rab42a	100	94.495	ENSKMAG00000007267	rab42a	100	94.495	Kryptolebias_marmoratus
ENSTRUG00000010224	rab42a	100	96.789	ENSLBEG00000001193	rab42a	100	96.789	Labrus_bergylta
ENSTRUG00000010224	rab42a	100	65.138	ENSLACG00000012755	-	100	65.138	Latimeria_chalumnae
ENSTRUG00000010224	rab42a	100	51.598	ENSLOCG00000015825	-	99	51.598	Lepisosteus_oculatus
ENSTRUG00000010224	rab42a	100	83.945	ENSLOCG00000003453	rab42a	100	83.945	Lepisosteus_oculatus
ENSTRUG00000010224	rab42a	100	97.706	ENSMAMG00000002296	rab42a	100	97.706	Mastacembelus_armatus
ENSTRUG00000010224	rab42a	100	95.872	ENSMZEG00005012460	rab42a	82	95.872	Maylandia_zebra
ENSTRUG00000010224	rab42a	100	93.119	ENSMMOG00000014358	rab42a	100	93.119	Mola_mola
ENSTRUG00000010224	rab42a	100	96.330	ENSNBRG00000021487	rab42a	82	96.330	Neolamprologus_brichardi
ENSTRUG00000010224	rab42a	100	95.413	ENSORLG00000022335	rab42a	100	95.413	Oryzias_latipes
ENSTRUG00000010224	rab42a	100	95.413	ENSORLG00020013895	rab42a	100	95.413	Oryzias_latipes_hni
ENSTRUG00000010224	rab42a	100	95.413	ENSORLG00015004273	rab42a	100	95.413	Oryzias_latipes_hsok
ENSTRUG00000010224	rab42a	100	95.413	ENSOMEG00000020418	rab42a	100	95.413	Oryzias_melastigma
ENSTRUG00000010224	rab42a	99	46.544	ENSPKIG00000015234	-	99	46.544	Paramormyrops_kingsleyae
ENSTRUG00000010224	rab42a	100	78.082	ENSPKIG00000021215	-	100	78.082	Paramormyrops_kingsleyae
ENSTRUG00000010224	rab42a	90	97.462	ENSPMGG00000024112	rab42a	90	97.462	Periophthalmus_magnuspinnatus
ENSTRUG00000010224	rab42a	100	94.037	ENSPFOG00000004838	rab42a	82	94.037	Poecilia_formosa
ENSTRUG00000010224	rab42a	100	94.495	ENSPLAG00000005628	rab42a	100	94.495	Poecilia_latipinna
ENSTRUG00000010224	rab42a	100	94.037	ENSPMEG00000019497	rab42a	100	94.037	Poecilia_mexicana
ENSTRUG00000010224	rab42a	100	94.954	ENSPREG00000013962	rab42a	100	94.954	Poecilia_reticulata
ENSTRUG00000010224	rab42a	100	95.872	ENSPNYG00000010325	rab42a	82	95.872	Pundamilia_nyererei
ENSTRUG00000010224	rab42a	100	91.284	ENSPNAG00000016567	rab42a	100	91.284	Pygocentrus_nattereri
ENSTRUG00000010224	rab42a	100	85.321	ENSSFOG00015020732	rab42a	100	85.321	Scleropages_formosus
ENSTRUG00000010224	rab42a	100	46.119	ENSSFOG00015016000	-	97	46.119	Scleropages_formosus
ENSTRUG00000010224	rab42a	100	94.954	ENSSMAG00000020311	rab42a	100	94.954	Scophthalmus_maximus
ENSTRUG00000010224	rab42a	100	97.248	ENSSDUG00000011851	rab42a	100	97.248	Seriola_dumerili
ENSTRUG00000010224	rab42a	100	97.248	ENSSLDG00000020354	rab42a	100	97.248	Seriola_lalandi_dorsalis
ENSTRUG00000010224	rab42a	100	97.706	ENSSPAG00000016167	rab42a	100	97.706	Stegastes_partitus
ENSTRUG00000010224	rab42a	100	95.413	ENSXCOG00000003428	rab42a	100	95.413	Xiphophorus_couchianus
ENSTRUG00000010224	rab42a	100	95.413	ENSXMAG00000028376	rab42a	100	95.413	Xiphophorus_maculatus