EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000010236 (Gene tree)
Gene ID: 101067740
Gene Symbol: exd3
Alias: si:ch211-183l21.3
Full Name: exonuclease 3'-5' domain containing 3
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 25486 bases
Position: chrHE591855.1:108565-134050
Accession: 101067740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000025787	DNA_pol_A_exo1	PF01612.20	1.5e-21	1	1
ENSTRUP00000025785	DNA_pol_A_exo1	PF01612.20	1.6e-21	1	1
ENSTRUP00000053055	DNA_pol_A_exo1	PF01612.20	1.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000054913	-	3757	XM_011617819	ENSTRUP00000053055	947 (aa)	XP_011616121	-
ENSTRUT00000025891	-	3594	XM_011617820	ENSTRUP00000025787	910 (aa)	XP_011616122	H2TM81
ENSTRUT00000025889	-	3675	-	ENSTRUP00000025785	937 (aa)	-	H2TM79

Gene Model

Click here to download ENSTRUG00000010236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000010236's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000010236	exd3	95	37.320	ENSG00000187609	EXD3	97	37.583	Homo_sapiens
ENSTRUG00000010236	exd3	91	69.180	ENSAPOG00000015520	exd3	100	69.180	Acanthochromis_polyacanthus
ENSTRUG00000010236	exd3	94	62.640	ENSACIG00000005561	exd3	93	66.934	Amphilophus_citrinellus
ENSTRUG00000010236	exd3	97	68.649	ENSAOCG00000007721	exd3	99	68.649	Amphiprion_ocellaris
ENSTRUG00000010236	exd3	96	68.879	ENSAPEG00000007019	exd3	100	68.879	Amphiprion_percula
ENSTRUG00000010236	exd3	94	69.299	ENSATEG00000019941	exd3	99	69.410	Anabas_testudineus
ENSTRUG00000010236	exd3	78	43.017	ENSAPLG00000015358	EXD3	99	42.359	Anas_platyrhynchos
ENSTRUG00000010236	exd3	94	35.667	ENSANAG00000019674	EXD3	98	35.390	Aotus_nancymaae
ENSTRUG00000010236	exd3	96	67.470	ENSACLG00000021922	exd3	100	67.470	Astatotilapia_calliptera
ENSTRUG00000010236	exd3	95	50.330	ENSAMXG00000019494	exd3	99	50.438	Astyanax_mexicanus
ENSTRUG00000010236	exd3	93	38.047	ENSBTAG00000023788	EXD3	99	38.047	Bos_taurus
ENSTRUG00000010236	exd3	96	37.268	ENSCJAG00000013170	EXD3	98	37.268	Callithrix_jacchus
ENSTRUG00000010236	exd3	94	39.377	ENSCAFG00000019444	EXD3	98	39.377	Canis_familiaris
ENSTRUG00000010236	exd3	91	39.216	ENSCAFG00020003171	EXD3	91	39.216	Canis_lupus_dingo
ENSTRUG00000010236	exd3	94	37.458	ENSCCAG00000027996	EXD3	98	37.118	Cebus_capucinus
ENSTRUG00000010236	exd3	94	38.137	ENSCSAG00000016661	EXD3	98	38.069	Chlorocebus_sabaeus
ENSTRUG00000010236	exd3	78	43.273	ENSCPBG00000011686	EXD3	90	42.071	Chrysemys_picta_bellii
ENSTRUG00000010236	exd3	80	31.258	ENSCING00000002195	-	84	31.258	Ciona_intestinalis
ENSTRUG00000010236	exd3	96	38.428	ENSCANG00000040692	EXD3	98	38.428	Colobus_angolensis_palliatus
ENSTRUG00000010236	exd3	95	64.509	ENSCSEG00000000750	exd3	99	65.732	Cynoglossus_semilaevis
ENSTRUG00000010236	exd3	96	64.270	ENSCVAG00000011560	exd3	99	64.270	Cyprinodon_variegatus
ENSTRUG00000010236	exd3	93	52.429	ENSDARG00000063140	exd3	99	52.822	Danio_rerio
ENSTRUG00000010236	exd3	91	39.241	ENSEASG00005016023	EXD3	97	39.249	Equus_asinus_asinus
ENSTRUG00000010236	exd3	93	38.565	ENSECAG00000017546	EXD3	97	38.385	Equus_caballus
ENSTRUG00000010236	exd3	67	40.811	ENSEEUG00000000405	-	88	38.683	Erinaceus_europaeus
ENSTRUG00000010236	exd3	94	58.072	ENSELUG00000007181	exd3	98	58.296	Esox_lucius
ENSTRUG00000010236	exd3	94	38.154	ENSFCAG00000003579	EXD3	97	38.154	Felis_catus
ENSTRUG00000010236	exd3	88	42.149	ENSFALG00000005132	EXD3	98	42.267	Ficedula_albicollis
ENSTRUG00000010236	exd3	95	57.364	ENSFHEG00000011352	exd3	99	57.364	Fundulus_heteroclitus
ENSTRUG00000010236	exd3	54	40.441	ENSGMOG00000013542	-	99	40.441	Gadus_morhua
ENSTRUG00000010236	exd3	94	40.154	ENSGALG00000052646	EXD3	98	40.154	Gallus_gallus
ENSTRUG00000010236	exd3	95	62.835	ENSGAFG00000007328	exd3	99	62.835	Gambusia_affinis
ENSTRUG00000010236	exd3	82	65.060	ENSGACG00000017442	exd3	100	65.060	Gasterosteus_aculeatus
ENSTRUG00000010236	exd3	80	38.608	ENSGAGG00000011888	EXD3	92	38.608	Gopherus_agassizii
ENSTRUG00000010236	exd3	67	62.698	ENSGGOG00000024724	EXD3	79	62.698	Gorilla_gorilla
ENSTRUG00000010236	exd3	96	67.360	ENSHBUG00000001405	exd3	100	67.360	Haplochromis_burtoni
ENSTRUG00000010236	exd3	95	62.584	ENSHCOG00000020087	exd3	99	62.584	Hippocampus_comes
ENSTRUG00000010236	exd3	95	50.000	ENSIPUG00000020343	exd3	99	49.945	Ictalurus_punctatus
ENSTRUG00000010236	exd3	95	64.901	ENSKMAG00000011881	exd3	99	64.901	Kryptolebias_marmoratus
ENSTRUG00000010236	exd3	91	66.508	ENSLBEG00000004079	exd3	95	65.893	Labrus_bergylta
ENSTRUG00000010236	exd3	94	49.443	ENSLOCG00000002330	exd3	99	49.889	Lepisosteus_oculatus
ENSTRUG00000010236	exd3	81	38.089	ENSLAFG00000001122	EXD3	96	38.089	Loxodonta_africana
ENSTRUG00000010236	exd3	96	38.142	ENSMFAG00000037569	EXD3	98	38.286	Macaca_fascicularis
ENSTRUG00000010236	exd3	95	43.458	ENSMNEG00000033487	EXD3	97	38.074	Macaca_nemestrina
ENSTRUG00000010236	exd3	96	36.612	ENSMLEG00000040548	EXD3	97	36.871	Mandrillus_leucophaeus
ENSTRUG00000010236	exd3	85	69.794	ENSMAMG00000008407	exd3	96	69.923	Mastacembelus_armatus
ENSTRUG00000010236	exd3	96	67.470	ENSMZEG00005017270	exd3	100	67.470	Maylandia_zebra
ENSTRUG00000010236	exd3	78	41.899	ENSMGAG00000001267	EXD3	99	41.398	Meleagris_gallopavo
ENSTRUG00000010236	exd3	92	67.698	ENSMMOG00000021267	exd3	100	67.698	Mola_mola
ENSTRUG00000010236	exd3	57	42.599	ENSMODG00000028091	-	97	42.599	Monodelphis_domestica
ENSTRUG00000010236	exd3	96	65.319	ENSMALG00000018523	exd3	96	70.475	Monopterus_albus
ENSTRUG00000010236	exd3	92	37.585	ENSMPUG00000015130	EXD3	96	37.361	Mustela_putorius_furo
ENSTRUG00000010236	exd3	96	63.706	ENSNBRG00000019734	exd3	100	63.706	Neolamprologus_brichardi
ENSTRUG00000010236	exd3	81	38.160	ENSNLEG00000009095	-	94	38.160	Nomascus_leucogenys
ENSTRUG00000010236	exd3	81	68.691	ENSONIG00000003880	exd3	97	68.691	Oreochromis_niloticus
ENSTRUG00000010236	exd3	81	39.683	ENSOANG00000012485	-	98	39.683	Ornithorhynchus_anatinus
ENSTRUG00000010236	exd3	97	62.704	ENSORLG00000010377	exd3	99	65.452	Oryzias_latipes
ENSTRUG00000010236	exd3	97	62.814	ENSORLG00020012287	exd3	99	63.141	Oryzias_latipes_hni
ENSTRUG00000010236	exd3	95	63.385	ENSORLG00015001156	exd3	99	65.099	Oryzias_latipes_hsok
ENSTRUG00000010236	exd3	95	63.728	ENSOMEG00000023060	exd3	99	63.728	Oryzias_melastigma
ENSTRUG00000010236	exd3	95	37.389	ENSPPAG00000042435	EXD3	98	37.309	Pan_paniscus
ENSTRUG00000010236	exd3	94	38.631	ENSPPRG00000004634	EXD3	97	38.631	Panthera_pardus
ENSTRUG00000010236	exd3	96	36.831	ENSPANG00000026338	EXD3	97	37.090	Papio_anubis
ENSTRUG00000010236	exd3	94	51.620	ENSPKIG00000021103	exd3	98	51.620	Paramormyrops_kingsleyae
ENSTRUG00000010236	exd3	88	40.909	ENSPSIG00000007745	EXD3	97	40.371	Pelodiscus_sinensis
ENSTRUG00000010236	exd3	94	60.246	ENSPMGG00000023999	exd3	99	60.246	Periophthalmus_magnuspinnatus
ENSTRUG00000010236	exd3	65	34.106	ENSPMAG00000006135	-	99	34.215	Petromyzon_marinus
ENSTRUG00000010236	exd3	95	41.585	ENSPCIG00000006180	-	99	41.585	Phascolarctos_cinereus
ENSTRUG00000010236	exd3	95	62.027	ENSPFOG00000019685	exd3	99	65.309	Poecilia_formosa
ENSTRUG00000010236	exd3	88	65.802	ENSPLAG00000022290	exd3	99	65.802	Poecilia_latipinna
ENSTRUG00000010236	exd3	95	63.636	ENSPMEG00000008007	exd3	99	65.309	Poecilia_mexicana
ENSTRUG00000010236	exd3	94	64.057	ENSPREG00000008142	exd3	99	66.131	Poecilia_reticulata
ENSTRUG00000010236	exd3	96	67.360	ENSPNYG00000012849	exd3	100	67.360	Pundamilia_nyererei
ENSTRUG00000010236	exd3	95	52.444	ENSPNAG00000016753	exd3	99	52.444	Pygocentrus_nattereri
ENSTRUG00000010236	exd3	96	38.033	ENSRBIG00000031855	EXD3	97	38.293	Rhinopithecus_bieti
ENSTRUG00000010236	exd3	96	37.705	ENSRROG00000040120	EXD3	97	38.184	Rhinopithecus_roxellana
ENSTRUG00000010236	exd3	95	37.307	ENSSBOG00000022389	EXD3	93	37.349	Saimiri_boliviensis_boliviensis
ENSTRUG00000010236	exd3	80	40.463	ENSSHAG00000001276	-	98	40.637	Sarcophilus_harrisii
ENSTRUG00000010236	exd3	85	61.111	ENSSFOG00015023063	exd3	92	61.111	Scleropages_formosus
ENSTRUG00000010236	exd3	96	65.730	ENSSMAG00000019809	exd3	100	65.730	Scophthalmus_maximus
ENSTRUG00000010236	exd3	85	73.171	ENSSDUG00000006265	exd3	96	73.171	Seriola_dumerili
ENSTRUG00000010236	exd3	87	68.966	ENSSLDG00000004671	exd3	99	68.966	Seriola_lalandi_dorsalis
ENSTRUG00000010236	exd3	95	67.473	ENSSPAG00000017972	exd3	99	67.473	Stegastes_partitus
ENSTRUG00000010236	exd3	84	38.509	ENSSSCG00000005855	EXD3	98	37.515	Sus_scrofa
ENSTRUG00000010236	exd3	78	43.611	ENSTGUG00000002494	EXD3	99	43.182	Taeniopygia_guttata
ENSTRUG00000010236	exd3	83	78.346	ENSTNIG00000013212	exd3	96	78.346	Tetraodon_nigroviridis
ENSTRUG00000010236	exd3	51	43.506	ENSTTRG00000003815	-	57	43.506	Tursiops_truncatus
ENSTRUG00000010236	exd3	88	39.001	ENSUAMG00000021470	EXD3	98	39.001	Ursus_americanus
ENSTRUG00000010236	exd3	91	39.404	ENSVVUG00000029403	EXD3	92	39.404	Vulpes_vulpes
ENSTRUG00000010236	exd3	88	66.255	ENSXMAG00000001467	exd3	99	66.255	Xiphophorus_maculatus