EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000010282 (Gene tree)
Gene ID: -
Gene Symbol: chd1
Alias: fc26h11|fk85d05|si:dkey-106m21.4|wu:fc26h11|wu:fk85d05|zgc:173506
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 13759 bases
Position: chr6:687527-701285
Accession: 101063723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000025882	ResIII	PF04851.15	3.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000025987	-	4983	XM_011604415	ENSTRUP00000025882	1660 (aa)	XP_011602717	H2TMH6

Gene Model

Click here to download ENSTRUG00000010282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000010282's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000010282	chd1	76	60.284	ENSTRUG00000008842	chd2	69	65.060

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000010282	chd1	96	73.418	ENSG00000153922	CHD1	90	75.418	Homo_sapiens
ENSTRUG00000010282	chd1	68	88.966	ENSAPOG00000005764	chd1	98	88.448	Acanthochromis_polyacanthus
ENSTRUG00000010282	chd1	89	86.189	ENSAOCG00000023105	chd1	94	85.857	Amphiprion_ocellaris
ENSTRUG00000010282	chd1	89	87.459	ENSAPEG00000013544	chd1	94	87.127	Amphiprion_percula
ENSTRUG00000010282	chd1	71	85.619	ENSAMXG00000010843	chd1	92	85.309	Astyanax_mexicanus
ENSTRUG00000010282	chd1	96	73.144	ENSCATG00000032035	CHD1	91	75.354	Cercocebus_atys
ENSTRUG00000010282	chd1	90	75.804	ENSCSAG00000015339	CHD1	90	75.290	Chlorocebus_sabaeus
ENSTRUG00000010282	chd1	90	73.921	ENSCANG00000036916	CHD1	97	70.585	Colobus_angolensis_palliatus
ENSTRUG00000010282	chd1	100	73.206	ENSCGRG00001023943	Chd1	90	75.226	Cricetulus_griseus_chok1gshd
ENSTRUG00000010282	chd1	100	73.206	ENSCGRG00000008652	Chd1	90	75.226	Cricetulus_griseus_crigri
ENSTRUG00000010282	chd1	89	83.355	ENSCSEG00000009553	chd1	95	83.223	Cynoglossus_semilaevis
ENSTRUG00000010282	chd1	78	76.716	ENSEASG00005016110	CHD1	89	78.990	Equus_asinus_asinus
ENSTRUG00000010282	chd1	89	81.173	ENSELUG00000017677	chd1	93	81.042	Esox_lucius
ENSTRUG00000010282	chd1	72	86.825	ENSFHEG00000021164	chd1	89	86.743	Fundulus_heteroclitus
ENSTRUG00000010282	chd1	95	82.788	ENSGMOG00000001537	chd1	94	81.716	Gadus_morhua
ENSTRUG00000010282	chd1	92	74.302	ENSGALG00000031327	-	94	74.758	Gallus_gallus
ENSTRUG00000010282	chd1	86	78.293	ENSGAFG00000019880	chd1	92	79.911	Gambusia_affinis
ENSTRUG00000010282	chd1	96	70.645	ENSGGOG00000011463	CHD1	90	72.329	Gorilla_gorilla
ENSTRUG00000010282	chd1	89	86.085	ENSHCOG00000014222	chd1	93	85.952	Hippocampus_comes
ENSTRUG00000010282	chd1	89	81.645	ENSIPUG00000001369	chd1	94	81.184	Ictalurus_punctatus
ENSTRUG00000010282	chd1	59	76.186	ENSLAFG00000023183	CHD1	84	79.425	Loxodonta_africana
ENSTRUG00000010282	chd1	96	73.084	ENSMFAG00000031226	CHD1	91	75.290	Macaca_fascicularis
ENSTRUG00000010282	chd1	79	75.867	ENSMMUG00000014090	CHD1	87	78.892	Macaca_mulatta
ENSTRUG00000010282	chd1	96	73.084	ENSMNEG00000045073	CHD1	91	75.290	Macaca_nemestrina
ENSTRUG00000010282	chd1	96	69.589	ENSMLEG00000041096	CHD1	90	72.276	Mandrillus_leucophaeus
ENSTRUG00000010282	chd1	72	89.116	ENSMZEG00005010957	chd1	92	88.380	Maylandia_zebra
ENSTRUG00000010282	chd1	100	71.846	ENSMOCG00000019121	Chd1	100	71.611	Microtus_ochrogaster
ENSTRUG00000010282	chd1	79	86.854	ENSMALG00000013317	chd1	95	86.115	Monopterus_albus
ENSTRUG00000010282	chd1	100	72.817	MGP_CAROLIEiJ_G0021099	Chd1	99	76.111	Mus_caroli
ENSTRUG00000010282	chd1	100	73.195	ENSMUSG00000023852	Chd1	100	71.644	Mus_musculus
ENSTRUG00000010282	chd1	100	73.593	MGP_PahariEiJ_G0023414	Chd1	99	76.830	Mus_pahari
ENSTRUG00000010282	chd1	89	85.439	ENSNBRG00000006860	chd1	93	84.973	Neolamprologus_brichardi
ENSTRUG00000010282	chd1	96	71.993	ENSNLEG00000014493	CHD1	90	73.755	Nomascus_leucogenys
ENSTRUG00000010282	chd1	96	73.952	ENSOANG00000004891	CHD1	100	77.150	Ornithorhynchus_anatinus
ENSTRUG00000010282	chd1	60	84.921	ENSORLG00015016725	chd1	95	86.097	Oryzias_latipes_hsok
ENSTRUG00000010282	chd1	96	72.613	ENSPPAG00000043367	CHD1	91	74.311	Pan_paniscus
ENSTRUG00000010282	chd1	96	73.522	ENSPTRG00000017103	CHD1	90	75.402	Pan_troglodytes
ENSTRUG00000010282	chd1	96	73.084	ENSPANG00000006387	CHD1	91	75.290	Papio_anubis
ENSTRUG00000010282	chd1	92	83.673	ENSPKIG00000024719	chd1	95	82.609	Paramormyrops_kingsleyae
ENSTRUG00000010282	chd1	74	87.903	ENSPMGG00000005785	chd1	93	87.016	Periophthalmus_magnuspinnatus
ENSTRUG00000010282	chd1	100	73.117	ENSPEMG00000015939	Chd1	90	75.226	Peromyscus_maniculatus_bairdii
ENSTRUG00000010282	chd1	50	83.373	ENSPLAG00000006473	-	85	83.413	Poecilia_latipinna
ENSTRUG00000010282	chd1	96	81.212	ENSPREG00000004209	chd1	97	81.104	Poecilia_reticulata
ENSTRUG00000010282	chd1	83	76.073	ENSRNOG00000014434	Chd1	99	75.653	Rattus_norvegicus
ENSTRUG00000010282	chd1	96	71.784	ENSRBIG00000044325	CHD1	90	73.793	Rhinopithecus_bieti
ENSTRUG00000010282	chd1	96	73.096	ENSRROG00000001726	CHD1	91	75.306	Rhinopithecus_roxellana
ENSTRUG00000010282	chd1	72	83.237	ENSSFOG00015007161	chd1	90	83.635	Scleropages_formosus
ENSTRUG00000010282	chd1	79	88.550	ENSSDUG00000018314	chd1	94	88.104	Seriola_dumerili
ENSTRUG00000010282	chd1	52	91.932	ENSSLDG00000017244	chd1	88	92.159	Seriola_lalandi_dorsalis
ENSTRUG00000010282	chd1	79	87.870	ENSSPAG00000007024	chd1	95	86.603	Stegastes_partitus
ENSTRUG00000010282	chd1	83	76.295	ENSSSCG00000014177	CHD1	88	79.403	Sus_scrofa
ENSTRUG00000010282	chd1	72	92.492	ENSTNIG00000007101	chd1	100	91.400	Tetraodon_nigroviridis
ENSTRUG00000010282	chd1	96	78.607	ENSXCOG00000017184	chd1	98	77.281	Xiphophorus_couchianus
ENSTRUG00000010282	chd1	78	85.019	ENSXMAG00000014538	chd1	94	86.005	Xiphophorus_maculatus