EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000010493 (Gene tree)
Gene ID: 101065711
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 6341 bases
Position: chrHE591855.1:141553-147893
Accession: 101065711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000026468	RTC	PF01137.21	8.5e-58	1	1
ENSTRUP00000026468	RTC_insert	PF05189.13	4.7e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000026575	-	1451	XM_003976786	ENSTRUP00000026468	372 (aa)	XP_003976835	H2TP62

Gene Model

Click here to download ENSTRUG00000010493's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000010493's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000010493	rcl1	99	78.649	ENSG00000120158	RCL1	100	81.019	Homo_sapiens
ENSTRUG00000010493	rcl1	100	88.441	ENSAPOG00000015666	rcl1	100	88.441	Acanthochromis_polyacanthus
ENSTRUG00000010493	rcl1	99	79.730	ENSAMEG00000002631	RCL1	99	79.730	Ailuropoda_melanoleuca
ENSTRUG00000010493	rcl1	100	86.559	ENSACIG00000021195	rcl1	100	86.559	Amphilophus_citrinellus
ENSTRUG00000010493	rcl1	100	87.634	ENSAOCG00000002223	rcl1	100	87.634	Amphiprion_ocellaris
ENSTRUG00000010493	rcl1	100	88.172	ENSAPEG00000006905	rcl1	100	88.172	Amphiprion_percula
ENSTRUG00000010493	rcl1	100	86.828	ENSATEG00000020026	rcl1	100	86.828	Anabas_testudineus
ENSTRUG00000010493	rcl1	88	74.772	ENSAPLG00000006031	RCL1	100	74.772	Anas_platyrhynchos
ENSTRUG00000010493	rcl1	99	74.054	ENSACAG00000003640	RCL1	99	74.054	Anolis_carolinensis
ENSTRUG00000010493	rcl1	99	78.378	ENSANAG00000037372	RCL1	99	78.378	Aotus_nancymaae
ENSTRUG00000010493	rcl1	100	87.097	ENSACLG00000021724	rcl1	100	87.097	Astatotilapia_calliptera
ENSTRUG00000010493	rcl1	99	79.891	ENSAMXG00000033394	rcl1	99	79.891	Astyanax_mexicanus
ENSTRUG00000010493	rcl1	99	46.032	WBGene00022852	ZK1127.5	99	46.032	Caenorhabditis_elegans
ENSTRUG00000010493	rcl1	99	78.378	ENSCJAG00000011202	RCL1	99	78.378	Callithrix_jacchus
ENSTRUG00000010493	rcl1	99	79.730	ENSCAFG00000002091	RCL1	99	79.730	Canis_familiaris
ENSTRUG00000010493	rcl1	99	79.730	ENSCAFG00020000638	RCL1	77	79.730	Canis_lupus_dingo
ENSTRUG00000010493	rcl1	99	78.919	ENSCHIG00000012407	RCL1	99	78.919	Capra_hircus
ENSTRUG00000010493	rcl1	88	80.183	ENSTSYG00000009592	RCL1	97	81.868	Carlito_syrichta
ENSTRUG00000010493	rcl1	66	67.901	ENSCAPG00000013575	RCL1	100	67.901	Cavia_aperea
ENSTRUG00000010493	rcl1	99	78.378	ENSCPOG00000015354	RCL1	99	78.378	Cavia_porcellus
ENSTRUG00000010493	rcl1	99	78.378	ENSCCAG00000033505	RCL1	99	78.378	Cebus_capucinus
ENSTRUG00000010493	rcl1	99	78.108	ENSCATG00000034721	RCL1	97	80.769	Cercocebus_atys
ENSTRUG00000010493	rcl1	99	79.189	ENSCLAG00000007445	RCL1	99	79.189	Chinchilla_lanigera
ENSTRUG00000010493	rcl1	99	78.378	ENSCSAG00000008811	RCL1	99	78.378	Chlorocebus_sabaeus
ENSTRUG00000010493	rcl1	86	70.219	ENSCHOG00000007216	RCL1	99	70.219	Choloepus_hoffmanni
ENSTRUG00000010493	rcl1	99	73.984	ENSCPBG00000025481	RCL1	94	74.545	Chrysemys_picta_bellii
ENSTRUG00000010493	rcl1	99	58.649	ENSCING00000019565	-	98	58.649	Ciona_intestinalis
ENSTRUG00000010493	rcl1	99	78.378	ENSCANG00000027099	RCL1	99	78.378	Colobus_angolensis_palliatus
ENSTRUG00000010493	rcl1	99	78.649	ENSCGRG00001013748	Rcl1	99	78.649	Cricetulus_griseus_chok1gshd
ENSTRUG00000010493	rcl1	88	79.635	ENSCGRG00000005843	Rcl1	99	79.635	Cricetulus_griseus_crigri
ENSTRUG00000010493	rcl1	100	86.559	ENSCSEG00000000712	rcl1	98	86.559	Cynoglossus_semilaevis
ENSTRUG00000010493	rcl1	100	87.634	ENSCVAG00000011536	rcl1	100	87.634	Cyprinodon_variegatus
ENSTRUG00000010493	rcl1	98	79.178	ENSDARG00000038312	rcl1	99	79.178	Danio_rerio
ENSTRUG00000010493	rcl1	72	79.323	ENSDNOG00000019911	RCL1	100	81.481	Dasypus_novemcinctus
ENSTRUG00000010493	rcl1	99	79.189	ENSDORG00000015645	Rcl1	99	79.189	Dipodomys_ordii
ENSTRUG00000010493	rcl1	98	52.561	FBgn0020909	Rtc1	97	53.369	Drosophila_melanogaster
ENSTRUG00000010493	rcl1	88	54.268	ENSETEG00000014087	-	82	91.304	Echinops_telfairi
ENSTRUG00000010493	rcl1	100	54.960	ENSEBUG00000016621	-	99	55.228	Eptatretus_burgeri
ENSTRUG00000010493	rcl1	99	78.378	ENSEASG00005010653	RCL1	99	78.378	Equus_asinus_asinus
ENSTRUG00000010493	rcl1	99	78.378	ENSECAG00000015973	RCL1	99	78.378	Equus_caballus
ENSTRUG00000010493	rcl1	99	67.568	ENSEEUG00000009801	RCL1	99	67.568	Erinaceus_europaeus
ENSTRUG00000010493	rcl1	100	76.613	ENSELUG00000007353	rcl1	100	76.613	Esox_lucius
ENSTRUG00000010493	rcl1	99	78.919	ENSFCAG00000014557	RCL1	99	78.919	Felis_catus
ENSTRUG00000010493	rcl1	100	69.355	ENSFALG00000010553	RCL1	98	69.355	Ficedula_albicollis
ENSTRUG00000010493	rcl1	88	78.659	ENSFDAG00000004209	RCL1	100	78.659	Fukomys_damarensis
ENSTRUG00000010493	rcl1	100	88.978	ENSFHEG00000011228	rcl1	100	88.978	Fundulus_heteroclitus
ENSTRUG00000010493	rcl1	100	81.720	ENSGMOG00000004677	rcl1	100	81.720	Gadus_morhua
ENSTRUG00000010493	rcl1	99	73.842	ENSGALG00000015024	RCL1	98	73.842	Gallus_gallus
ENSTRUG00000010493	rcl1	100	88.441	ENSGAFG00000007257	rcl1	100	88.441	Gambusia_affinis
ENSTRUG00000010493	rcl1	100	88.978	ENSGACG00000017474	rcl1	100	88.978	Gasterosteus_aculeatus
ENSTRUG00000010493	rcl1	99	73.984	ENSGAGG00000003689	RCL1	99	73.984	Gopherus_agassizii
ENSTRUG00000010493	rcl1	99	78.108	ENSGGOG00000015041	RCL1	97	80.220	Gorilla_gorilla
ENSTRUG00000010493	rcl1	100	87.097	ENSHBUG00000001393	rcl1	100	87.097	Haplochromis_burtoni
ENSTRUG00000010493	rcl1	99	65.312	ENSHGLG00000005368	-	99	64.228	Heterocephalus_glaber_female
ENSTRUG00000010493	rcl1	99	78.378	ENSHGLG00000016452	RCL1	99	78.378	Heterocephalus_glaber_female
ENSTRUG00000010493	rcl1	99	73.243	ENSHGLG00100008718	-	99	73.243	Heterocephalus_glaber_male
ENSTRUG00000010493	rcl1	99	66.125	ENSHGLG00100018010	-	99	66.125	Heterocephalus_glaber_male
ENSTRUG00000010493	rcl1	100	88.172	ENSHCOG00000020170	rcl1	100	88.172	Hippocampus_comes
ENSTRUG00000010493	rcl1	99	81.471	ENSIPUG00000018054	RCL1	99	81.471	Ictalurus_punctatus
ENSTRUG00000010493	rcl1	99	78.108	ENSSTOG00000000023	RCL1	99	78.108	Ictidomys_tridecemlineatus
ENSTRUG00000010493	rcl1	99	78.919	ENSJJAG00000022803	-	99	78.919	Jaculus_jaculus
ENSTRUG00000010493	rcl1	54	60.891	ENSJJAG00000000764	-	98	60.891	Jaculus_jaculus
ENSTRUG00000010493	rcl1	99	69.459	ENSJJAG00000015632	-	99	69.459	Jaculus_jaculus
ENSTRUG00000010493	rcl1	100	88.441	ENSKMAG00000011946	rcl1	100	88.441	Kryptolebias_marmoratus
ENSTRUG00000010493	rcl1	100	83.065	ENSLBEG00000003957	rcl1	100	83.065	Labrus_bergylta
ENSTRUG00000010493	rcl1	93	73.410	ENSLACG00000004594	RCL1	100	77.640	Latimeria_chalumnae
ENSTRUG00000010493	rcl1	100	77.957	ENSLOCG00000010148	rcl1	98	77.957	Lepisosteus_oculatus
ENSTRUG00000010493	rcl1	99	77.568	ENSLAFG00000017495	RCL1	99	77.568	Loxodonta_africana
ENSTRUG00000010493	rcl1	99	78.378	ENSMFAG00000037906	RCL1	99	78.378	Macaca_fascicularis
ENSTRUG00000010493	rcl1	99	78.378	ENSMNEG00000012288	RCL1	97	80.769	Macaca_nemestrina
ENSTRUG00000010493	rcl1	99	78.378	ENSMLEG00000043088	RCL1	99	78.378	Mandrillus_leucophaeus
ENSTRUG00000010493	rcl1	100	87.097	ENSMAMG00000008311	rcl1	100	87.097	Mastacembelus_armatus
ENSTRUG00000010493	rcl1	100	87.097	ENSMZEG00005017292	rcl1	100	87.097	Maylandia_zebra
ENSTRUG00000010493	rcl1	58	73.182	ENSMGAG00000002245	RCL1	100	73.182	Meleagris_gallopavo
ENSTRUG00000010493	rcl1	58	81.019	ENSMAUG00000008922	Rcl1	100	81.019	Mesocricetus_auratus
ENSTRUG00000010493	rcl1	99	79.133	ENSMICG00000015562	RCL1	99	79.133	Microcebus_murinus
ENSTRUG00000010493	rcl1	99	78.649	ENSMOCG00000012145	Rcl1	99	78.649	Microtus_ochrogaster
ENSTRUG00000010493	rcl1	100	86.327	ENSMMOG00000021264	rcl1	100	86.327	Mola_mola
ENSTRUG00000010493	rcl1	95	77.557	ENSMODG00000015377	RCL1	93	77.557	Monodelphis_domestica
ENSTRUG00000010493	rcl1	100	87.366	ENSMALG00000018618	rcl1	100	87.366	Monopterus_albus
ENSTRUG00000010493	rcl1	99	78.649	MGP_CAROLIEiJ_G0022853	Rcl1	99	78.649	Mus_caroli
ENSTRUG00000010493	rcl1	99	78.108	ENSMUSG00000024785	Rcl1	99	78.108	Mus_musculus
ENSTRUG00000010493	rcl1	99	78.919	MGP_PahariEiJ_G0014346	Rcl1	100	79.532	Mus_pahari
ENSTRUG00000010493	rcl1	99	78.108	MGP_SPRETEiJ_G0023771	Rcl1	100	78.947	Mus_spretus
ENSTRUG00000010493	rcl1	99	78.919	ENSMPUG00000004998	RCL1	99	78.919	Mustela_putorius_furo
ENSTRUG00000010493	rcl1	99	77.568	ENSMLUG00000009654	RCL1	99	77.568	Myotis_lucifugus
ENSTRUG00000010493	rcl1	99	78.919	ENSNGAG00000015327	Rcl1	99	78.919	Nannospalax_galili
ENSTRUG00000010493	rcl1	92	85.423	ENSNBRG00000019854	rcl1	100	80.926	Neolamprologus_brichardi
ENSTRUG00000010493	rcl1	99	76.216	ENSNLEG00000008891	RCL1	99	76.216	Nomascus_leucogenys
ENSTRUG00000010493	rcl1	99	71.622	ENSMEUG00000007653	RCL1	99	71.622	Notamacropus_eugenii
ENSTRUG00000010493	rcl1	99	77.297	ENSOPRG00000010965	RCL1	99	77.297	Ochotona_princeps
ENSTRUG00000010493	rcl1	88	68.085	ENSODEG00000004151	RCL1	96	68.085	Octodon_degus
ENSTRUG00000010493	rcl1	100	87.634	ENSONIG00000003871	rcl1	100	87.634	Oreochromis_niloticus
ENSTRUG00000010493	rcl1	67	73.518	ENSOANG00000013193	-	98	74.699	Ornithorhynchus_anatinus
ENSTRUG00000010493	rcl1	99	78.108	ENSOCUG00000008161	RCL1	99	78.108	Oryctolagus_cuniculus
ENSTRUG00000010493	rcl1	100	85.215	ENSORLG00000010443	rcl1	100	85.215	Oryzias_latipes
ENSTRUG00000010493	rcl1	100	85.484	ENSORLG00020012211	rcl1	100	85.484	Oryzias_latipes_hni
ENSTRUG00000010493	rcl1	100	84.946	ENSORLG00015001122	rcl1	100	84.946	Oryzias_latipes_hsok
ENSTRUG00000010493	rcl1	100	86.290	ENSOMEG00000022976	rcl1	88	86.290	Oryzias_melastigma
ENSTRUG00000010493	rcl1	99	78.108	ENSOGAG00000007480	RCL1	99	78.108	Otolemur_garnettii
ENSTRUG00000010493	rcl1	99	78.919	ENSOARG00000013463	RCL1	99	78.919	Ovis_aries
ENSTRUG00000010493	rcl1	99	78.378	ENSPPAG00000037958	RCL1	99	78.378	Pan_paniscus
ENSTRUG00000010493	rcl1	99	78.108	ENSPPRG00000022645	RCL1	99	78.108	Panthera_pardus
ENSTRUG00000010493	rcl1	88	79.511	ENSPTIG00000019031	RCL1	100	80.556	Panthera_tigris_altaica
ENSTRUG00000010493	rcl1	99	78.108	ENSPTRG00000020743	RCL1	97	80.769	Pan_troglodytes
ENSTRUG00000010493	rcl1	99	78.378	ENSPANG00000025151	RCL1	99	78.378	Papio_anubis
ENSTRUG00000010493	rcl1	100	78.495	ENSPKIG00000021022	rcl1	100	78.495	Paramormyrops_kingsleyae
ENSTRUG00000010493	rcl1	88	75.076	ENSPSIG00000012302	RCL1	100	75.076	Pelodiscus_sinensis
ENSTRUG00000010493	rcl1	100	86.559	ENSPMGG00000024007	rcl1	100	86.559	Periophthalmus_magnuspinnatus
ENSTRUG00000010493	rcl1	99	78.919	ENSPEMG00000023275	Rcl1	99	78.919	Peromyscus_maniculatus_bairdii
ENSTRUG00000010493	rcl1	99	77.838	ENSPCIG00000000188	RCL1	99	77.838	Phascolarctos_cinereus
ENSTRUG00000010493	rcl1	100	88.710	ENSPFOG00000019682	rcl1	99	88.710	Poecilia_formosa
ENSTRUG00000010493	rcl1	100	88.710	ENSPLAG00000022354	rcl1	100	88.710	Poecilia_latipinna
ENSTRUG00000010493	rcl1	100	88.710	ENSPMEG00000008131	rcl1	100	88.710	Poecilia_mexicana
ENSTRUG00000010493	rcl1	100	88.172	ENSPREG00000008032	rcl1	100	88.172	Poecilia_reticulata
ENSTRUG00000010493	rcl1	99	78.919	ENSPPYG00000019244	RCL1	99	78.919	Pongo_abelii
ENSTRUG00000010493	rcl1	99	72.432	ENSPCAG00000001440	RCL1	99	72.432	Procavia_capensis
ENSTRUG00000010493	rcl1	99	78.919	ENSPCOG00000009611	RCL1	97	81.319	Propithecus_coquereli
ENSTRUG00000010493	rcl1	99	78.378	ENSPVAG00000015752	RCL1	99	78.378	Pteropus_vampyrus
ENSTRUG00000010493	rcl1	100	87.097	ENSPNYG00000012910	rcl1	100	87.097	Pundamilia_nyererei
ENSTRUG00000010493	rcl1	99	81.793	ENSPNAG00000028307	rcl1	91	81.793	Pygocentrus_nattereri
ENSTRUG00000010493	rcl1	99	77.838	ENSRNOG00000015491	Rcl1	99	77.838	Rattus_norvegicus
ENSTRUG00000010493	rcl1	99	78.108	ENSRBIG00000035818	RCL1	99	78.108	Rhinopithecus_bieti
ENSTRUG00000010493	rcl1	99	78.378	ENSRROG00000029781	RCL1	97	80.769	Rhinopithecus_roxellana
ENSTRUG00000010493	rcl1	98	37.398	YOL010W	-	97	37.398	Saccharomyces_cerevisiae
ENSTRUG00000010493	rcl1	99	78.649	ENSSBOG00000026369	RCL1	97	80.874	Saimiri_boliviensis_boliviensis
ENSTRUG00000010493	rcl1	89	78.248	ENSSHAG00000014086	RCL1	100	78.248	Sarcophilus_harrisii
ENSTRUG00000010493	rcl1	100	77.419	ENSSFOG00015023020	rcl1	100	77.419	Scleropages_formosus
ENSTRUG00000010493	rcl1	100	88.172	ENSSMAG00000019751	rcl1	86	88.172	Scophthalmus_maximus
ENSTRUG00000010493	rcl1	100	88.172	ENSSDUG00000006349	rcl1	100	88.172	Seriola_dumerili
ENSTRUG00000010493	rcl1	100	87.366	ENSSLDG00000022076	rcl1	100	87.366	Seriola_lalandi_dorsalis
ENSTRUG00000010493	rcl1	99	78.649	ENSSARG00000009260	RCL1	99	78.649	Sorex_araneus
ENSTRUG00000010493	rcl1	99	74.865	ENSSPUG00000016330	RCL1	99	74.865	Sphenodon_punctatus
ENSTRUG00000010493	rcl1	100	88.172	ENSSPAG00000018038	rcl1	100	88.172	Stegastes_partitus
ENSTRUG00000010493	rcl1	99	78.919	ENSSSCG00000005217	RCL1	82	78.919	Sus_scrofa
ENSTRUG00000010493	rcl1	99	73.171	ENSTGUG00000005138	RCL1	98	73.171	Taeniopygia_guttata
ENSTRUG00000010493	rcl1	100	92.204	ENSTNIG00000013214	rcl1	99	92.204	Tetraodon_nigroviridis
ENSTRUG00000010493	rcl1	99	74.595	ENSTBEG00000016339	RCL1	99	74.595	Tupaia_belangeri
ENSTRUG00000010493	rcl1	99	78.378	ENSTTRG00000016525	RCL1	99	78.378	Tursiops_truncatus
ENSTRUG00000010493	rcl1	99	79.730	ENSUAMG00000005598	RCL1	99	80.938	Ursus_americanus
ENSTRUG00000010493	rcl1	88	80.183	ENSUMAG00000017890	RCL1	97	80.183	Ursus_maritimus
ENSTRUG00000010493	rcl1	88	79.878	ENSVPAG00000009188	RCL1	100	79.878	Vicugna_pacos
ENSTRUG00000010493	rcl1	88	81.155	ENSVVUG00000007304	RCL1	89	81.155	Vulpes_vulpes
ENSTRUG00000010493	rcl1	100	70.133	ENSXETG00000000592	rcl1	100	70.133	Xenopus_tropicalis
ENSTRUG00000010493	rcl1	100	88.978	ENSXCOG00000004922	rcl1	100	88.978	Xiphophorus_couchianus
ENSTRUG00000010493	rcl1	100	88.978	ENSXMAG00000022366	RCL1	100	88.978	Xiphophorus_maculatus