EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000010529 (Gene tree)
Gene ID: 101078845
Gene Symbol: srsf7a
Alias: fb39b02|wu:fb39b02|zgc:77155
Full Name: serine and arginine rich splicing factor 7
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5809 bases
Position: chr11:9888118-9893926
Accession: 101078845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000026586	RRM_1	PF00076.22	1.7e-15	1	1
ENSTRUP00000026588	RRM_1	PF00076.22	1.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000026695	-	1062	-	ENSTRUP00000026588	252 (aa)	-	H2TPI2
ENSTRUT00000026693	-	1975	XM_003968704	ENSTRUP00000026586	239 (aa)	XP_003968753	H2TPI0

Gene Model

Click here to download ENSTRUG00000010529's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG
tru05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000010529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000010529	srsf7a	50	73.770	ENSG00000115875	SRSF7	84	77.477	Homo_sapiens
ENSTRUG00000010529	srsf7a	100	95.652	ENSAPOG00000023586	srsf7a	100	95.652	Acanthochromis_polyacanthus
ENSTRUG00000010529	srsf7a	100	96.443	ENSAOCG00000012705	srsf7a	100	96.443	Amphiprion_ocellaris
ENSTRUG00000010529	srsf7a	100	96.443	ENSAPEG00000017818	srsf7a	100	96.443	Amphiprion_percula
ENSTRUG00000010529	srsf7a	96	95.868	ENSATEG00000004691	srsf7a	95	95.868	Anabas_testudineus
ENSTRUG00000010529	srsf7a	56	74.074	ENSAPLG00000012167	-	51	76.786	Anas_platyrhynchos
ENSTRUG00000010529	srsf7a	100	96.063	ENSACLG00000014716	srsf7a	100	96.063	Astatotilapia_calliptera
ENSTRUG00000010529	srsf7a	51	72.358	ENSAMXG00000007005	srsf7b	54	74.336	Astyanax_mexicanus
ENSTRUG00000010529	srsf7a	62	53.020	ENSAMXG00000033364	srsf3a	54	73.256	Astyanax_mexicanus
ENSTRUG00000010529	srsf7a	51	73.171	ENSBTAG00000014891	SRSF7	81	77.477	Bos_taurus
ENSTRUG00000010529	srsf7a	67	48.447	ENSCSEG00000002271	srsf3b	73	69.072	Cynoglossus_semilaevis
ENSTRUG00000010529	srsf7a	54	96.154	ENSCSEG00000006378	srsf7a	79	98.198	Cynoglossus_semilaevis
ENSTRUG00000010529	srsf7a	59	56.028	ENSCVAG00000009865	-	56	74.118	Cyprinodon_variegatus
ENSTRUG00000010529	srsf7a	51	92.683	ENSCVAG00000020083	srsf7a	95	84.211	Cyprinodon_variegatus
ENSTRUG00000010529	srsf7a	95	68.487	ENSDARG00000035325	srsf7a	99	87.097	Danio_rerio
ENSTRUG00000010529	srsf7a	67	50.000	ENSEBUG00000002677	-	86	52.703	Eptatretus_burgeri
ENSTRUG00000010529	srsf7a	50	69.355	ENSELUG00000018155	srsf7b	80	74.775	Esox_lucius
ENSTRUG00000010529	srsf7a	68	52.147	ENSELUG00000014357	SRSF3	58	69.149	Esox_lucius
ENSTRUG00000010529	srsf7a	62	53.020	ENSFHEG00000005368	srsf3b	68	74.118	Fundulus_heteroclitus
ENSTRUG00000010529	srsf7a	54	93.798	ENSFHEG00000007159	srsf7a	70	93.798	Fundulus_heteroclitus
ENSTRUG00000010529	srsf7a	54	66.923	ENSGAFG00000008856	srsf7b	81	71.681	Gambusia_affinis
ENSTRUG00000010529	srsf7a	76	48.634	ENSGAGG00000003553	SRSF7	81	79.279	Gopherus_agassizii
ENSTRUG00000010529	srsf7a	100	96.063	ENSHBUG00000001795	srsf7a	100	96.063	Haplochromis_burtoni
ENSTRUG00000010529	srsf7a	61	53.061	ENSHCOG00000017795	-	51	70.588	Hippocampus_comes
ENSTRUG00000010529	srsf7a	51	70.732	ENSIPUG00000011708	srsf7	63	74.775	Ictalurus_punctatus
ENSTRUG00000010529	srsf7a	57	56.835	ENSJJAG00000020230	-	68	62.162	Jaculus_jaculus
ENSTRUG00000010529	srsf7a	96	90.164	ENSKMAG00000002322	srsf7a	95	92.181	Kryptolebias_marmoratus
ENSTRUG00000010529	srsf7a	62	51.007	ENSLBEG00000013364	srsf3b	73	72.941	Labrus_bergylta
ENSTRUG00000010529	srsf7a	72	69.364	ENSLACG00000018688	srsf7a	54	86.607	Latimeria_chalumnae
ENSTRUG00000010529	srsf7a	50	73.770	ENSMFAG00000001980	SRSF7	81	77.477	Macaca_fascicularis
ENSTRUG00000010529	srsf7a	96	95.041	ENSMAMG00000017197	srsf7a	95	95.041	Mastacembelus_armatus
ENSTRUG00000010529	srsf7a	100	96.063	ENSMZEG00005024627	srsf7a	100	96.063	Maylandia_zebra
ENSTRUG00000010529	srsf7a	71	46.471	ENSMAUG00000011430	-	54	60.241	Mesocricetus_auratus
ENSTRUG00000010529	srsf7a	51	97.561	ENSMMOG00000005208	srsf7a	74	98.198	Mola_mola
ENSTRUG00000010529	srsf7a	96	93.388	ENSMALG00000012722	srsf7a	95	93.388	Monopterus_albus
ENSTRUG00000010529	srsf7a	56	47.407	ENSMALG00000018059	srsf3b	52	74.118	Monopterus_albus
ENSTRUG00000010529	srsf7a	62	51.333	ENSMUSG00000078134	Gm12355	75	47.134	Mus_musculus
ENSTRUG00000010529	srsf7a	62	51.923	ENSMLUG00000010671	-	52	74.118	Myotis_lucifugus
ENSTRUG00000010529	srsf7a	67	96.296	ENSNBRG00000006601	srsf7a	73	98.198	Neolamprologus_brichardi
ENSTRUG00000010529	srsf7a	61	50.685	ENSNLEG00000030606	-	75	39.610	Nomascus_leucogenys
ENSTRUG00000010529	srsf7a	68	54.878	ENSORLG00015004309	srsf3b	51	74.118	Oryzias_latipes_hsok
ENSTRUG00000010529	srsf7a	62	49.664	ENSOMEG00000014893	srsf3b	64	69.072	Oryzias_melastigma
ENSTRUG00000010529	srsf7a	60	65.101	ENSPKIG00000017425	srsf7b	63	77.477	Paramormyrops_kingsleyae
ENSTRUG00000010529	srsf7a	59	64.336	ENSPMAG00000004472	srsf7a	54	73.585	Petromyzon_marinus
ENSTRUG00000010529	srsf7a	51	72.358	ENSPCIG00000020726	-	82	76.577	Phascolarctos_cinereus
ENSTRUG00000010529	srsf7a	52	96.774	ENSPREG00000020685	srsf7a	98	96.774	Poecilia_reticulata
ENSTRUG00000010529	srsf7a	50	75.410	ENSPCOG00000019422	-	52	79.279	Propithecus_coquereli
ENSTRUG00000010529	srsf7a	100	96.063	ENSPNYG00000005994	srsf7a	100	96.063	Pundamilia_nyererei
ENSTRUG00000010529	srsf7a	62	53.020	ENSSMAG00000000387	srsf3b	60	69.072	Scophthalmus_maximus
ENSTRUG00000010529	srsf7a	100	96.047	ENSSDUG00000003389	srsf7a	100	96.047	Seriola_dumerili
ENSTRUG00000010529	srsf7a	51	71.774	ENSSDUG00000021338	srsf7b	78	75.676	Seriola_dumerili
ENSTRUG00000010529	srsf7a	100	96.047	ENSSLDG00000007715	srsf7a	100	96.047	Seriola_lalandi_dorsalis
ENSTRUG00000010529	srsf7a	50	72.727	ENSSPAG00000017204	srsf7b	79	75.676	Stegastes_partitus
ENSTRUG00000010529	srsf7a	54	96.899	ENSSPAG00000022192	srsf7a	99	97.581	Stegastes_partitus
ENSTRUG00000010529	srsf7a	51	73.171	ENSSSCG00000008484	SRSF7	81	77.477	Sus_scrofa
ENSTRUG00000010529	srsf7a	59	53.741	ENSVVUG00000006092	-	69	65.278	Vulpes_vulpes
ENSTRUG00000010529	srsf7a	51	97.561	ENSXCOG00000009381	srsf7a	97	97.561	Xiphophorus_couchianus
ENSTRUG00000010529	srsf7a	96	89.796	ENSXMAG00000003050	srsf7a	95	78.776	Xiphophorus_maculatus
ENSTRUG00000010529	srsf7a	62	53.020	ENSXMAG00000001097	srsf3b	68	74.118	Xiphophorus_maculatus