EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000010698 (Gene tree)
Gene ID: 101064714
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4986 bases
Position: chr18:7843831-7848816
Accession: 101064714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000026991	RRM_1	PF00076.22	1.3e-05	1	1
ENSTRUP00000057308	RRM_1	PF00076.22	1.4e-05	1	1
ENSTRUP00000057308	G-patch	PF01585.23	3.5e-13	1	1
ENSTRUP00000026991	G-patch	PF01585.23	4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000049234	-	2712	XM_011613524	ENSTRUP00000057308	420 (aa)	XP_011611826	UPI000065F531
ENSTRUT00000027100	-	1212	-	ENSTRUP00000026991	403 (aa)	-	H2TQN4

Gene Model

Click here to download ENSTRUG00000010698's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000010698's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000010698	rbm17	100	82.512	ENSG00000134453	RBM17	100	82.512	Homo_sapiens
ENSTRUG00000010698	rbm17	99	92.500	ENSAPOG00000007101	rbm17	99	92.500	Acanthochromis_polyacanthus
ENSTRUG00000010698	rbm17	100	82.759	ENSAMEG00000002107	RBM17	100	82.759	Ailuropoda_melanoleuca
ENSTRUG00000010698	rbm17	100	89.630	ENSACIG00000006251	rbm17	100	89.630	Amphilophus_citrinellus
ENSTRUG00000010698	rbm17	100	92.327	ENSAOCG00000014892	rbm17	100	92.327	Amphiprion_ocellaris
ENSTRUG00000010698	rbm17	100	92.327	ENSAPEG00000022779	rbm17	100	92.327	Amphiprion_percula
ENSTRUG00000010698	rbm17	100	90.499	ENSATEG00000004406	rbm17	100	90.499	Anabas_testudineus
ENSTRUG00000010698	rbm17	100	82.555	ENSAPLG00000004190	RBM17	100	82.555	Anas_platyrhynchos
ENSTRUG00000010698	rbm17	89	78.723	ENSACAG00000005418	RBM17	99	78.723	Anolis_carolinensis
ENSTRUG00000010698	rbm17	100	70.660	ENSANAG00000019330	-	97	84.746	Aotus_nancymaae
ENSTRUG00000010698	rbm17	100	83.005	ENSANAG00000030127	RBM17	100	83.005	Aotus_nancymaae
ENSTRUG00000010698	rbm17	100	88.614	ENSACLG00000003928	rbm17	100	88.614	Astatotilapia_calliptera
ENSTRUG00000010698	rbm17	100	81.797	ENSAMXG00000005853	rbm17	100	82.033	Astyanax_mexicanus
ENSTRUG00000010698	rbm17	100	81.281	ENSBTAG00000011094	-	100	81.281	Bos_taurus
ENSTRUG00000010698	rbm17	100	82.512	ENSBTAG00000021951	RBM17	100	82.512	Bos_taurus
ENSTRUG00000010698	rbm17	85	32.778	WBGene00010233	F58B3.7	97	32.847	Caenorhabditis_elegans
ENSTRUG00000010698	rbm17	100	83.005	ENSCJAG00000020573	RBM17	100	83.005	Callithrix_jacchus
ENSTRUG00000010698	rbm17	100	82.759	ENSCAFG00000005206	RBM17	100	82.759	Canis_familiaris
ENSTRUG00000010698	rbm17	100	77.475	ENSCAFG00020005420	RBM17	100	79.703	Canis_lupus_dingo
ENSTRUG00000010698	rbm17	100	80.296	ENSCHIG00000019921	-	100	80.296	Capra_hircus
ENSTRUG00000010698	rbm17	100	82.512	ENSCHIG00000023204	-	100	82.512	Capra_hircus
ENSTRUG00000010698	rbm17	100	82.439	ENSTSYG00000001165	RBM17	95	91.150	Carlito_syrichta
ENSTRUG00000010698	rbm17	96	62.660	ENSCAPG00000006275	RBM17	100	68.464	Cavia_aperea
ENSTRUG00000010698	rbm17	100	77.506	ENSCPOG00000005679	RBM17	100	79.319	Cavia_porcellus
ENSTRUG00000010698	rbm17	100	83.005	ENSCCAG00000018655	RBM17	100	83.005	Cebus_capucinus
ENSTRUG00000010698	rbm17	100	82.512	ENSCATG00000041566	RBM17	100	82.512	Cercocebus_atys
ENSTRUG00000010698	rbm17	100	81.707	ENSCLAG00000012195	RBM17	99	81.707	Chinchilla_lanigera
ENSTRUG00000010698	rbm17	100	82.512	ENSCSAG00000013564	RBM17	100	82.512	Chlorocebus_sabaeus
ENSTRUG00000010698	rbm17	92	65.333	ENSCHOG00000005131	RBM17	100	65.333	Choloepus_hoffmanni
ENSTRUG00000010698	rbm17	100	82.555	ENSCPBG00000019836	RBM17	100	82.555	Chrysemys_picta_bellii
ENSTRUG00000010698	rbm17	100	46.247	ENSCSAVG00000008782	-	100	46.247	Ciona_savignyi
ENSTRUG00000010698	rbm17	100	82.266	ENSCANG00000030987	RBM17	98	84.496	Colobus_angolensis_palliatus
ENSTRUG00000010698	rbm17	98	73.537	ENSCANG00000023715	-	99	73.537	Colobus_angolensis_palliatus
ENSTRUG00000010698	rbm17	100	64.619	ENSCGRG00001009256	-	100	63.882	Cricetulus_griseus_chok1gshd
ENSTRUG00000010698	rbm17	100	82.195	ENSCGRG00001013842	Rbm17	100	82.195	Cricetulus_griseus_chok1gshd
ENSTRUG00000010698	rbm17	100	82.195	ENSCGRG00000006907	Rbm17	100	82.195	Cricetulus_griseus_crigri
ENSTRUG00000010698	rbm17	100	86.386	ENSCSEG00000018164	rbm17	100	86.386	Cynoglossus_semilaevis
ENSTRUG00000010698	rbm17	100	83.127	ENSCVAG00000002476	rbm17	100	84.615	Cyprinodon_variegatus
ENSTRUG00000010698	rbm17	100	77.305	ENSDARG00000031346	rbm17	100	80.189	Danio_rerio
ENSTRUG00000010698	rbm17	100	82.512	ENSDNOG00000035920	RBM17	100	82.512	Dasypus_novemcinctus
ENSTRUG00000010698	rbm17	99	36.580	FBgn0086683	Spf45	99	35.619	Drosophila_melanogaster
ENSTRUG00000010698	rbm17	86	83.099	ENSETEG00000006642	RBM17	87	83.099	Echinops_telfairi
ENSTRUG00000010698	rbm17	62	69.048	ENSEBUG00000010253	rbm17	82	69.048	Eptatretus_burgeri
ENSTRUG00000010698	rbm17	100	76.528	ENSEASG00005019205	-	100	78.484	Equus_asinus_asinus
ENSTRUG00000010698	rbm17	92	80.000	ENSEASG00005009236	-	100	80.000	Equus_asinus_asinus
ENSTRUG00000010698	rbm17	100	73.153	ENSECAG00000001379	-	100	73.153	Equus_caballus
ENSTRUG00000010698	rbm17	100	69.479	ENSECAG00000008939	RBM17	100	72.030	Equus_caballus
ENSTRUG00000010698	rbm17	86	65.616	ENSEEUG00000013077	RBM17	84	73.196	Erinaceus_europaeus
ENSTRUG00000010698	rbm17	100	82.751	ENSELUG00000006440	rbm17	100	82.751	Esox_lucius
ENSTRUG00000010698	rbm17	100	82.759	ENSFCAG00000031988	RBM17	100	82.759	Felis_catus
ENSTRUG00000010698	rbm17	100	82.020	ENSFALG00000001790	RBM17	100	82.020	Ficedula_albicollis
ENSTRUG00000010698	rbm17	100	81.707	ENSFDAG00000007470	RBM17	100	81.707	Fukomys_damarensis
ENSTRUG00000010698	rbm17	100	89.311	ENSFHEG00000001266	rbm17	100	87.850	Fundulus_heteroclitus
ENSTRUG00000010698	rbm17	99	81.623	ENSGMOG00000008438	rbm17	100	81.623	Gadus_morhua
ENSTRUG00000010698	rbm17	100	82.759	ENSGALG00000006332	RBM17	100	82.759	Gallus_gallus
ENSTRUG00000010698	rbm17	100	90.347	ENSGAFG00000019879	rbm17	100	90.347	Gambusia_affinis
ENSTRUG00000010698	rbm17	99	89.330	ENSGACG00000019174	rbm17	99	89.330	Gasterosteus_aculeatus
ENSTRUG00000010698	rbm17	100	82.555	ENSGAGG00000019906	RBM17	100	82.555	Gopherus_agassizii
ENSTRUG00000010698	rbm17	100	92.327	ENSHBUG00000016624	rbm17	100	92.327	Haplochromis_burtoni
ENSTRUG00000010698	rbm17	100	81.707	ENSHGLG00000011580	RBM17	100	81.707	Heterocephalus_glaber_female
ENSTRUG00000010698	rbm17	100	81.707	ENSHGLG00100010460	RBM17	100	81.707	Heterocephalus_glaber_male
ENSTRUG00000010698	rbm17	100	66.830	ENSHGLG00100010556	-	100	65.848	Heterocephalus_glaber_male
ENSTRUG00000010698	rbm17	99	87.560	ENSHCOG00000010865	rbm17	100	87.560	Hippocampus_comes
ENSTRUG00000010698	rbm17	100	76.941	ENSIPUG00000007699	Rbm17	100	83.059	Ictalurus_punctatus
ENSTRUG00000010698	rbm17	100	81.951	ENSSTOG00000013591	RBM17	100	81.951	Ictidomys_tridecemlineatus
ENSTRUG00000010698	rbm17	100	60.837	ENSJJAG00000000993	-	100	56.863	Jaculus_jaculus
ENSTRUG00000010698	rbm17	100	82.195	ENSJJAG00000022886	Rbm17	100	82.195	Jaculus_jaculus
ENSTRUG00000010698	rbm17	100	88.361	ENSKMAG00000021400	rbm17	100	88.836	Kryptolebias_marmoratus
ENSTRUG00000010698	rbm17	100	92.079	ENSLBEG00000000881	rbm17	100	90.261	Labrus_bergylta
ENSTRUG00000010698	rbm17	99	65.574	ENSLACG00000017297	RBM17	99	66.355	Latimeria_chalumnae
ENSTRUG00000010698	rbm17	100	83.824	ENSLOCG00000015659	rbm17	100	83.824	Lepisosteus_oculatus
ENSTRUG00000010698	rbm17	100	81.311	ENSLAFG00000011629	RBM17	100	81.311	Loxodonta_africana
ENSTRUG00000010698	rbm17	100	82.512	ENSMFAG00000035521	RBM17	100	82.512	Macaca_fascicularis
ENSTRUG00000010698	rbm17	100	82.512	ENSMMUG00000015152	RBM17	100	82.512	Macaca_mulatta
ENSTRUG00000010698	rbm17	100	82.512	ENSMNEG00000017264	RBM17	100	82.512	Macaca_nemestrina
ENSTRUG00000010698	rbm17	100	82.512	ENSMLEG00000029340	RBM17	100	82.512	Mandrillus_leucophaeus
ENSTRUG00000010698	rbm17	100	89.311	ENSMAMG00000000387	rbm17	100	89.311	Mastacembelus_armatus
ENSTRUG00000010698	rbm17	100	90.952	ENSMZEG00005015179	rbm17	100	90.952	Maylandia_zebra
ENSTRUG00000010698	rbm17	100	81.356	ENSMGAG00000003981	RBM17	100	81.356	Meleagris_gallopavo
ENSTRUG00000010698	rbm17	100	82.195	ENSMAUG00000019247	Rbm17	100	82.195	Mesocricetus_auratus
ENSTRUG00000010698	rbm17	100	76.329	ENSMICG00000041489	-	100	76.329	Microcebus_murinus
ENSTRUG00000010698	rbm17	100	82.195	ENSMICG00000003976	-	100	82.195	Microcebus_murinus
ENSTRUG00000010698	rbm17	100	82.195	ENSMOCG00000011847	Rbm17	100	82.195	Microtus_ochrogaster
ENSTRUG00000010698	rbm17	93	64.737	ENSMOCG00000014517	-	99	65.526	Microtus_ochrogaster
ENSTRUG00000010698	rbm17	100	83.088	ENSMMOG00000010264	rbm17	100	83.088	Mola_mola
ENSTRUG00000010698	rbm17	100	81.773	ENSMODG00000016648	RBM17	100	81.773	Monodelphis_domestica
ENSTRUG00000010698	rbm17	100	88.863	ENSMALG00000010597	rbm17	100	89.810	Monopterus_albus
ENSTRUG00000010698	rbm17	100	82.195	MGP_CAROLIEiJ_G0023173	Rbm17	100	82.195	Mus_caroli
ENSTRUG00000010698	rbm17	100	82.195	ENSMUSG00000037197	Rbm17	100	82.195	Mus_musculus
ENSTRUG00000010698	rbm17	100	82.439	MGP_PahariEiJ_G0019233	Rbm17	100	82.439	Mus_pahari
ENSTRUG00000010698	rbm17	100	82.195	MGP_SPRETEiJ_G0024091	Rbm17	100	82.195	Mus_spretus
ENSTRUG00000010698	rbm17	86	80.802	ENSMPUG00000016359	RBM17	96	80.802	Mustela_putorius_furo
ENSTRUG00000010698	rbm17	100	80.535	ENSMLUG00000002302	-	100	80.535	Myotis_lucifugus
ENSTRUG00000010698	rbm17	100	78.624	ENSMLUG00000025709	-	100	78.624	Myotis_lucifugus
ENSTRUG00000010698	rbm17	100	57.882	ENSNGAG00000000663	-	100	58.374	Nannospalax_galili
ENSTRUG00000010698	rbm17	100	82.195	ENSNGAG00000000741	Rbm17	100	82.195	Nannospalax_galili
ENSTRUG00000010698	rbm17	100	86.139	ENSNBRG00000018148	rbm17	100	86.139	Neolamprologus_brichardi
ENSTRUG00000010698	rbm17	100	82.512	ENSNLEG00000033350	RBM17	100	82.512	Nomascus_leucogenys
ENSTRUG00000010698	rbm17	100	76.355	ENSMEUG00000011347	RBM17	100	76.355	Notamacropus_eugenii
ENSTRUG00000010698	rbm17	100	71.675	ENSOPRG00000002993	RBM17	100	71.675	Ochotona_princeps
ENSTRUG00000010698	rbm17	97	62.278	ENSODEG00000007286	-	99	62.278	Octodon_degus
ENSTRUG00000010698	rbm17	100	81.509	ENSODEG00000004393	RBM17	100	81.509	Octodon_degus
ENSTRUG00000010698	rbm17	100	91.872	ENSONIG00000011838	rbm17	100	91.872	Oreochromis_niloticus
ENSTRUG00000010698	rbm17	100	81.127	ENSOANG00000015455	RBM17	100	81.618	Ornithorhynchus_anatinus
ENSTRUG00000010698	rbm17	100	89.786	ENSORLG00000028798	rbm17	100	89.786	Oryzias_latipes
ENSTRUG00000010698	rbm17	100	89.786	ENSORLG00020004593	rbm17	98	89.786	Oryzias_latipes_hni
ENSTRUG00000010698	rbm17	100	91.832	ENSORLG00015000033	rbm17	100	91.832	Oryzias_latipes_hsok
ENSTRUG00000010698	rbm17	100	90.261	ENSOMEG00000012060	rbm17	100	93.082	Oryzias_melastigma
ENSTRUG00000010698	rbm17	100	82.439	ENSOGAG00000015687	RBM17	100	82.439	Otolemur_garnettii
ENSTRUG00000010698	rbm17	100	82.512	ENSOARG00000012975	RBM17	100	82.512	Ovis_aries
ENSTRUG00000010698	rbm17	100	82.512	ENSPPAG00000032347	RBM17	100	82.512	Pan_paniscus
ENSTRUG00000010698	rbm17	100	82.759	ENSPPRG00000010706	RBM17	100	82.759	Panthera_pardus
ENSTRUG00000010698	rbm17	100	82.759	ENSPTIG00000007596	RBM17	100	82.759	Panthera_tigris_altaica
ENSTRUG00000010698	rbm17	100	82.512	ENSPTRG00000002265	RBM17	100	82.512	Pan_troglodytes
ENSTRUG00000010698	rbm17	100	82.512	ENSPANG00000023425	RBM17	100	82.512	Papio_anubis
ENSTRUG00000010698	rbm17	100	78.322	ENSPKIG00000005048	-	100	78.788	Paramormyrops_kingsleyae
ENSTRUG00000010698	rbm17	100	80.796	ENSPKIG00000025526	rbm17	100	80.796	Paramormyrops_kingsleyae
ENSTRUG00000010698	rbm17	100	81.463	ENSPSIG00000012332	RBM17	100	81.463	Pelodiscus_sinensis
ENSTRUG00000010698	rbm17	100	86.634	ENSPMGG00000007980	rbm17	100	86.634	Periophthalmus_magnuspinnatus
ENSTRUG00000010698	rbm17	100	82.195	ENSPEMG00000014320	Rbm17	100	82.195	Peromyscus_maniculatus_bairdii
ENSTRUG00000010698	rbm17	100	81.373	ENSPCIG00000019260	-	100	81.373	Phascolarctos_cinereus
ENSTRUG00000010698	rbm17	100	89.786	ENSPFOG00000013271	rbm17	100	89.786	Poecilia_formosa
ENSTRUG00000010698	rbm17	100	89.786	ENSPLAG00000004455	rbm17	100	89.786	Poecilia_latipinna
ENSTRUG00000010698	rbm17	100	91.337	ENSPMEG00000014864	rbm17	100	91.337	Poecilia_mexicana
ENSTRUG00000010698	rbm17	100	89.311	ENSPREG00000015589	rbm17	100	89.311	Poecilia_reticulata
ENSTRUG00000010698	rbm17	99	62.129	ENSPPYG00000019881	-	100	62.129	Pongo_abelii
ENSTRUG00000010698	rbm17	100	82.512	ENSPPYG00000002067	RBM17	100	82.512	Pongo_abelii
ENSTRUG00000010698	rbm17	81	59.633	ENSPPYG00000019042	-	99	59.133	Pongo_abelii
ENSTRUG00000010698	rbm17	100	75.123	ENSPCAG00000016879	RBM17	100	75.123	Procavia_capensis
ENSTRUG00000010698	rbm17	100	83.005	ENSPCOG00000027881	RBM17	100	83.005	Propithecus_coquereli
ENSTRUG00000010698	rbm17	100	73.892	ENSPVAG00000015499	RBM17	100	73.892	Pteropus_vampyrus
ENSTRUG00000010698	rbm17	100	80.198	ENSPNYG00000015274	rbm17	100	81.188	Pundamilia_nyererei
ENSTRUG00000010698	rbm17	100	82.270	ENSPNAG00000030046	rbm17	100	82.506	Pygocentrus_nattereri
ENSTRUG00000010698	rbm17	100	82.195	ENSRNOG00000018767	Rbm17	100	82.195	Rattus_norvegicus
ENSTRUG00000010698	rbm17	100	82.512	ENSRBIG00000043727	RBM17	100	82.512	Rhinopithecus_bieti
ENSTRUG00000010698	rbm17	100	82.512	ENSRROG00000044142	RBM17	100	82.512	Rhinopithecus_roxellana
ENSTRUG00000010698	rbm17	100	73.710	ENSSBOG00000023653	-	100	73.464	Saimiri_boliviensis_boliviensis
ENSTRUG00000010698	rbm17	100	82.759	ENSSBOG00000031661	-	100	82.759	Saimiri_boliviensis_boliviensis
ENSTRUG00000010698	rbm17	100	81.773	ENSSHAG00000012480	-	100	81.773	Sarcophilus_harrisii
ENSTRUG00000010698	rbm17	100	82.598	ENSSFOG00015009892	rbm17	100	83.088	Scleropages_formosus
ENSTRUG00000010698	rbm17	100	85.648	ENSSMAG00000012368	rbm17	100	85.648	Scophthalmus_maximus
ENSTRUG00000010698	rbm17	100	89.563	ENSSDUG00000015015	rbm17	100	90.534	Seriola_dumerili
ENSTRUG00000010698	rbm17	100	89.563	ENSSLDG00000014486	rbm17	100	90.534	Seriola_lalandi_dorsalis
ENSTRUG00000010698	rbm17	50	78.182	ENSSARG00000001792	-	79	87.654	Sorex_araneus
ENSTRUG00000010698	rbm17	99	83.251	ENSSPUG00000001036	RBM17	99	83.251	Sphenodon_punctatus
ENSTRUG00000010698	rbm17	100	92.327	ENSSPAG00000002338	rbm17	100	92.327	Stegastes_partitus
ENSTRUG00000010698	rbm17	100	82.266	ENSSSCG00000011134	RBM17	100	82.266	Sus_scrofa
ENSTRUG00000010698	rbm17	100	81.220	ENSTGUG00000002013	RBM17	100	81.220	Taeniopygia_guttata
ENSTRUG00000010698	rbm17	100	95.567	ENSTNIG00000006892	rbm17	100	95.567	Tetraodon_nigroviridis
ENSTRUG00000010698	rbm17	100	63.861	ENSTBEG00000014686	RBM17	100	65.517	Tupaia_belangeri
ENSTRUG00000010698	rbm17	90	81.644	ENSTTRG00000001344	RBM17	100	81.644	Tursiops_truncatus
ENSTRUG00000010698	rbm17	100	77.475	ENSUAMG00000009499	RBM17	100	80.446	Ursus_americanus
ENSTRUG00000010698	rbm17	100	82.759	ENSUMAG00000012237	RBM17	100	82.759	Ursus_maritimus
ENSTRUG00000010698	rbm17	100	70.936	ENSVPAG00000005497	RBM17	100	70.936	Vicugna_pacos
ENSTRUG00000010698	rbm17	100	77.475	ENSVVUG00000006780	RBM17	100	79.703	Vulpes_vulpes
ENSTRUG00000010698	rbm17	99	78.218	ENSXETG00000018123	rbm17	100	78.218	Xenopus_tropicalis
ENSTRUG00000010698	rbm17	100	91.089	ENSXMAG00000008674	rbm17	100	91.089	Xiphophorus_maculatus