EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000010711 (Gene tree)
Gene ID: 101072992
Gene Symbol: ddx42
Alias: im:7148194|si:dkey-15n1.10|zgc:111815
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 6145 bases
Position: chr5:11334981-11341125
Accession: 101072992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000053323	ResIII	PF04851.15	2.9e-07	1	1
ENSTRUP00000027019	ResIII	PF04851.15	9.8e-07	1	1
ENSTRUP00000053323	DEAD	PF00270.29	8.8e-49	1	1
ENSTRUP00000027019	DEAD	PF00270.29	2.8e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000027128	-	3484	XM_003964958	ENSTRUP00000027019	954 (aa)	XP_003965007	H2TQR2
ENSTRUT00000053174	-	1344	-	ENSTRUP00000053323	447 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000010711's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000010711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000010711	ddx42	75	44.186	ENSTRUG00000008878	ddx46	55	39.646
ENSTRUG00000010711	ddx42	53	37.597	ENSTRUG00000003862	-	67	36.401
ENSTRUG00000010711	ddx42	54	45.833	ENSTRUG00000021931	si:dkey-156n14.5	67	41.920
ENSTRUG00000010711	ddx42	51	31.174	ENSTRUG00000017071	ddx52	57	31.841
ENSTRUG00000010711	ddx42	53	36.822	ENSTRUG00000014001	-	74	37.053
ENSTRUG00000010711	ddx42	54	47.500	ENSTRUG00000002356	DDX5	69	42.664
ENSTRUG00000010711	ddx42	55	41.085	ENSTRUG00000012795	ddx43	69	38.689
ENSTRUG00000010711	ddx42	52	39.224	ENSTRUG00000010162	ddx59	72	32.957
ENSTRUG00000010711	ddx42	55	46.531	ENSTRUG00000009308	ddx5	71	42.130
ENSTRUG00000010711	ddx42	54	47.083	ENSTRUG00000009294	-	86	41.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000010711	ddx42	99	81.556	ENSG00000198231	DDX42	98	77.670	Homo_sapiens
ENSTRUG00000010711	ddx42	99	91.480	ENSAPOG00000017675	ddx42	99	85.617	Acanthochromis_polyacanthus
ENSTRUG00000010711	ddx42	99	81.333	ENSAMEG00000003200	DDX42	100	69.649	Ailuropoda_melanoleuca
ENSTRUG00000010711	ddx42	66	96.928	ENSACIG00000007376	ddx42	99	85.117	Amphilophus_citrinellus
ENSTRUG00000010711	ddx42	99	91.480	ENSAOCG00000003520	ddx42	100	83.731	Amphiprion_ocellaris
ENSTRUG00000010711	ddx42	99	91.480	ENSAPEG00000000984	ddx42	100	84.858	Amphiprion_percula
ENSTRUG00000010711	ddx42	99	90.337	ENSATEG00000022920	ddx42	100	84.759	Anabas_testudineus
ENSTRUG00000010711	ddx42	99	80.667	ENSAPLG00000010544	DDX42	99	70.085	Anas_platyrhynchos
ENSTRUG00000010711	ddx42	99	80.889	ENSACAG00000003994	DDX42	99	69.979	Anolis_carolinensis
ENSTRUG00000010711	ddx42	99	81.556	ENSANAG00000035693	DDX42	92	79.878	Aotus_nancymaae
ENSTRUG00000010711	ddx42	99	89.933	ENSACLG00000025113	ddx42	100	83.846	Astatotilapia_calliptera
ENSTRUG00000010711	ddx42	94	85.047	ENSAMXG00000011435	ddx42	100	73.542	Astyanax_mexicanus
ENSTRUG00000010711	ddx42	99	77.899	ENSBTAG00000021058	DDX42	91	78.811	Bos_taurus
ENSTRUG00000010711	ddx42	74	56.012	WBGene00008119	C46F11.4	86	48.974	Caenorhabditis_elegans
ENSTRUG00000010711	ddx42	99	81.556	ENSCJAG00000019649	DDX42	96	81.660	Callithrix_jacchus
ENSTRUG00000010711	ddx42	99	81.333	ENSCAFG00000012818	DDX42	99	69.989	Canis_familiaris
ENSTRUG00000010711	ddx42	99	81.333	ENSCAFG00020026631	DDX42	99	69.989	Canis_lupus_dingo
ENSTRUG00000010711	ddx42	99	79.650	ENSCHIG00000014431	DDX42	100	72.039	Capra_hircus
ENSTRUG00000010711	ddx42	99	81.111	ENSTSYG00000001380	DDX42	100	69.149	Carlito_syrichta
ENSTRUG00000010711	ddx42	65	75.258	ENSCAPG00000013621	DDX42	87	61.695	Cavia_aperea
ENSTRUG00000010711	ddx42	99	80.889	ENSCPOG00000005633	DDX42	99	70.677	Cavia_porcellus
ENSTRUG00000010711	ddx42	99	72.829	ENSCCAG00000020612	DDX42	91	79.756	Cebus_capucinus
ENSTRUG00000010711	ddx42	99	81.556	ENSCATG00000030490	DDX42	99	70.064	Cercocebus_atys
ENSTRUG00000010711	ddx42	99	81.333	ENSCLAG00000003497	DDX42	99	70.236	Chinchilla_lanigera
ENSTRUG00000010711	ddx42	99	74.725	ENSCSAG00000003914	DDX42	99	66.631	Chlorocebus_sabaeus
ENSTRUG00000010711	ddx42	99	70.000	ENSCHOG00000006241	DDX42	61	88.462	Choloepus_hoffmanni
ENSTRUG00000010711	ddx42	99	82.000	ENSCPBG00000026682	DDX42	99	69.821	Chrysemys_picta_bellii
ENSTRUG00000010711	ddx42	99	81.556	ENSCANG00000034663	DDX42	94	79.818	Colobus_angolensis_palliatus
ENSTRUG00000010711	ddx42	99	81.292	ENSCGRG00001009775	Ddx42	99	70.494	Cricetulus_griseus_chok1gshd
ENSTRUG00000010711	ddx42	99	81.292	ENSCGRG00000011718	Ddx42	99	70.494	Cricetulus_griseus_crigri
ENSTRUG00000010711	ddx42	99	89.013	ENSCSEG00000021574	ddx42	100	81.469	Cynoglossus_semilaevis
ENSTRUG00000010711	ddx42	99	88.143	ENSCVAG00000011404	ddx42	100	83.056	Cyprinodon_variegatus
ENSTRUG00000010711	ddx42	99	84.292	ENSDARG00000037928	ddx42	100	75.649	Danio_rerio
ENSTRUG00000010711	ddx42	99	81.111	ENSDNOG00000007961	DDX42	99	68.980	Dasypus_novemcinctus
ENSTRUG00000010711	ddx42	99	67.478	ENSDORG00000004199	Ddx42	99	63.996	Dipodomys_ordii
ENSTRUG00000010711	ddx42	76	62.647	FBgn0036104	CG6418	87	56.348	Drosophila_melanogaster
ENSTRUG00000010711	ddx42	99	72.506	ENSEBUG00000001155	ddx42	93	71.392	Eptatretus_burgeri
ENSTRUG00000010711	ddx42	99	81.333	ENSEASG00005013089	DDX42	93	79.576	Equus_asinus_asinus
ENSTRUG00000010711	ddx42	99	81.333	ENSECAG00000022684	DDX42	99	69.639	Equus_caballus
ENSTRUG00000010711	ddx42	88	81.013	ENSEEUG00000009144	DDX42	73	83.762	Erinaceus_europaeus
ENSTRUG00000010711	ddx42	99	85.491	ENSELUG00000020593	ddx42	100	76.432	Esox_lucius
ENSTRUG00000010711	ddx42	99	81.333	ENSFCAG00000003499	DDX42	99	69.713	Felis_catus
ENSTRUG00000010711	ddx42	99	80.000	ENSFALG00000004675	DDX42	72	76.348	Ficedula_albicollis
ENSTRUG00000010711	ddx42	99	81.333	ENSFDAG00000020516	DDX42	99	70.374	Fukomys_damarensis
ENSTRUG00000010711	ddx42	99	87.472	ENSFHEG00000023290	ddx42	100	82.762	Fundulus_heteroclitus
ENSTRUG00000010711	ddx42	99	80.269	ENSGMOG00000004595	ddx42	88	83.262	Gadus_morhua
ENSTRUG00000010711	ddx42	99	79.778	ENSGALG00000000581	DDX42	99	69.013	Gallus_gallus
ENSTRUG00000010711	ddx42	99	89.038	ENSGAFG00000011846	ddx42	97	84.800	Gambusia_affinis
ENSTRUG00000010711	ddx42	99	81.960	ENSGACG00000009782	ddx42	100	79.000	Gasterosteus_aculeatus
ENSTRUG00000010711	ddx42	99	82.000	ENSGAGG00000024411	DDX42	99	69.579	Gopherus_agassizii
ENSTRUG00000010711	ddx42	99	81.556	ENSGGOG00000006779	DDX42	91	79.726	Gorilla_gorilla
ENSTRUG00000010711	ddx42	99	90.380	ENSHBUG00000008705	ddx42	100	83.736	Haplochromis_burtoni
ENSTRUG00000010711	ddx42	99	76.615	ENSHGLG00000010024	DDX42	99	66.810	Heterocephalus_glaber_female
ENSTRUG00000010711	ddx42	99	80.889	ENSHGLG00100004479	-	99	69.501	Heterocephalus_glaber_male
ENSTRUG00000010711	ddx42	95	59.259	ENSHGLG00100007138	-	90	55.324	Heterocephalus_glaber_male
ENSTRUG00000010711	ddx42	99	84.978	ENSHCOG00000003357	ddx42	100	79.455	Hippocampus_comes
ENSTRUG00000010711	ddx42	99	83.151	ENSIPUG00000013327	ddx42	100	76.999	Ictalurus_punctatus
ENSTRUG00000010711	ddx42	99	81.333	ENSSTOG00000008922	DDX42	99	70.000	Ictidomys_tridecemlineatus
ENSTRUG00000010711	ddx42	99	81.333	ENSJJAG00000011727	Ddx42	99	70.779	Jaculus_jaculus
ENSTRUG00000010711	ddx42	99	91.236	ENSKMAG00000009914	ddx42	100	84.048	Kryptolebias_marmoratus
ENSTRUG00000010711	ddx42	99	90.787	ENSLBEG00000004687	ddx42	100	77.531	Labrus_bergylta
ENSTRUG00000010711	ddx42	99	81.375	ENSLACG00000013476	DDX42	97	73.208	Latimeria_chalumnae
ENSTRUG00000010711	ddx42	99	84.821	ENSLOCG00000011764	ddx42	100	76.739	Lepisosteus_oculatus
ENSTRUG00000010711	ddx42	99	81.333	ENSLAFG00000003249	DDX42	100	70.288	Loxodonta_africana
ENSTRUG00000010711	ddx42	99	81.556	ENSMFAG00000031356	DDX42	99	70.172	Macaca_fascicularis
ENSTRUG00000010711	ddx42	99	81.556	ENSMMUG00000016762	DDX42	90	79.726	Macaca_mulatta
ENSTRUG00000010711	ddx42	99	81.556	ENSMNEG00000038250	DDX42	99	70.172	Macaca_nemestrina
ENSTRUG00000010711	ddx42	99	81.556	ENSMLEG00000043080	DDX42	99	69.745	Mandrillus_leucophaeus
ENSTRUG00000010711	ddx42	99	90.807	ENSMAMG00000021888	ddx42	99	82.885	Mastacembelus_armatus
ENSTRUG00000010711	ddx42	99	89.933	ENSMZEG00005023103	ddx42	100	83.846	Maylandia_zebra
ENSTRUG00000010711	ddx42	99	79.778	ENSMGAG00000001822	DDX42	99	69.231	Meleagris_gallopavo
ENSTRUG00000010711	ddx42	72	83.692	ENSMAUG00000020774	-	87	79.726	Mesocricetus_auratus
ENSTRUG00000010711	ddx42	99	81.111	ENSMICG00000009952	DDX42	99	70.117	Microcebus_murinus
ENSTRUG00000010711	ddx42	99	79.431	ENSMOCG00000015504	Ddx42	99	70.334	Microtus_ochrogaster
ENSTRUG00000010711	ddx42	99	87.640	ENSMMOG00000016963	ddx42	87	81.616	Mola_mola
ENSTRUG00000010711	ddx42	99	81.333	ENSMODG00000009917	-	98	84.222	Monodelphis_domestica
ENSTRUG00000010711	ddx42	99	91.031	ENSMALG00000007800	ddx42	100	84.071	Monopterus_albus
ENSTRUG00000010711	ddx42	99	79.431	MGP_CAROLIEiJ_G0017314	Ddx42	99	70.204	Mus_caroli
ENSTRUG00000010711	ddx42	99	79.431	ENSMUSG00000020705	Ddx42	99	70.204	Mus_musculus
ENSTRUG00000010711	ddx42	99	80.667	MGP_PahariEiJ_G0018444	-	95	84.925	Mus_pahari
ENSTRUG00000010711	ddx42	99	79.431	MGP_SPRETEiJ_G0018158	Ddx42	99	70.311	Mus_spretus
ENSTRUG00000010711	ddx42	99	81.333	ENSMPUG00000014921	DDX42	90	74.356	Mustela_putorius_furo
ENSTRUG00000010711	ddx42	99	81.333	ENSMLUG00000011645	DDX42	89	74.239	Myotis_lucifugus
ENSTRUG00000010711	ddx42	99	80.889	ENSNGAG00000021897	Ddx42	99	70.474	Nannospalax_galili
ENSTRUG00000010711	ddx42	99	90.135	ENSNBRG00000004466	ddx42	100	82.269	Neolamprologus_brichardi
ENSTRUG00000010711	ddx42	99	81.556	ENSNLEG00000004248	DDX42	93	79.726	Nomascus_leucogenys
ENSTRUG00000010711	ddx42	72	70.034	ENSMEUG00000013227	-	71	69.521	Notamacropus_eugenii
ENSTRUG00000010711	ddx42	99	81.111	ENSOPRG00000014960	DDX42	99	69.345	Ochotona_princeps
ENSTRUG00000010711	ddx42	96	80.275	ENSODEG00000007810	DDX42	99	66.988	Octodon_degus
ENSTRUG00000010711	ddx42	99	89.933	ENSONIG00000000734	ddx42	100	83.956	Oreochromis_niloticus
ENSTRUG00000010711	ddx42	99	73.274	ENSOANG00000000265	DDX42	100	82.593	Ornithorhynchus_anatinus
ENSTRUG00000010711	ddx42	99	80.889	ENSOCUG00000004304	DDX42	83	73.770	Oryctolagus_cuniculus
ENSTRUG00000010711	ddx42	99	90.359	ENSORLG00000002395	ddx42	99	83.751	Oryzias_latipes
ENSTRUG00000010711	ddx42	99	90.359	ENSORLG00020011621	ddx42	100	84.658	Oryzias_latipes_hni
ENSTRUG00000010711	ddx42	99	90.135	ENSORLG00015004487	ddx42	100	84.547	Oryzias_latipes_hsok
ENSTRUG00000010711	ddx42	99	90.583	ENSOMEG00000020093	ddx42	100	83.680	Oryzias_melastigma
ENSTRUG00000010711	ddx42	99	81.333	ENSOGAG00000006872	DDX42	99	69.703	Otolemur_garnettii
ENSTRUG00000010711	ddx42	99	79.650	ENSOARG00000013540	DDX42	89	74.501	Ovis_aries
ENSTRUG00000010711	ddx42	99	81.556	ENSPPAG00000007496	DDX42	91	79.877	Pan_paniscus
ENSTRUG00000010711	ddx42	99	81.333	ENSPPRG00000002740	DDX42	99	69.713	Panthera_pardus
ENSTRUG00000010711	ddx42	99	81.333	ENSPTIG00000009932	DDX42	99	70.032	Panthera_tigris_altaica
ENSTRUG00000010711	ddx42	99	81.556	ENSPTRG00000009523	DDX42	91	79.877	Pan_troglodytes
ENSTRUG00000010711	ddx42	99	81.556	ENSPANG00000020990	DDX42	99	70.064	Papio_anubis
ENSTRUG00000010711	ddx42	99	86.161	ENSPKIG00000002901	ddx42	100	76.211	Paramormyrops_kingsleyae
ENSTRUG00000010711	ddx42	99	81.333	ENSPSIG00000010289	DDX42	96	78.239	Pelodiscus_sinensis
ENSTRUG00000010711	ddx42	99	86.742	ENSPMGG00000009323	ddx42	100	79.029	Periophthalmus_magnuspinnatus
ENSTRUG00000010711	ddx42	99	80.667	ENSPEMG00000006755	Ddx42	99	70.481	Peromyscus_maniculatus_bairdii
ENSTRUG00000010711	ddx42	99	71.903	ENSPMAG00000005580	ddx42	99	71.337	Petromyzon_marinus
ENSTRUG00000010711	ddx42	99	81.333	ENSPCIG00000009093	DDX42	99	69.556	Phascolarctos_cinereus
ENSTRUG00000010711	ddx42	99	89.709	ENSPFOG00000014104	ddx42	100	82.309	Poecilia_formosa
ENSTRUG00000010711	ddx42	99	89.262	ENSPLAG00000010522	ddx42	100	82.093	Poecilia_latipinna
ENSTRUG00000010711	ddx42	99	89.709	ENSPMEG00000010744	ddx42	100	81.711	Poecilia_mexicana
ENSTRUG00000010711	ddx42	99	88.814	ENSPREG00000009926	ddx42	100	80.806	Poecilia_reticulata
ENSTRUG00000010711	ddx42	99	77.778	ENSPPYG00000008531	DDX42	90	72.248	Pongo_abelii
ENSTRUG00000010711	ddx42	84	74.468	ENSPCAG00000002474	DDX42	100	65.402	Procavia_capensis
ENSTRUG00000010711	ddx42	91	62.234	ENSPCOG00000001559	DDX42	92	72.006	Propithecus_coquereli
ENSTRUG00000010711	ddx42	99	78.444	ENSPVAG00000000160	DDX42	99	68.230	Pteropus_vampyrus
ENSTRUG00000010711	ddx42	65	90.378	ENSPNYG00000013954	ddx42	97	80.729	Pundamilia_nyererei
ENSTRUG00000010711	ddx42	94	84.332	ENSPNAG00000017352	ddx42	100	75.506	Pygocentrus_nattereri
ENSTRUG00000010711	ddx42	99	79.431	ENSRNOG00000009474	Ddx42	99	70.525	Rattus_norvegicus
ENSTRUG00000010711	ddx42	99	81.556	ENSRBIG00000004781	DDX42	94	79.549	Rhinopithecus_bieti
ENSTRUG00000010711	ddx42	99	81.556	ENSRROG00000029794	DDX42	99	70.386	Rhinopithecus_roxellana
ENSTRUG00000010711	ddx42	99	81.556	ENSSBOG00000029624	DDX42	91	79.756	Saimiri_boliviensis_boliviensis
ENSTRUG00000010711	ddx42	99	81.333	ENSSHAG00000012896	-	99	69.556	Sarcophilus_harrisii
ENSTRUG00000010711	ddx42	64	50.075	ENSSHAG00000007919	-	99	49.020	Sarcophilus_harrisii
ENSTRUG00000010711	ddx42	99	85.714	ENSSFOG00015014064	ddx42	82	84.746	Scleropages_formosus
ENSTRUG00000010711	ddx42	99	90.583	ENSSMAG00000009077	ddx42	99	83.082	Scophthalmus_maximus
ENSTRUG00000010711	ddx42	99	90.583	ENSSDUG00000022221	ddx42	100	84.742	Seriola_dumerili
ENSTRUG00000010711	ddx42	99	88.789	ENSSLDG00000018483	ddx42	100	83.518	Seriola_lalandi_dorsalis
ENSTRUG00000010711	ddx42	99	80.444	ENSSARG00000009847	DDX42	99	69.607	Sorex_araneus
ENSTRUG00000010711	ddx42	99	82.000	ENSSPUG00000018806	DDX42	99	70.105	Sphenodon_punctatus
ENSTRUG00000010711	ddx42	99	91.704	ENSSPAG00000013055	ddx42	100	84.523	Stegastes_partitus
ENSTRUG00000010711	ddx42	71	84.013	ENSSSCG00000017289	DDX42	86	74.412	Sus_scrofa
ENSTRUG00000010711	ddx42	99	80.266	ENSTGUG00000001931	DDX42	99	70.043	Taeniopygia_guttata
ENSTRUG00000010711	ddx42	88	93.147	ENSTNIG00000014936	ddx42	100	97.201	Tetraodon_nigroviridis
ENSTRUG00000010711	ddx42	99	80.222	ENSTBEG00000010159	DDX42	98	77.108	Tupaia_belangeri
ENSTRUG00000010711	ddx42	99	81.292	ENSTTRG00000006962	DDX42	99	70.288	Tursiops_truncatus
ENSTRUG00000010711	ddx42	99	81.333	ENSUAMG00000007321	DDX42	100	69.735	Ursus_americanus
ENSTRUG00000010711	ddx42	99	80.444	ENSUMAG00000017438	DDX42	100	69.607	Ursus_maritimus
ENSTRUG00000010711	ddx42	82	89.316	ENSVPAG00000009633	DDX42	94	73.154	Vicugna_pacos
ENSTRUG00000010711	ddx42	99	81.333	ENSVVUG00000006095	DDX42	99	69.936	Vulpes_vulpes
ENSTRUG00000010711	ddx42	99	81.027	ENSXETG00000003245	ddx42	100	70.042	Xenopus_tropicalis
ENSTRUG00000010711	ddx42	66	96.928	ENSXCOG00000017560	ddx42	97	83.837	Xiphophorus_couchianus
ENSTRUG00000010711	ddx42	99	91.461	ENSXMAG00000008138	ddx42	100	85.111	Xiphophorus_maculatus