EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000010856 (Gene tree)
Gene ID: 101062088
Gene Symbol: pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 6313 bases
Position: chr7:5375228-5381540
Accession: 101062088
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000027429	POP1	PF06978.11	8.4e-35	1	2
ENSTRUP00000027429	POP1	PF06978.11	8.4e-35	2	2
ENSTRUP00000027429	POPLD	PF08170.12	1.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000027538	-	2796	XM_003965866	ENSTRUP00000027429	931 (aa)	XP_003965915	H2TRX1

Gene Model

Click here to download ENSTRUG00000010856's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03008	Ribosome biogenesis in eukaryotes	KEGG
tru03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000010856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000010856	pop1	94	48.520	ENSG00000104356	POP1	91	48.520	Homo_sapiens
ENSTRUG00000010856	pop1	100	70.624	ENSAPOG00000008198	pop1	100	70.624	Acanthochromis_polyacanthus
ENSTRUG00000010856	pop1	94	47.319	ENSAMEG00000000556	POP1	91	47.529	Ailuropoda_melanoleuca
ENSTRUG00000010856	pop1	100	68.763	ENSACIG00000004169	POP1	100	68.763	Amphilophus_citrinellus
ENSTRUG00000010856	pop1	100	69.177	ENSAOCG00000010991	pop1	100	69.889	Amphiprion_ocellaris
ENSTRUG00000010856	pop1	100	69.619	ENSAPEG00000007607	pop1	100	69.619	Amphiprion_percula
ENSTRUG00000010856	pop1	100	69.819	ENSATEG00000024814	POP1	100	69.718	Anabas_testudineus
ENSTRUG00000010856	pop1	94	47.752	ENSAPLG00000014418	POP1	98	47.752	Anas_platyrhynchos
ENSTRUG00000010856	pop1	93	48.073	ENSACAG00000016083	POP1	100	45.789	Anolis_carolinensis
ENSTRUG00000010856	pop1	84	54.915	ENSANAG00000026360	POP1	91	54.915	Aotus_nancymaae
ENSTRUG00000010856	pop1	100	65.507	ENSACLG00000010951	pop1	100	65.663	Astatotilapia_calliptera
ENSTRUG00000010856	pop1	100	55.064	ENSAMXG00000014483	POP1	100	55.064	Astyanax_mexicanus
ENSTRUG00000010856	pop1	94	48.353	ENSBTAG00000012596	POP1	91	48.778	Bos_taurus
ENSTRUG00000010856	pop1	94	48.101	ENSCJAG00000015567	POP1	92	48.472	Callithrix_jacchus
ENSTRUG00000010856	pop1	94	48.743	ENSCAFG00000000469	POP1	91	48.743	Canis_familiaris
ENSTRUG00000010856	pop1	94	47.715	ENSCAFG00020026765	POP1	91	47.715	Canis_lupus_dingo
ENSTRUG00000010856	pop1	89	51.869	ENSCHIG00000017066	POP1	91	47.674	Capra_hircus
ENSTRUG00000010856	pop1	94	47.890	ENSTSYG00000003097	POP1	91	48.046	Carlito_syrichta
ENSTRUG00000010856	pop1	92	46.875	ENSCAPG00000007251	POP1	89	47.091	Cavia_aperea
ENSTRUG00000010856	pop1	92	48.587	ENSCPOG00000002901	POP1	89	48.587	Cavia_porcellus
ENSTRUG00000010856	pop1	100	45.996	ENSCCAG00000018939	POP1	100	46.289	Cebus_capucinus
ENSTRUG00000010856	pop1	94	48.203	ENSCATG00000040916	POP1	91	48.203	Cercocebus_atys
ENSTRUG00000010856	pop1	94	47.424	ENSCLAG00000007208	POP1	88	48.097	Chinchilla_lanigera
ENSTRUG00000010856	pop1	92	48.488	ENSCSAG00000012340	POP1	98	48.596	Chlorocebus_sabaeus
ENSTRUG00000010856	pop1	88	52.644	ENSCHOG00000011432	POP1	91	52.644	Choloepus_hoffmanni
ENSTRUG00000010856	pop1	92	50.221	ENSCPBG00000006373	POP1	89	50.221	Chrysemys_picta_bellii
ENSTRUG00000010856	pop1	82	34.956	ENSCING00000008323	-	86	34.956	Ciona_intestinalis
ENSTRUG00000010856	pop1	94	47.840	ENSCANG00000001647	POP1	91	47.840	Colobus_angolensis_palliatus
ENSTRUG00000010856	pop1	92	46.608	ENSCGRG00001017308	Pop1	89	47.420	Cricetulus_griseus_chok1gshd
ENSTRUG00000010856	pop1	92	43.217	ENSCGRG00000010824	Pop1	100	41.809	Cricetulus_griseus_crigri
ENSTRUG00000010856	pop1	100	64.493	ENSCSEG00000008737	POP1	100	64.889	Cynoglossus_semilaevis
ENSTRUG00000010856	pop1	100	65.856	ENSCVAG00000022248	pop1	100	66.531	Cyprinodon_variegatus
ENSTRUG00000010856	pop1	52	51.318	ENSDARG00000102087	pop1	99	51.318	Danio_rerio
ENSTRUG00000010856	pop1	94	45.890	ENSDNOG00000019974	POP1	91	45.890	Dasypus_novemcinctus
ENSTRUG00000010856	pop1	95	43.131	ENSDORG00000015384	Pop1	91	43.237	Dipodomys_ordii
ENSTRUG00000010856	pop1	80	48.109	ENSETEG00000007839	POP1	77	48.109	Echinops_telfairi
ENSTRUG00000010856	pop1	52	43.293	ENSEBUG00000009897	pop1	98	43.293	Eptatretus_burgeri
ENSTRUG00000010856	pop1	94	48.887	ENSEASG00005003189	POP1	90	48.993	Equus_asinus_asinus
ENSTRUG00000010856	pop1	94	48.990	ENSECAG00000024236	POP1	91	49.099	Equus_caballus
ENSTRUG00000010856	pop1	51	76.316	ENSEEUG00000003050	-	54	76.316	Erinaceus_europaeus
ENSTRUG00000010856	pop1	100	60.081	ENSELUG00000003526	pop1	100	60.609	Esox_lucius
ENSTRUG00000010856	pop1	94	47.609	ENSFCAG00000002168	POP1	91	47.665	Felis_catus
ENSTRUG00000010856	pop1	100	43.848	ENSFALG00000005711	POP1	100	43.945	Ficedula_albicollis
ENSTRUG00000010856	pop1	94	47.684	ENSFDAG00000017068	POP1	91	47.992	Fukomys_damarensis
ENSTRUG00000010856	pop1	100	66.531	ENSFHEG00000019518	pop1	100	66.633	Fundulus_heteroclitus
ENSTRUG00000010856	pop1	100	60.575	ENSGMOG00000000659	POP1	100	60.637	Gadus_morhua
ENSTRUG00000010856	pop1	100	66.254	ENSGAFG00000019770	POP1	100	66.770	Gambusia_affinis
ENSTRUG00000010856	pop1	100	61.960	ENSGACG00000003499	pop1	100	62.056	Gasterosteus_aculeatus
ENSTRUG00000010856	pop1	92	49.724	ENSGAGG00000011737	POP1	87	49.724	Gopherus_agassizii
ENSTRUG00000010856	pop1	94	48.207	ENSGGOG00000003176	POP1	91	48.529	Gorilla_gorilla
ENSTRUG00000010856	pop1	100	65.905	ENSHBUG00000021583	pop1	100	66.165	Haplochromis_burtoni
ENSTRUG00000010856	pop1	92	48.172	ENSHGLG00000006029	POP1	89	48.815	Heterocephalus_glaber_female
ENSTRUG00000010856	pop1	92	48.172	ENSHGLG00100016879	POP1	89	48.815	Heterocephalus_glaber_male
ENSTRUG00000010856	pop1	100	65.182	ENSHCOG00000013888	pop1	100	65.182	Hippocampus_comes
ENSTRUG00000010856	pop1	100	53.477	ENSIPUG00000018336	pop1	100	53.477	Ictalurus_punctatus
ENSTRUG00000010856	pop1	94	47.182	ENSSTOG00000011455	POP1	88	47.182	Ictidomys_tridecemlineatus
ENSTRUG00000010856	pop1	94	46.950	ENSJJAG00000013325	Pop1	91	47.123	Jaculus_jaculus
ENSTRUG00000010856	pop1	100	68.053	ENSKMAG00000001346	POP1	100	68.667	Kryptolebias_marmoratus
ENSTRUG00000010856	pop1	100	67.119	ENSLBEG00000024457	POP1	100	67.432	Labrus_bergylta
ENSTRUG00000010856	pop1	92	51.133	ENSLACG00000012498	POP1	95	51.620	Latimeria_chalumnae
ENSTRUG00000010856	pop1	95	56.564	ENSLOCG00000009817	POP1	92	56.564	Lepisosteus_oculatus
ENSTRUG00000010856	pop1	94	48.101	ENSLAFG00000010770	POP1	91	48.887	Loxodonta_africana
ENSTRUG00000010856	pop1	94	47.945	ENSMFAG00000000347	POP1	91	47.945	Macaca_fascicularis
ENSTRUG00000010856	pop1	94	47.945	ENSMNEG00000036870	POP1	91	47.945	Macaca_nemestrina
ENSTRUG00000010856	pop1	94	48.203	ENSMLEG00000034986	POP1	91	48.203	Mandrillus_leucophaeus
ENSTRUG00000010856	pop1	100	69.728	ENSMAMG00000004040	pop1	100	69.138	Mastacembelus_armatus
ENSTRUG00000010856	pop1	100	65.771	ENSMZEG00005025448	pop1	100	65.863	Maylandia_zebra
ENSTRUG00000010856	pop1	100	44.327	ENSMGAG00000012167	POP1	100	44.370	Meleagris_gallopavo
ENSTRUG00000010856	pop1	92	47.530	ENSMAUG00000017537	Pop1	89	47.530	Mesocricetus_auratus
ENSTRUG00000010856	pop1	94	47.513	ENSMICG00000004361	POP1	91	47.513	Microcebus_murinus
ENSTRUG00000010856	pop1	94	46.617	ENSMOCG00000006356	Pop1	91	47.396	Microtus_ochrogaster
ENSTRUG00000010856	pop1	100	67.925	ENSMMOG00000018242	pop1	100	68.803	Mola_mola
ENSTRUG00000010856	pop1	92	47.676	ENSMODG00000006561	POP1	89	47.676	Monodelphis_domestica
ENSTRUG00000010856	pop1	100	67.778	ENSMALG00000012621	POP1	100	67.846	Monopterus_albus
ENSTRUG00000010856	pop1	94	46.504	MGP_CAROLIEiJ_G0019726	Pop1	91	46.709	Mus_caroli
ENSTRUG00000010856	pop1	94	45.754	ENSMUSG00000022325	Pop1	91	46.178	Mus_musculus
ENSTRUG00000010856	pop1	92	46.046	MGP_PahariEiJ_G0019735	Pop1	89	46.841	Mus_pahari
ENSTRUG00000010856	pop1	94	46.391	MGP_SPRETEiJ_G0020622	Pop1	91	46.596	Mus_spretus
ENSTRUG00000010856	pop1	92	48.593	ENSMPUG00000015250	POP1	89	48.593	Mustela_putorius_furo
ENSTRUG00000010856	pop1	94	46.779	ENSMLUG00000010204	POP1	91	46.716	Myotis_lucifugus
ENSTRUG00000010856	pop1	94	47.240	ENSNGAG00000001582	Pop1	91	47.558	Nannospalax_galili
ENSTRUG00000010856	pop1	100	66.597	ENSNBRG00000002356	pop1	100	66.597	Neolamprologus_brichardi
ENSTRUG00000010856	pop1	92	48.925	ENSNLEG00000002541	POP1	89	48.925	Nomascus_leucogenys
ENSTRUG00000010856	pop1	81	57.516	ENSMEUG00000003118	POP1	78	57.516	Notamacropus_eugenii
ENSTRUG00000010856	pop1	94	48.176	ENSOPRG00000007667	POP1	91	48.176	Ochotona_princeps
ENSTRUG00000010856	pop1	92	47.629	ENSODEG00000003984	POP1	95	46.653	Octodon_degus
ENSTRUG00000010856	pop1	100	66.700	ENSONIG00000016445	pop1	100	67.169	Oreochromis_niloticus
ENSTRUG00000010856	pop1	53	64.000	ENSOANG00000001278	-	85	44.922	Ornithorhynchus_anatinus
ENSTRUG00000010856	pop1	94	47.789	ENSOCUG00000017400	POP1	91	48.164	Oryctolagus_cuniculus
ENSTRUG00000010856	pop1	100	67.839	ENSORLG00000002839	pop1	100	68.079	Oryzias_latipes
ENSTRUG00000010856	pop1	100	66.598	ENSORLG00020022450	POP1	100	66.701	Oryzias_latipes_hni
ENSTRUG00000010856	pop1	100	67.695	ENSORLG00015012746	POP1	100	68.004	Oryzias_latipes_hsok
ENSTRUG00000010856	pop1	100	66.289	ENSOMEG00000006915	pop1	99	66.289	Oryzias_melastigma
ENSTRUG00000010856	pop1	94	46.800	ENSOGAG00000001466	POP1	91	47.634	Otolemur_garnettii
ENSTRUG00000010856	pop1	94	48.414	ENSPPAG00000018410	POP1	91	48.414	Pan_paniscus
ENSTRUG00000010856	pop1	94	47.184	ENSPPRG00000005002	POP1	91	47.240	Panthera_pardus
ENSTRUG00000010856	pop1	94	47.078	ENSPTIG00000016527	POP1	91	47.134	Panthera_tigris_altaica
ENSTRUG00000010856	pop1	94	48.520	ENSPTRG00000020458	POP1	91	48.520	Pan_troglodytes
ENSTRUG00000010856	pop1	94	48.414	ENSPANG00000009704	POP1	91	48.414	Papio_anubis
ENSTRUG00000010856	pop1	100	56.738	ENSPKIG00000016325	POP1	100	57.389	Paramormyrops_kingsleyae
ENSTRUG00000010856	pop1	92	48.575	ENSPSIG00000012343	POP1	89	47.854	Pelodiscus_sinensis
ENSTRUG00000010856	pop1	100	62.334	ENSPMGG00000022253	POP1	100	62.334	Periophthalmus_magnuspinnatus
ENSTRUG00000010856	pop1	92	47.318	ENSPEMG00000023633	Pop1	89	47.380	Peromyscus_maniculatus_bairdii
ENSTRUG00000010856	pop1	92	42.887	ENSPMAG00000003209	POP1	99	43.098	Petromyzon_marinus
ENSTRUG00000010856	pop1	93	50.148	ENSPCIG00000012216	POP1	94	46.020	Phascolarctos_cinereus
ENSTRUG00000010856	pop1	100	66.154	ENSPFOG00000012490	POP1	100	66.154	Poecilia_formosa
ENSTRUG00000010856	pop1	100	66.117	ENSPLAG00000004646	POP1	100	66.117	Poecilia_latipinna
ENSTRUG00000010856	pop1	100	65.779	ENSPMEG00000019592	POP1	100	65.779	Poecilia_mexicana
ENSTRUG00000010856	pop1	100	66.258	ENSPREG00000020951	POP1	100	66.258	Poecilia_reticulata
ENSTRUG00000010856	pop1	94	48.520	ENSPPYG00000018777	POP1	91	48.520	Pongo_abelii
ENSTRUG00000010856	pop1	94	45.303	ENSPCAG00000016662	POP1	91	45.303	Procavia_capensis
ENSTRUG00000010856	pop1	94	47.413	ENSPCOG00000019420	POP1	91	47.413	Propithecus_coquereli
ENSTRUG00000010856	pop1	92	48.478	ENSPVAG00000014468	POP1	89	48.587	Pteropus_vampyrus
ENSTRUG00000010856	pop1	100	66.805	ENSPNYG00000004476	pop1	100	67.118	Pundamilia_nyererei
ENSTRUG00000010856	pop1	100	52.884	ENSPNAG00000000265	pop1	100	52.884	Pygocentrus_nattereri
ENSTRUG00000010856	pop1	94	45.983	ENSRNOG00000005243	Pop1	91	46.652	Rattus_norvegicus
ENSTRUG00000010856	pop1	94	48.520	ENSRBIG00000007996	POP1	91	48.520	Rhinopithecus_bieti
ENSTRUG00000010856	pop1	94	48.626	ENSRROG00000012334	POP1	91	48.626	Rhinopithecus_roxellana
ENSTRUG00000010856	pop1	94	47.734	ENSSBOG00000020830	POP1	92	48.051	Saimiri_boliviensis_boliviensis
ENSTRUG00000010856	pop1	92	48.000	ENSSHAG00000000296	POP1	89	48.000	Sarcophilus_harrisii
ENSTRUG00000010856	pop1	100	58.720	ENSSFOG00015007429	pop1	99	58.720	Scleropages_formosus
ENSTRUG00000010856	pop1	100	69.716	ENSSMAG00000010467	POP1	100	70.042	Scophthalmus_maximus
ENSTRUG00000010856	pop1	100	68.305	ENSSDUG00000007817	POP1	100	68.907	Seriola_dumerili
ENSTRUG00000010856	pop1	100	68.373	ENSSLDG00000012565	POP1	100	69.076	Seriola_lalandi_dorsalis
ENSTRUG00000010856	pop1	92	46.848	ENSSPUG00000003550	-	89	46.739	Sphenodon_punctatus
ENSTRUG00000010856	pop1	100	71.503	ENSSPAG00000014955	pop1	100	71.608	Stegastes_partitus
ENSTRUG00000010856	pop1	94	48.721	ENSSSCG00000006078	POP1	91	48.721	Sus_scrofa
ENSTRUG00000010856	pop1	94	42.736	ENSTGUG00000012011	-	98	42.948	Taeniopygia_guttata
ENSTRUG00000010856	pop1	92	78.337	ENSTNIG00000013297	pop1	95	78.337	Tetraodon_nigroviridis
ENSTRUG00000010856	pop1	92	47.027	ENSTBEG00000014214	POP1	93	47.300	Tupaia_belangeri
ENSTRUG00000010856	pop1	94	46.440	ENSTTRG00000016071	POP1	91	46.652	Tursiops_truncatus
ENSTRUG00000010856	pop1	95	47.170	ENSUAMG00000017309	POP1	95	47.379	Ursus_americanus
ENSTRUG00000010856	pop1	86	59.524	ENSUMAG00000016952	POP1	90	59.524	Ursus_maritimus
ENSTRUG00000010856	pop1	80	60.109	ENSVPAG00000008278	POP1	73	60.109	Vicugna_pacos
ENSTRUG00000010856	pop1	94	47.302	ENSVVUG00000010994	POP1	91	47.302	Vulpes_vulpes
ENSTRUG00000010856	pop1	100	59.797	ENSXCOG00000017043	POP1	100	60.305	Xiphophorus_couchianus
ENSTRUG00000010856	pop1	100	65.776	ENSXMAG00000002472	POP1	100	66.290	Xiphophorus_maculatus