EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000011066 (Gene tree)
Gene ID: 101070879
Gene Symbol: -
Alias: -
Full Name: helicase ARIP4-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 41481 bases
Position: chr3:3427317-3468797
Accession: 101070879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000027932	ResIII	PF04851.15	1.8e-08	1	1
ENSTRUP00000057219	ResIII	PF04851.15	1.9e-08	1	1
ENSTRUP00000049136	ResIII	PF04851.15	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000053557	-	8554	XM_011621812	ENSTRUP00000057219	1448 (aa)	XP_011620114	UPI0005D13B87
ENSTRUT00000028042	-	8253	XM_011621808	ENSTRUP00000027932	1438 (aa)	XP_011620110	H2TTC4
ENSTRUT00000056063	-	8567	XM_003963038	ENSTRUP00000049136	1462 (aa)	XP_003963087	UPI0002989660

Gene Model

Click here to download ENSTRUG00000011066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000011066's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000011066	-	95	59.431	ENSTRUG00000013962	rad54l2	94	58.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000011066	-	92	58.558	ENSG00000164080	RAD54L2	89	62.522	Homo_sapiens
ENSTRUG00000011066	-	100	76.403	ENSAPOG00000024141	-	100	76.698	Acanthochromis_polyacanthus
ENSTRUG00000011066	-	92	58.648	ENSAMEG00000009326	RAD54L2	84	61.821	Ailuropoda_melanoleuca
ENSTRUG00000011066	-	94	74.311	ENSACIG00000015932	-	100	74.238	Amphilophus_citrinellus
ENSTRUG00000011066	-	87	62.029	ENSACIG00000018079	rad54l2	91	61.562	Amphilophus_citrinellus
ENSTRUG00000011066	-	100	76.840	ENSAOCG00000022380	-	100	76.653	Amphiprion_ocellaris
ENSTRUG00000011066	-	92	62.373	ENSATEG00000009346	rad54l2	95	59.955	Anabas_testudineus
ENSTRUG00000011066	-	100	77.428	ENSATEG00000006641	-	100	78.165	Anabas_testudineus
ENSTRUG00000011066	-	95	60.355	ENSAPLG00000002121	RAD54L2	92	62.211	Anas_platyrhynchos
ENSTRUG00000011066	-	80	65.581	ENSACAG00000015883	RAD54L2	95	62.141	Anolis_carolinensis
ENSTRUG00000011066	-	92	58.194	ENSANAG00000025396	RAD54L2	84	61.409	Aotus_nancymaae
ENSTRUG00000011066	-	100	75.301	ENSACLG00000018296	-	100	75.636	Astatotilapia_calliptera
ENSTRUG00000011066	-	94	59.142	ENSACLG00000019111	rad54l2	95	58.093	Astatotilapia_calliptera
ENSTRUG00000011066	-	95	60.115	ENSAMXG00000013807	rad54l2	97	58.860	Astyanax_mexicanus
ENSTRUG00000011066	-	84	61.760	ENSBTAG00000032253	RAD54L2	85	61.661	Bos_taurus
ENSTRUG00000011066	-	50	47.962	WBGene00007761	rad-26	70	47.962	Caenorhabditis_elegans
ENSTRUG00000011066	-	92	58.267	ENSCJAG00000005575	RAD54L2	87	62.072	Callithrix_jacchus
ENSTRUG00000011066	-	91	58.971	ENSCAFG00000010120	RAD54L2	84	61.821	Canis_familiaris
ENSTRUG00000011066	-	91	58.971	ENSCAFG00020022320	RAD54L2	84	61.821	Canis_lupus_dingo
ENSTRUG00000011066	-	84	61.809	ENSCHIG00000008830	RAD54L2	84	61.711	Capra_hircus
ENSTRUG00000011066	-	92	58.443	ENSTSYG00000013200	RAD54L2	84	61.680	Carlito_syrichta
ENSTRUG00000011066	-	81	60.229	ENSCAPG00000016465	RAD54L2	76	65.022	Cavia_aperea
ENSTRUG00000011066	-	92	58.558	ENSCPOG00000005941	RAD54L2	89	59.162	Cavia_porcellus
ENSTRUG00000011066	-	83	56.386	ENSCCAG00000024465	RAD54L2	88	58.048	Cebus_capucinus
ENSTRUG00000011066	-	92	58.430	ENSCATG00000039891	RAD54L2	85	61.661	Cercocebus_atys
ENSTRUG00000011066	-	92	58.503	ENSCLAG00000008059	RAD54L2	84	61.741	Chinchilla_lanigera
ENSTRUG00000011066	-	92	58.358	ENSCSAG00000014027	RAD54L2	84	61.581	Chlorocebus_sabaeus
ENSTRUG00000011066	-	96	59.931	ENSCPBG00000016624	RAD54L2	96	59.917	Chrysemys_picta_bellii
ENSTRUG00000011066	-	70	50.576	ENSCING00000009208	-	87	53.038	Ciona_intestinalis
ENSTRUG00000011066	-	92	58.285	ENSCANG00000036093	RAD54L2	85	61.502	Colobus_angolensis_palliatus
ENSTRUG00000011066	-	84	61.058	ENSCGRG00000007921	Rad54l2	84	61.138	Cricetulus_griseus_crigri
ENSTRUG00000011066	-	87	75.469	ENSCSEG00000006115	-	98	75.272	Cynoglossus_semilaevis
ENSTRUG00000011066	-	97	57.182	ENSCSEG00000001740	rad54l2	95	57.084	Cynoglossus_semilaevis
ENSTRUG00000011066	-	95	61.131	ENSCVAG00000017887	rad54l2	94	59.708	Cyprinodon_variegatus
ENSTRUG00000011066	-	99	73.320	ENSCVAG00000005376	-	100	72.660	Cyprinodon_variegatus
ENSTRUG00000011066	-	92	62.297	ENSDARG00000063031	rad54l2	97	60.934	Danio_rerio
ENSTRUG00000011066	-	93	57.273	ENSDNOG00000017359	RAD54L2	89	60.015	Dasypus_novemcinctus
ENSTRUG00000011066	-	76	68.256	ENSDORG00000000651	Rad54l2	83	67.033	Dipodomys_ordii
ENSTRUG00000011066	-	58	59.762	FBgn0034976	CG4049	56	54.545	Drosophila_melanogaster
ENSTRUG00000011066	-	89	58.561	ENSETEG00000013290	RAD54L2	90	61.129	Echinops_telfairi
ENSTRUG00000011066	-	71	57.276	ENSEBUG00000001591	rad54l2	74	60.415	Eptatretus_burgeri
ENSTRUG00000011066	-	94	57.599	ENSEASG00005012868	RAD54L2	84	61.581	Equus_asinus_asinus
ENSTRUG00000011066	-	94	57.599	ENSECAG00000014759	RAD54L2	84	61.581	Equus_caballus
ENSTRUG00000011066	-	79	66.219	ENSEEUG00000001759	RAD54L2	76	66.219	Erinaceus_europaeus
ENSTRUG00000011066	-	97	67.518	ENSELUG00000011246	RAD54L2	100	65.849	Esox_lucius
ENSTRUG00000011066	-	92	58.576	ENSFCAG00000018563	RAD54L2	84	61.741	Felis_catus
ENSTRUG00000011066	-	82	66.117	ENSFALG00000008938	RAD54L2	97	63.034	Ficedula_albicollis
ENSTRUG00000011066	-	92	58.267	ENSFDAG00000017084	RAD54L2	84	61.489	Fukomys_damarensis
ENSTRUG00000011066	-	95	60.326	ENSFHEG00000023241	rad54l2	93	58.939	Fundulus_heteroclitus
ENSTRUG00000011066	-	99	74.691	ENSFHEG00000017845	-	99	74.187	Fundulus_heteroclitus
ENSTRUG00000011066	-	91	62.253	ENSGMOG00000010674	rad54l2	98	61.314	Gadus_morhua
ENSTRUG00000011066	-	95	60.506	ENSGALG00000003243	RAD54L2	95	60.041	Gallus_gallus
ENSTRUG00000011066	-	95	60.342	ENSGAFG00000021535	rad54l2	97	57.769	Gambusia_affinis
ENSTRUG00000011066	-	98	73.310	ENSGAFG00000002396	-	99	73.584	Gambusia_affinis
ENSTRUG00000011066	-	95	59.770	ENSGACG00000001558	rad54l2	96	60.519	Gasterosteus_aculeatus
ENSTRUG00000011066	-	88	77.252	ENSGACG00000005642	-	100	77.252	Gasterosteus_aculeatus
ENSTRUG00000011066	-	89	62.239	ENSGAGG00000020971	RAD54L2	92	62.103	Gopherus_agassizii
ENSTRUG00000011066	-	92	58.558	ENSGGOG00000010032	RAD54L2	85	61.809	Gorilla_gorilla
ENSTRUG00000011066	-	100	75.337	ENSHBUG00000018930	-	100	75.741	Haplochromis_burtoni
ENSTRUG00000011066	-	94	59.324	ENSHBUG00000012480	rad54l2	95	58.333	Haplochromis_burtoni
ENSTRUG00000011066	-	92	58.558	ENSHGLG00000012116	RAD54L2	84	61.809	Heterocephalus_glaber_female
ENSTRUG00000011066	-	92	58.558	ENSHGLG00100007205	RAD54L2	84	61.809	Heterocephalus_glaber_male
ENSTRUG00000011066	-	98	57.502	ENSHCOG00000007601	rad54l2	93	57.840	Hippocampus_comes
ENSTRUG00000011066	-	99	71.177	ENSHCOG00000006741	-	100	70.771	Hippocampus_comes
ENSTRUG00000011066	-	95	58.621	ENSIPUG00000024973	-	95	59.317	Ictalurus_punctatus
ENSTRUG00000011066	-	89	60.846	ENSIPUG00000019664	rad54l2	94	58.168	Ictalurus_punctatus
ENSTRUG00000011066	-	86	60.402	ENSSTOG00000010014	RAD54L2	89	59.047	Ictidomys_tridecemlineatus
ENSTRUG00000011066	-	92	58.121	ENSJJAG00000014332	Rad54l2	84	61.329	Jaculus_jaculus
ENSTRUG00000011066	-	99	57.779	ENSKMAG00000001976	rad54l2	96	59.538	Kryptolebias_marmoratus
ENSTRUG00000011066	-	99	75.241	ENSKMAG00000002931	-	99	74.577	Kryptolebias_marmoratus
ENSTRUG00000011066	-	87	76.599	ENSLBEG00000008534	-	100	76.443	Labrus_bergylta
ENSTRUG00000011066	-	95	58.976	ENSLBEG00000018779	rad54l2	94	59.895	Labrus_bergylta
ENSTRUG00000011066	-	92	56.547	ENSLACG00000016004	RAD54L2	97	55.007	Latimeria_chalumnae
ENSTRUG00000011066	-	73	71.966	ENSLOCG00000014222	rad54l2	99	72.060	Lepisosteus_oculatus
ENSTRUG00000011066	-	92	58.849	ENSLAFG00000005966	RAD54L2	84	61.920	Loxodonta_africana
ENSTRUG00000011066	-	92	58.358	ENSMFAG00000041836	RAD54L2	85	61.581	Macaca_fascicularis
ENSTRUG00000011066	-	92	58.358	ENSMMUG00000012002	RAD54L2	84	61.581	Macaca_mulatta
ENSTRUG00000011066	-	92	58.358	ENSMNEG00000035063	RAD54L2	86	61.581	Macaca_nemestrina
ENSTRUG00000011066	-	92	58.358	ENSMLEG00000034668	RAD54L2	85	61.581	Mandrillus_leucophaeus
ENSTRUG00000011066	-	100	76.184	ENSMAMG00000015321	-	100	76.203	Mastacembelus_armatus
ENSTRUG00000011066	-	90	68.407	ENSMAMG00000023761	rad54l2	90	68.587	Mastacembelus_armatus
ENSTRUG00000011066	-	93	59.860	ENSMZEG00005012584	rad54l2	95	59.270	Maylandia_zebra
ENSTRUG00000011066	-	100	75.234	ENSMZEG00005021308	-	100	75.569	Maylandia_zebra
ENSTRUG00000011066	-	95	60.589	ENSMGAG00000002911	RAD54L2	90	62.325	Meleagris_gallopavo
ENSTRUG00000011066	-	72	66.382	ENSMAUG00000011651	Rad54l2	98	64.312	Mesocricetus_auratus
ENSTRUG00000011066	-	88	60.168	ENSMICG00000002777	RAD54L2	89	59.088	Microcebus_murinus
ENSTRUG00000011066	-	92	58.236	ENSMOCG00000022448	Rad54l2	85	61.458	Microtus_ochrogaster
ENSTRUG00000011066	-	88	62.104	ENSMMOG00000021709	rad54l2	92	61.023	Mola_mola
ENSTRUG00000011066	-	94	78.779	ENSMMOG00000016901	-	99	78.779	Mola_mola
ENSTRUG00000011066	-	90	61.300	ENSMODG00000011850	RAD54L2	95	61.300	Monodelphis_domestica
ENSTRUG00000011066	-	88	74.730	ENSMALG00000015084	-	97	81.491	Monopterus_albus
ENSTRUG00000011066	-	94	57.275	MGP_CAROLIEiJ_G0032634	Rad54l2	84	61.058	Mus_caroli
ENSTRUG00000011066	-	94	56.991	ENSMUSG00000040661	Rad54l2	84	61.058	Mus_musculus
ENSTRUG00000011066	-	94	57.376	MGP_PahariEiJ_G0015502	Rad54l2	84	61.169	Mus_pahari
ENSTRUG00000011066	-	94	57.275	MGP_SPRETEiJ_G0033779	Rad54l2	84	61.058	Mus_spretus
ENSTRUG00000011066	-	95	57.768	ENSMPUG00000011865	RAD54L2	86	60.573	Mustela_putorius_furo
ENSTRUG00000011066	-	84	61.532	ENSMLUG00000004605	RAD54L2	84	61.422	Myotis_lucifugus
ENSTRUG00000011066	-	90	58.558	ENSNGAG00000015629	Rad54l2	84	61.809	Nannospalax_galili
ENSTRUG00000011066	-	100	75.674	ENSNBRG00000022847	-	100	76.011	Neolamprologus_brichardi
ENSTRUG00000011066	-	84	63.571	ENSNBRG00000001937	rad54l2	87	63.672	Neolamprologus_brichardi
ENSTRUG00000011066	-	96	56.895	ENSNLEG00000007038	RAD54L2	85	61.809	Nomascus_leucogenys
ENSTRUG00000011066	-	90	71.614	ENSMEUG00000009835	RAD54L2	91	71.614	Notamacropus_eugenii
ENSTRUG00000011066	-	92	58.576	ENSODEG00000018266	RAD54L2	84	61.821	Octodon_degus
ENSTRUG00000011066	-	93	61.260	ENSONIG00000014468	rad54l2	95	59.293	Oreochromis_niloticus
ENSTRUG00000011066	-	96	76.207	ENSONIG00000001663	-	100	74.678	Oreochromis_niloticus
ENSTRUG00000011066	-	95	59.930	ENSOANG00000012793	RAD54L2	92	61.302	Ornithorhynchus_anatinus
ENSTRUG00000011066	-	84	61.680	ENSOCUG00000017577	RAD54L2	84	61.680	Oryctolagus_cuniculus
ENSTRUG00000011066	-	99	70.707	ENSORLG00000002714	-	99	70.937	Oryzias_latipes
ENSTRUG00000011066	-	88	71.113	ENSORLG00000002276	rad54l2	99	57.594	Oryzias_latipes
ENSTRUG00000011066	-	99	70.418	ENSORLG00020019256	-	99	70.648	Oryzias_latipes_hni
ENSTRUG00000011066	-	97	59.491	ENSORLG00020003470	rad54l2	98	58.653	Oryzias_latipes_hni
ENSTRUG00000011066	-	98	70.941	ENSORLG00015013408	-	99	70.822	Oryzias_latipes_hsok
ENSTRUG00000011066	-	97	59.724	ENSORLG00015021530	rad54l2	99	57.905	Oryzias_latipes_hsok
ENSTRUG00000011066	-	97	59.700	ENSOMEG00000005597	rad54l2	98	57.227	Oryzias_melastigma
ENSTRUG00000011066	-	99	71.585	ENSOMEG00000008216	-	99	71.487	Oryzias_melastigma
ENSTRUG00000011066	-	77	59.427	ENSOGAG00000012442	RAD54L2	88	63.531	Otolemur_garnettii
ENSTRUG00000011066	-	84	61.890	ENSOARG00000007264	RAD54L2	84	61.791	Ovis_aries
ENSTRUG00000011066	-	92	58.558	ENSPPAG00000038472	RAD54L2	85	61.809	Pan_paniscus
ENSTRUG00000011066	-	92	58.576	ENSPPRG00000010212	RAD54L2	84	61.741	Panthera_pardus
ENSTRUG00000011066	-	92	58.576	ENSPTIG00000002240	RAD54L2	84	61.741	Panthera_tigris_altaica
ENSTRUG00000011066	-	92	58.558	ENSPTRG00000014974	RAD54L2	85	61.809	Pan_troglodytes
ENSTRUG00000011066	-	92	58.358	ENSPANG00000000857	RAD54L2	85	61.581	Papio_anubis
ENSTRUG00000011066	-	96	65.927	ENSPKIG00000001065	rad54l2	97	65.352	Paramormyrops_kingsleyae
ENSTRUG00000011066	-	70	68.762	ENSPSIG00000014346	RAD54L2	98	66.096	Pelodiscus_sinensis
ENSTRUG00000011066	-	80	63.682	ENSPMGG00000002208	rad54l2	96	62.664	Periophthalmus_magnuspinnatus
ENSTRUG00000011066	-	95	68.421	ENSPMGG00000000641	-	99	67.086	Periophthalmus_magnuspinnatus
ENSTRUG00000011066	-	84	61.741	ENSPEMG00000012051	Rad54l2	84	61.741	Peromyscus_maniculatus_bairdii
ENSTRUG00000011066	-	92	58.700	ENSPCIG00000018143	RAD54L2	94	60.917	Phascolarctos_cinereus
ENSTRUG00000011066	-	95	60.085	ENSPFOG00000018644	rad54l2	93	59.167	Poecilia_formosa
ENSTRUG00000011066	-	100	74.022	ENSPFOG00000000197	-	100	73.482	Poecilia_formosa
ENSTRUG00000011066	-	100	74.029	ENSPLAG00000013908	-	100	73.892	Poecilia_latipinna
ENSTRUG00000011066	-	95	60.500	ENSPLAG00000006015	rad54l2	94	58.998	Poecilia_latipinna
ENSTRUG00000011066	-	100	73.845	ENSPMEG00000009878	-	100	73.302	Poecilia_mexicana
ENSTRUG00000011066	-	95	60.226	ENSPMEG00000021535	rad54l2	93	59.306	Poecilia_mexicana
ENSTRUG00000011066	-	98	74.051	ENSPREG00000013377	RAD54L2	99	73.361	Poecilia_reticulata
ENSTRUG00000011066	-	94	60.433	ENSPREG00000008628	rad54l2	100	59.813	Poecilia_reticulata
ENSTRUG00000011066	-	92	58.558	ENSPPYG00000013831	RAD54L2	87	61.809	Pongo_abelii
ENSTRUG00000011066	-	74	59.766	ENSPCAG00000011952	RAD54L2	79	59.766	Procavia_capensis
ENSTRUG00000011066	-	87	60.418	ENSPCOG00000015983	RAD54L2	84	61.569	Propithecus_coquereli
ENSTRUG00000011066	-	100	75.539	ENSPNYG00000011435	-	100	75.876	Pundamilia_nyererei
ENSTRUG00000011066	-	84	64.513	ENSPNYG00000020693	rad54l2	88	64.759	Pundamilia_nyererei
ENSTRUG00000011066	-	95	60.287	ENSPNAG00000006451	rad54l2	96	59.774	Pygocentrus_nattereri
ENSTRUG00000011066	-	99	62.432	ENSPNAG00000011583	-	97	63.771	Pygocentrus_nattereri
ENSTRUG00000011066	-	94	54.468	ENSRNOG00000013570	Rad54l2	84	57.966	Rattus_norvegicus
ENSTRUG00000011066	-	70	65.015	ENSRNOG00000049489	LOC102552166	91	66.633	Rattus_norvegicus
ENSTRUG00000011066	-	92	58.212	ENSRBIG00000032434	RAD54L2	89	63.083	Rhinopithecus_bieti
ENSTRUG00000011066	-	96	56.639	ENSRROG00000042309	RAD54L2	85	61.502	Rhinopithecus_roxellana
ENSTRUG00000011066	-	95	57.556	ENSSBOG00000002139	RAD54L2	89	59.088	Saimiri_boliviensis_boliviensis
ENSTRUG00000011066	-	95	59.403	ENSSHAG00000008604	RAD54L2	92	60.759	Sarcophilus_harrisii
ENSTRUG00000011066	-	96	66.808	ENSSFOG00015019014	rad54l2	97	66.737	Scleropages_formosus
ENSTRUG00000011066	-	89	60.548	ENSSMAG00000020933	rad54l2	93	58.103	Scophthalmus_maximus
ENSTRUG00000011066	-	99	75.458	ENSSMAG00000009978	-	99	75.237	Scophthalmus_maximus
ENSTRUG00000011066	-	98	58.483	ENSSDUG00000014268	rad54l2	95	60.287	Seriola_dumerili
ENSTRUG00000011066	-	100	77.001	ENSSDUG00000016711	-	100	76.933	Seriola_dumerili
ENSTRUG00000011066	-	97	76.392	ENSSLDG00000023388	-	99	75.969	Seriola_lalandi_dorsalis
ENSTRUG00000011066	-	95	60.140	ENSSLDG00000023959	rad54l2	97	61.448	Seriola_lalandi_dorsalis
ENSTRUG00000011066	-	98	58.389	ENSSPAG00000016532	rad54l2	95	59.536	Stegastes_partitus
ENSTRUG00000011066	-	93	77.074	ENSSPAG00000006371	-	100	76.538	Stegastes_partitus
ENSTRUG00000011066	-	92	58.309	ENSSSCG00000011425	RAD54L2	84	61.581	Sus_scrofa
ENSTRUG00000011066	-	95	60.506	ENSTGUG00000004888	RAD54L2	90	62.676	Taeniopygia_guttata
ENSTRUG00000011066	-	75	68.556	ENSTNIG00000014694	rad54l2	99	66.090	Tetraodon_nigroviridis
ENSTRUG00000011066	-	76	83.710	ENSTNIG00000006049	-	100	83.801	Tetraodon_nigroviridis
ENSTRUG00000011066	-	87	57.321	ENSTBEG00000003377	RAD54L2	88	60.690	Tupaia_belangeri
ENSTRUG00000011066	-	92	59.202	ENSUAMG00000020891	RAD54L2	87	62.368	Ursus_americanus
ENSTRUG00000011066	-	92	58.515	ENSUMAG00000021678	RAD54L2	79	67.812	Ursus_maritimus
ENSTRUG00000011066	-	91	58.971	ENSVVUG00000026874	RAD54L2	87	61.821	Vulpes_vulpes
ENSTRUG00000011066	-	92	59.662	ENSXETG00000000070	rad54l2	92	59.467	Xenopus_tropicalis
ENSTRUG00000011066	-	97	70.972	ENSXCOG00000002848	-	99	70.830	Xiphophorus_couchianus
ENSTRUG00000011066	-	95	57.739	ENSXCOG00000004961	rad54l2	90	59.353	Xiphophorus_couchianus
ENSTRUG00000011066	-	100	73.531	ENSXMAG00000019370	-	100	73.801	Xiphophorus_maculatus
ENSTRUG00000011066	-	95	60.400	ENSXMAG00000017182	rad54l2	100	60.432	Xiphophorus_maculatus