EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000011172 (Gene tree)
Gene ID: 101065690
Gene Symbol: rbm34
Alias: zgc:92062
Full Name: RNA binding motif protein 34
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 11569 bases
Position: chr17:4326489-4338057
Accession: 101065690
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000056116	RRM_1	PF00076.22	1.4e-25	1	2
ENSTRUP00000056116	RRM_1	PF00076.22	1.4e-25	2	2
ENSTRUP00000028199	RRM_1	PF00076.22	2.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000051845	-	5481	XM_003972245	ENSTRUP00000056116	394 (aa)	XP_003972294	UPI0005D180C4
ENSTRUT00000028311	-	1176	-	ENSTRUP00000028199	391 (aa)	-	H2TU41

Gene Model

Click here to download ENSTRUG00000011172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000011172's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000011172	rbm34	82	42.229	ENSG00000188739	RBM34	82	39.884	Homo_sapiens
ENSTRUG00000011172	rbm34	93	62.234	ENSAPOG00000004027	rbm34	98	56.283	Acanthochromis_polyacanthus
ENSTRUG00000011172	rbm34	96	55.867	ENSACIG00000014842	rbm34	85	55.867	Amphilophus_citrinellus
ENSTRUG00000011172	rbm34	95	61.168	ENSAOCG00000006146	rbm34	93	61.097	Amphiprion_ocellaris
ENSTRUG00000011172	rbm34	95	60.149	ENSAPEG00000022105	rbm34	98	54.630	Amphiprion_percula
ENSTRUG00000011172	rbm34	98	62.095	ENSATEG00000016567	rbm34	95	62.095	Anabas_testudineus
ENSTRUG00000011172	rbm34	73	50.171	ENSAPLG00000004344	RBM34	94	50.171	Anas_platyrhynchos
ENSTRUG00000011172	rbm34	89	42.246	ENSACAG00000001253	RBM34	94	37.170	Anolis_carolinensis
ENSTRUG00000011172	rbm34	84	40.934	ENSANAG00000029971	RBM34	81	42.192	Aotus_nancymaae
ENSTRUG00000011172	rbm34	94	61.082	ENSACLG00000018471	rbm34	79	61.082	Astatotilapia_calliptera
ENSTRUG00000011172	rbm34	97	60.050	ENSACLG00000026337	rbm34	93	60.050	Astatotilapia_calliptera
ENSTRUG00000011172	rbm34	91	42.172	ENSAMXG00000021328	rbm34	95	42.686	Astyanax_mexicanus
ENSTRUG00000011172	rbm34	81	43.195	ENSCJAG00000018125	RBM34	77	44.311	Callithrix_jacchus
ENSTRUG00000011172	rbm34	82	43.275	ENSCAFG00000011507	RBM34	91	41.693	Canis_familiaris
ENSTRUG00000011172	rbm34	82	45.000	ENSTSYG00000009942	RBM34	79	45.000	Carlito_syrichta
ENSTRUG00000011172	rbm34	62	41.270	ENSCAPG00000015346	RBM34	69	41.270	Cavia_aperea
ENSTRUG00000011172	rbm34	85	43.855	ENSCPOG00000015213	RBM34	82	44.413	Cavia_porcellus
ENSTRUG00000011172	rbm34	84	43.353	ENSCCAG00000025584	RBM34	80	43.642	Cebus_capucinus
ENSTRUG00000011172	rbm34	82	43.314	ENSCATG00000031771	RBM34	83	40.223	Cercocebus_atys
ENSTRUG00000011172	rbm34	82	42.899	ENSCLAG00000003464	RBM34	80	43.658	Chinchilla_lanigera
ENSTRUG00000011172	rbm34	82	43.605	ENSCSAG00000010079	RBM34	79	43.768	Chlorocebus_sabaeus
ENSTRUG00000011172	rbm34	87	44.837	ENSCPBG00000005460	RBM34	80	44.837	Chrysemys_picta_bellii
ENSTRUG00000011172	rbm34	84	42.776	ENSCANG00000009561	RBM34	80	43.220	Colobus_angolensis_palliatus
ENSTRUG00000011172	rbm34	85	33.238	ENSCGRG00001018721	Rbm34	94	39.552	Cricetulus_griseus_chok1gshd
ENSTRUG00000011172	rbm34	85	37.822	ENSCGRG00000014051	Rbm34	81	38.109	Cricetulus_griseus_crigri
ENSTRUG00000011172	rbm34	92	60.215	ENSCSEG00000000993	rbm34	94	53.511	Cynoglossus_semilaevis
ENSTRUG00000011172	rbm34	88	58.046	ENSCVAG00000018699	rbm34	94	50.382	Cyprinodon_variegatus
ENSTRUG00000011172	rbm34	95	42.750	ENSDARG00000101877	rbm34	100	50.161	Danio_rerio
ENSTRUG00000011172	rbm34	81	44.510	ENSDNOG00000044740	RBM34	78	45.562	Dasypus_novemcinctus
ENSTRUG00000011172	rbm34	61	49.609	ENSDORG00000006420	Rbm34	83	49.609	Dipodomys_ordii
ENSTRUG00000011172	rbm34	58	50.435	ENSEBUG00000012070	rbm34	68	50.435	Eptatretus_burgeri
ENSTRUG00000011172	rbm34	81	33.739	ENSEEUG00000012760	RBM34	77	33.739	Erinaceus_europaeus
ENSTRUG00000011172	rbm34	85	56.047	ENSELUG00000015682	rbm34	98	45.011	Esox_lucius
ENSTRUG00000011172	rbm34	85	42.210	ENSFCAG00000001852	RBM34	81	42.210	Felis_catus
ENSTRUG00000011172	rbm34	76	59.468	ENSFHEG00000010140	rbm34	99	59.016	Fundulus_heteroclitus
ENSTRUG00000011172	rbm34	62	51.984	ENSGMOG00000011683	rbm34	96	54.251	Gadus_morhua
ENSTRUG00000011172	rbm34	55	43.946	ENSGALG00000029915	RBM34	77	43.913	Gallus_gallus
ENSTRUG00000011172	rbm34	86	60.465	ENSGAFG00000017798	rbm34	82	60.465	Gambusia_affinis
ENSTRUG00000011172	rbm34	99	54.327	ENSGACG00000001040	-	95	56.436	Gasterosteus_aculeatus
ENSTRUG00000011172	rbm34	87	43.501	ENSGAGG00000020598	RBM34	86	44.624	Gopherus_agassizii
ENSTRUG00000011172	rbm34	82	41.935	ENSGGOG00000007924	RBM34	78	42.690	Gorilla_gorilla
ENSTRUG00000011172	rbm34	97	60.302	ENSHBUG00000015508	rbm34	93	60.302	Haplochromis_burtoni
ENSTRUG00000011172	rbm34	87	41.979	ENSHGLG00000016495	RBM34	86	41.979	Heterocephalus_glaber_female
ENSTRUG00000011172	rbm34	87	41.979	ENSHGLG00100014678	RBM34	86	41.979	Heterocephalus_glaber_male
ENSTRUG00000011172	rbm34	85	51.613	ENSIPUG00000021952	rbm34	94	44.365	Ictalurus_punctatus
ENSTRUG00000011172	rbm34	82	44.412	ENSSTOG00000002792	RBM34	79	44.412	Ictidomys_tridecemlineatus
ENSTRUG00000011172	rbm34	97	55.696	ENSKMAG00000007790	rbm34	94	55.949	Kryptolebias_marmoratus
ENSTRUG00000011172	rbm34	97	59.113	ENSLBEG00000022530	-	95	59.559	Labrus_bergylta
ENSTRUG00000011172	rbm34	97	49.005	ENSLBEG00000028305	rbm34	98	50.976	Labrus_bergylta
ENSTRUG00000011172	rbm34	93	40.967	ENSLACG00000013628	RBM34	91	40.146	Latimeria_chalumnae
ENSTRUG00000011172	rbm34	93	46.384	ENSLOCG00000015902	rbm34	95	42.956	Lepisosteus_oculatus
ENSTRUG00000011172	rbm34	84	41.620	ENSLAFG00000014289	RBM34	81	41.620	Loxodonta_africana
ENSTRUG00000011172	rbm34	82	43.023	ENSMFAG00000038522	RBM34	83	39.944	Macaca_fascicularis
ENSTRUG00000011172	rbm34	82	43.023	ENSMMUG00000039424	RBM34	87	39.944	Macaca_mulatta
ENSTRUG00000011172	rbm34	82	43.023	ENSMNEG00000040149	RBM34	83	39.944	Macaca_nemestrina
ENSTRUG00000011172	rbm34	97	62.155	ENSMAMG00000018828	rbm34	94	62.972	Mastacembelus_armatus
ENSTRUG00000011172	rbm34	57	62.083	ENSMZEG00005010091	-	84	62.083	Maylandia_zebra
ENSTRUG00000011172	rbm34	97	60.553	ENSMZEG00005021586	rbm34	93	60.553	Maylandia_zebra
ENSTRUG00000011172	rbm34	92	40.609	ENSMGAG00000011921	RBM34	96	41.117	Meleagris_gallopavo
ENSTRUG00000011172	rbm34	84	41.449	ENSMICG00000038704	-	81	41.739	Microcebus_murinus
ENSTRUG00000011172	rbm34	82	42.136	ENSMOCG00000013550	Rbm34	79	42.136	Microtus_ochrogaster
ENSTRUG00000011172	rbm34	95	60.411	ENSMMOG00000018675	rbm34	99	55.138	Mola_mola
ENSTRUG00000011172	rbm34	81	40.000	ENSMODG00000008436	RBM34	77	40.000	Monodelphis_domestica
ENSTRUG00000011172	rbm34	94	58.376	ENSMALG00000007816	rbm34	98	55.890	Monopterus_albus
ENSTRUG00000011172	rbm34	81	42.478	MGP_CAROLIEiJ_G0031732	Rbm34	78	42.478	Mus_caroli
ENSTRUG00000011172	rbm34	81	42.197	ENSMUSG00000033931	Rbm34	77	42.647	Mus_musculus
ENSTRUG00000011172	rbm34	85	42.857	MGP_PahariEiJ_G0023329	Rbm34	81	42.857	Mus_pahari
ENSTRUG00000011172	rbm34	81	42.773	MGP_SPRETEiJ_G0032849	Rbm34	77	42.773	Mus_spretus
ENSTRUG00000011172	rbm34	84	44.476	ENSMPUG00000002849	RBM34	82	44.476	Mustela_putorius_furo
ENSTRUG00000011172	rbm34	82	43.020	ENSMLUG00000016224	RBM34	80	43.539	Myotis_lucifugus
ENSTRUG00000011172	rbm34	82	43.068	ENSNGAG00000010712	Rbm34	80	42.773	Nannospalax_galili
ENSTRUG00000011172	rbm34	95	58.015	ENSNBRG00000010975	rbm34	97	54.115	Neolamprologus_brichardi
ENSTRUG00000011172	rbm34	82	43.314	ENSNLEG00000002610	RBM34	78	43.478	Nomascus_leucogenys
ENSTRUG00000011172	rbm34	51	47.236	ENSMEUG00000005465	-	80	39.080	Notamacropus_eugenii
ENSTRUG00000011172	rbm34	83	43.553	ENSODEG00000006130	RBM34	89	44.000	Octodon_degus
ENSTRUG00000011172	rbm34	97	60.250	ENSONIG00000018121	rbm34	91	60.250	Oreochromis_niloticus
ENSTRUG00000011172	rbm34	94	40.155	ENSOANG00000001206	RBM34	92	37.129	Ornithorhynchus_anatinus
ENSTRUG00000011172	rbm34	85	42.033	ENSOCUG00000009173	RBM34	83	42.033	Oryctolagus_cuniculus
ENSTRUG00000011172	rbm34	94	55.497	ENSORLG00000001221	rbm34	98	50.602	Oryzias_latipes
ENSTRUG00000011172	rbm34	94	55.236	ENSORLG00020016678	rbm34	98	50.361	Oryzias_latipes_hni
ENSTRUG00000011172	rbm34	97	53.652	ENSORLG00015016039	rbm34	98	50.120	Oryzias_latipes_hsok
ENSTRUG00000011172	rbm34	97	55.949	ENSOMEG00000007902	rbm34	94	56.818	Oryzias_melastigma
ENSTRUG00000011172	rbm34	84	39.444	ENSOGAG00000012470	RBM34	81	39.335	Otolemur_garnettii
ENSTRUG00000011172	rbm34	82	40.698	ENSPPAG00000030692	RBM34	82	38.617	Pan_paniscus
ENSTRUG00000011172	rbm34	85	41.926	ENSPPRG00000013597	RBM34	80	42.165	Panthera_pardus
ENSTRUG00000011172	rbm34	85	42.210	ENSPTIG00000011612	RBM34	80	42.450	Panthera_tigris_altaica
ENSTRUG00000011172	rbm34	82	42.229	ENSPTRG00000048646	-	82	39.437	Pan_troglodytes
ENSTRUG00000011172	rbm34	82	42.229	ENSPTRG00000032432	RBM34	82	39.437	Pan_troglodytes
ENSTRUG00000011172	rbm34	82	43.314	ENSPANG00000010411	RBM34	79	43.478	Papio_anubis
ENSTRUG00000011172	rbm34	90	50.000	ENSPKIG00000009284	rbm34	99	41.761	Paramormyrops_kingsleyae
ENSTRUG00000011172	rbm34	87	45.358	ENSPSIG00000011370	RBM34	85	45.093	Pelodiscus_sinensis
ENSTRUG00000011172	rbm34	60	56.904	ENSPMGG00000001183	rbm34	80	45.570	Periophthalmus_magnuspinnatus
ENSTRUG00000011172	rbm34	85	41.834	ENSPEMG00000000265	Rbm34	82	42.693	Peromyscus_maniculatus_bairdii
ENSTRUG00000011172	rbm34	68	48.070	ENSPMAG00000001602	rbm34	75	48.399	Petromyzon_marinus
ENSTRUG00000011172	rbm34	83	38.375	ENSPCIG00000029736	-	67	38.936	Phascolarctos_cinereus
ENSTRUG00000011172	rbm34	85	60.405	ENSPFOG00000009829	-	94	50.123	Poecilia_formosa
ENSTRUG00000011172	rbm34	88	58.774	ENSPLAG00000018385	-	84	58.774	Poecilia_latipinna
ENSTRUG00000011172	rbm34	83	53.030	ENSPMEG00000014440	-	94	46.859	Poecilia_mexicana
ENSTRUG00000011172	rbm34	85	59.538	ENSPREG00000023227	rbm34	94	49.254	Poecilia_reticulata
ENSTRUG00000011172	rbm34	82	42.899	ENSPPYG00000029513	RBM34	78	43.658	Pongo_abelii
ENSTRUG00000011172	rbm34	84	41.972	ENSPCOG00000018448	RBM34	81	41.783	Propithecus_coquereli
ENSTRUG00000011172	rbm34	82	44.023	ENSPVAG00000015158	RBM34	83	43.417	Pteropus_vampyrus
ENSTRUG00000011172	rbm34	97	60.302	ENSPNYG00000004970	rbm34	93	60.302	Pundamilia_nyererei
ENSTRUG00000011172	rbm34	96	45.238	ENSPNAG00000002639	rbm34	97	45.476	Pygocentrus_nattereri
ENSTRUG00000011172	rbm34	85	42.286	ENSRNOG00000020004	Rbm34	81	42.286	Rattus_norvegicus
ENSTRUG00000011172	rbm34	82	43.605	ENSRBIG00000032900	RBM34	78	43.768	Rhinopithecus_bieti
ENSTRUG00000011172	rbm34	82	43.605	ENSRROG00000039131	RBM34	78	43.768	Rhinopithecus_roxellana
ENSTRUG00000011172	rbm34	80	40.708	ENSSHAG00000015812	RBM34	92	35.322	Sarcophilus_harrisii
ENSTRUG00000011172	rbm34	93	48.663	ENSSFOG00015000148	rbm34	88	48.663	Scleropages_formosus
ENSTRUG00000011172	rbm34	99	59.223	ENSSMAG00000020955	rbm34	95	59.223	Scophthalmus_maximus
ENSTRUG00000011172	rbm34	99	61.314	ENSSDUG00000019237	rbm34	95	61.557	Seriola_dumerili
ENSTRUG00000011172	rbm34	99	56.829	ENSSLDG00000000796	rbm34	95	58.637	Seriola_lalandi_dorsalis
ENSTRUG00000011172	rbm34	96	38.131	ENSSPUG00000015430	RBM34	92	42.347	Sphenodon_punctatus
ENSTRUG00000011172	rbm34	99	60.000	ENSSPAG00000010174	rbm34	95	60.000	Stegastes_partitus
ENSTRUG00000011172	rbm34	96	57.421	ENSTNIG00000001302	-	98	60.000	Tetraodon_nigroviridis
ENSTRUG00000011172	rbm34	80	47.385	ENSXETG00000023721	rbm34	78	46.667	Xenopus_tropicalis
ENSTRUG00000011172	rbm34	84	52.410	ENSXCOG00000011190	RBM34	96	47.185	Xiphophorus_couchianus
ENSTRUG00000011172	rbm34	86	60.807	ENSXMAG00000029852	rbm34	94	50.251	Xiphophorus_maculatus