EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000011226 (Gene tree)
Gene ID: 101076726
Gene Symbol: gnl1
Alias: zgc:154008
Full Name: G protein nucleolar 1 (putative)
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 11678 bases
Position: chr7:13705088-13716765
Accession: 101076726
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000028336	MMR_HSR1	PF01926.23	2.3e-14	1	1
ENSTRUP00000028337	MMR_HSR1	PF01926.23	3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000028449	-	3021	-	ENSTRUP00000028337	702 (aa)	-	H2TUH8
ENSTRUT00000028448	-	4069	XM_011605920	ENSTRUP00000028336	640 (aa)	XP_011604222	H2TUH7

Gene Model

Click here to download ENSTRUG00000011226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000011226's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000011226	gnl1	61	31.280	ENSTRUG00000017380	lsg1	64	31.754

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000011226	gnl1	85	56.884	ENSG00000204590	GNL1	90	58.047	Homo_sapiens
ENSTRUG00000011226	gnl1	92	75.041	ENSAPOG00000006315	gnl1	100	75.654	Acanthochromis_polyacanthus
ENSTRUG00000011226	gnl1	92	52.648	ENSAMEG00000013421	GNL1	90	58.047	Ailuropoda_melanoleuca
ENSTRUG00000011226	gnl1	92	75.980	ENSACIG00000013539	gnl1	100	76.606	Amphilophus_citrinellus
ENSTRUG00000011226	gnl1	92	75.487	ENSAOCG00000008320	gnl1	100	76.105	Amphiprion_ocellaris
ENSTRUG00000011226	gnl1	92	75.325	ENSAPEG00000011154	gnl1	100	75.941	Amphiprion_percula
ENSTRUG00000011226	gnl1	92	76.026	ENSATEG00000020647	gnl1	100	75.534	Anabas_testudineus
ENSTRUG00000011226	gnl1	85	57.377	ENSACAG00000010395	GNL1	100	54.028	Anolis_carolinensis
ENSTRUG00000011226	gnl1	92	52.960	ENSANAG00000028106	GNL1	90	57.477	Aotus_nancymaae
ENSTRUG00000011226	gnl1	91	76.471	ENSACLG00000025394	gnl1	100	75.698	Astatotilapia_calliptera
ENSTRUG00000011226	gnl1	86	71.971	ENSAMXG00000016080	gnl1	100	64.874	Astyanax_mexicanus
ENSTRUG00000011226	gnl1	92	52.970	ENSBTAG00000025516	GNL1	90	57.505	Bos_taurus
ENSTRUG00000011226	gnl1	92	52.800	ENSCJAG00000019996	GNL1	90	57.658	Callithrix_jacchus
ENSTRUG00000011226	gnl1	92	52.970	ENSCAFG00000000396	GNL1	90	57.505	Canis_familiaris
ENSTRUG00000011226	gnl1	92	52.970	ENSCAFG00020017556	GNL1	90	57.505	Canis_lupus_dingo
ENSTRUG00000011226	gnl1	92	52.488	ENSCHIG00000019763	GNL1	90	57.505	Capra_hircus
ENSTRUG00000011226	gnl1	92	53.130	ENSTSYG00000000164	GNL1	90	57.685	Carlito_syrichta
ENSTRUG00000011226	gnl1	81	53.650	ENSCAPG00000006662	GNL1	97	53.514	Cavia_aperea
ENSTRUG00000011226	gnl1	92	52.153	ENSCPOG00000001944	GNL1	100	53.407	Cavia_porcellus
ENSTRUG00000011226	gnl1	92	53.130	ENSCCAG00000037467	GNL1	90	57.685	Cebus_capucinus
ENSTRUG00000011226	gnl1	92	52.809	ENSCATG00000045232	GNL1	90	57.685	Cercocebus_atys
ENSTRUG00000011226	gnl1	85	53.578	ENSCLAG00000012557	GNL1	88	57.280	Chinchilla_lanigera
ENSTRUG00000011226	gnl1	92	53.291	ENSCSAG00000008202	GNL1	90	57.685	Chlorocebus_sabaeus
ENSTRUG00000011226	gnl1	63	56.678	ENSCHOG00000010907	GNL1	70	49.649	Choloepus_hoffmanni
ENSTRUG00000011226	gnl1	85	57.299	ENSCPBG00000018821	GNL1	90	59.434	Chrysemys_picta_bellii
ENSTRUG00000011226	gnl1	83	46.727	ENSCING00000014499	-	100	46.824	Ciona_intestinalis
ENSTRUG00000011226	gnl1	85	45.404	ENSCSAVG00000007354	-	90	45.404	Ciona_savignyi
ENSTRUG00000011226	gnl1	92	53.130	ENSCANG00000012933	GNL1	90	57.505	Colobus_angolensis_palliatus
ENSTRUG00000011226	gnl1	92	54.006	ENSCGRG00001004986	Gnl1	100	54.358	Cricetulus_griseus_chok1gshd
ENSTRUG00000011226	gnl1	85	54.498	ENSCGRG00000014309	Gnl1	99	53.833	Cricetulus_griseus_crigri
ENSTRUG00000011226	gnl1	87	68.051	ENSCSEG00000019714	gnl1	92	68.051	Cynoglossus_semilaevis
ENSTRUG00000011226	gnl1	92	73.563	ENSCVAG00000022650	gnl1	100	72.742	Cyprinodon_variegatus
ENSTRUG00000011226	gnl1	85	73.588	ENSDARG00000061789	gnl1	91	73.588	Danio_rerio
ENSTRUG00000011226	gnl1	88	49.215	ENSDNOG00000041571	GNL1	92	50.619	Dasypus_novemcinctus
ENSTRUG00000011226	gnl1	85	43.964	FBgn0032882	Ns4	83	45.726	Drosophila_melanogaster
ENSTRUG00000011226	gnl1	92	52.809	ENSEASG00005018610	GNL1	90	57.505	Equus_asinus_asinus
ENSTRUG00000011226	gnl1	92	52.970	ENSECAG00000023081	GNL1	90	57.505	Equus_caballus
ENSTRUG00000011226	gnl1	92	69.144	ENSELUG00000006281	gnl1	100	68.871	Esox_lucius
ENSTRUG00000011226	gnl1	92	52.970	ENSFCAG00000007676	GNL1	90	57.505	Felis_catus
ENSTRUG00000011226	gnl1	75	59.746	ENSFDAG00000000584	GNL1	88	59.746	Fukomys_damarensis
ENSTRUG00000011226	gnl1	92	72.742	ENSFHEG00000011353	gnl1	100	71.921	Fundulus_heteroclitus
ENSTRUG00000011226	gnl1	92	72.848	ENSGMOG00000015224	gnl1	100	72.893	Gadus_morhua
ENSTRUG00000011226	gnl1	92	73.641	ENSGAFG00000014611	gnl1	99	73.641	Gambusia_affinis
ENSTRUG00000011226	gnl1	92	73.607	ENSGACG00000009765	gnl1	100	73.607	Gasterosteus_aculeatus
ENSTRUG00000011226	gnl1	85	56.703	ENSGGOG00000014590	GNL1	90	57.866	Gorilla_gorilla
ENSTRUG00000011226	gnl1	91	76.471	ENSHBUG00000016745	gnl1	100	75.698	Haplochromis_burtoni
ENSTRUG00000011226	gnl1	85	55.515	ENSHGLG00000017193	GNL1	90	57.581	Heterocephalus_glaber_female
ENSTRUG00000011226	gnl1	75	56.660	ENSHGLG00100009994	GNL1	88	57.717	Heterocephalus_glaber_male
ENSTRUG00000011226	gnl1	91	78.431	ENSHCOG00000012493	gnl1	99	78.431	Hippocampus_comes
ENSTRUG00000011226	gnl1	92	66.337	ENSIPUG00000004850	gnl1	100	66.502	Ictalurus_punctatus
ENSTRUG00000011226	gnl1	92	53.055	ENSSTOG00000011822	GNL1	90	57.609	Ictidomys_tridecemlineatus
ENSTRUG00000011226	gnl1	92	53.429	ENSJJAG00000010831	-	90	58.590	Jaculus_jaculus
ENSTRUG00000011226	gnl1	92	73.026	ENSKMAG00000009059	gnl1	99	73.026	Kryptolebias_marmoratus
ENSTRUG00000011226	gnl1	92	72.906	ENSLBEG00000011038	gnl1	100	72.787	Labrus_bergylta
ENSTRUG00000011226	gnl1	85	58.425	ENSLACG00000001713	GNL1	89	58.425	Latimeria_chalumnae
ENSTRUG00000011226	gnl1	92	53.451	ENSLAFG00000030406	GNL1	92	56.890	Loxodonta_africana
ENSTRUG00000011226	gnl1	92	52.809	ENSMFAG00000001167	GNL1	90	57.685	Macaca_fascicularis
ENSTRUG00000011226	gnl1	92	52.809	ENSMMUG00000020077	GNL1	90	57.685	Macaca_mulatta
ENSTRUG00000011226	gnl1	92	52.809	ENSMNEG00000031618	GNL1	90	57.685	Macaca_nemestrina
ENSTRUG00000011226	gnl1	92	52.809	ENSMLEG00000030252	GNL1	90	57.685	Mandrillus_leucophaeus
ENSTRUG00000011226	gnl1	92	75.081	ENSMAMG00000003554	gnl1	100	75.698	Mastacembelus_armatus
ENSTRUG00000011226	gnl1	91	76.471	ENSMZEG00005018216	gnl1	100	75.698	Maylandia_zebra
ENSTRUG00000011226	gnl1	92	53.612	ENSMAUG00000015596	Gnl1	90	58.696	Mesocricetus_auratus
ENSTRUG00000011226	gnl1	92	52.648	ENSMICG00000014708	GNL1	90	57.324	Microcebus_murinus
ENSTRUG00000011226	gnl1	92	54.093	ENSMOCG00000020934	Gnl1	90	58.590	Microtus_ochrogaster
ENSTRUG00000011226	gnl1	92	77.325	ENSMMOG00000015833	gnl1	100	77.961	Mola_mola
ENSTRUG00000011226	gnl1	85	55.877	ENSMODG00000015964	GNL1	86	57.581	Monodelphis_domestica
ENSTRUG00000011226	gnl1	92	74.795	ENSMALG00000022523	gnl1	100	74.426	Monopterus_albus
ENSTRUG00000011226	gnl1	85	56.522	MGP_CAROLIEiJ_G0021547	Gnl1	90	57.685	Mus_caroli
ENSTRUG00000011226	gnl1	92	53.772	ENSMUSG00000024429	Gnl1	90	57.866	Mus_musculus
ENSTRUG00000011226	gnl1	92	53.612	MGP_PahariEiJ_G0020539	Gnl1	90	57.685	Mus_pahari
ENSTRUG00000011226	gnl1	92	53.612	MGP_SPRETEiJ_G0022452	Gnl1	100	53.933	Mus_spretus
ENSTRUG00000011226	gnl1	85	53.380	ENSMPUG00000011828	GNL1	70	57.088	Mustela_putorius_furo
ENSTRUG00000011226	gnl1	86	53.780	ENSMLUG00000008722	GNL1	85	57.390	Myotis_lucifugus
ENSTRUG00000011226	gnl1	92	52.791	ENSNGAG00000000745	Gnl1	90	57.790	Nannospalax_galili
ENSTRUG00000011226	gnl1	91	76.471	ENSNBRG00000020813	gnl1	100	75.618	Neolamprologus_brichardi
ENSTRUG00000011226	gnl1	85	53.430	ENSNLEG00000005058	GNL1	79	54.595	Nomascus_leucogenys
ENSTRUG00000011226	gnl1	81	54.144	ENSOPRG00000000007	GNL1	88	58.263	Ochotona_princeps
ENSTRUG00000011226	gnl1	92	51.520	ENSODEG00000018111	GNL1	100	53.323	Octodon_degus
ENSTRUG00000011226	gnl1	91	76.471	ENSONIG00000013044	gnl1	100	75.369	Oreochromis_niloticus
ENSTRUG00000011226	gnl1	85	55.957	ENSOCUG00000002110	GNL1	90	56.577	Oryctolagus_cuniculus
ENSTRUG00000011226	gnl1	92	71.334	ENSORLG00000012862	gnl1	100	70.840	Oryzias_latipes
ENSTRUG00000011226	gnl1	92	70.840	ENSORLG00020003923	gnl1	100	70.511	Oryzias_latipes_hni
ENSTRUG00000011226	gnl1	92	70.016	ENSORLG00015009552	gnl1	100	70.346	Oryzias_latipes_hsok
ENSTRUG00000011226	gnl1	92	72.712	ENSOMEG00000014409	gnl1	100	72.817	Oryzias_melastigma
ENSTRUG00000011226	gnl1	89	52.365	ENSOGAG00000024106	-	92	55.957	Otolemur_garnettii
ENSTRUG00000011226	gnl1	92	53.291	ENSOGAG00000004428	-	90	57.866	Otolemur_garnettii
ENSTRUG00000011226	gnl1	92	53.323	ENSOARG00000012966	GNL1	90	56.684	Ovis_aries
ENSTRUG00000011226	gnl1	85	56.884	ENSPPAG00000044009	GNL1	90	58.047	Pan_paniscus
ENSTRUG00000011226	gnl1	92	53.291	ENSPPRG00000007039	GNL1	90	57.866	Panthera_pardus
ENSTRUG00000011226	gnl1	92	53.130	ENSPTIG00000011307	GNL1	90	57.685	Panthera_tigris_altaica
ENSTRUG00000011226	gnl1	85	56.703	ENSPTRG00000017928	GNL1	90	57.658	Pan_troglodytes
ENSTRUG00000011226	gnl1	92	52.809	ENSPANG00000020097	GNL1	90	57.685	Papio_anubis
ENSTRUG00000011226	gnl1	85	68.978	ENSPKIG00000002200	gnl1	90	68.978	Paramormyrops_kingsleyae
ENSTRUG00000011226	gnl1	79	46.731	ENSPSIG00000008441	GNL1	99	44.276	Pelodiscus_sinensis
ENSTRUG00000011226	gnl1	92	73.623	ENSPMGG00000007259	gnl1	100	74.290	Periophthalmus_magnuspinnatus
ENSTRUG00000011226	gnl1	85	54.861	ENSPEMG00000002731	Gnl1	88	58.349	Peromyscus_maniculatus_bairdii
ENSTRUG00000011226	gnl1	84	56.987	ENSPCIG00000014975	GNL1	90	58.514	Phascolarctos_cinereus
ENSTRUG00000011226	gnl1	92	75.000	ENSPFOG00000015398	gnl1	100	74.178	Poecilia_formosa
ENSTRUG00000011226	gnl1	92	74.752	ENSPLAG00000003231	gnl1	99	73.927	Poecilia_latipinna
ENSTRUG00000011226	gnl1	92	74.836	ENSPMEG00000005001	gnl1	100	74.013	Poecilia_mexicana
ENSTRUG00000011226	gnl1	92	74.836	ENSPREG00000012818	gnl1	100	74.013	Poecilia_reticulata
ENSTRUG00000011226	gnl1	92	53.130	ENSPPYG00000016408	GNL1	90	57.685	Pongo_abelii
ENSTRUG00000011226	gnl1	55	61.806	ENSPCAG00000004522	-	70	61.806	Procavia_capensis
ENSTRUG00000011226	gnl1	92	53.130	ENSPCOG00000015669	GNL1	90	57.505	Propithecus_coquereli
ENSTRUG00000011226	gnl1	92	53.270	ENSPVAG00000003970	GNL1	90	58.333	Pteropus_vampyrus
ENSTRUG00000011226	gnl1	91	76.471	ENSPNYG00000022614	gnl1	100	75.862	Pundamilia_nyererei
ENSTRUG00000011226	gnl1	92	68.152	ENSPNAG00000021257	gnl1	100	68.317	Pygocentrus_nattereri
ENSTRUG00000011226	gnl1	92	54.254	ENSRNOG00000000798	Gnl1	87	68.280	Rattus_norvegicus
ENSTRUG00000011226	gnl1	92	52.809	ENSRBIG00000019143	GNL1	90	57.685	Rhinopithecus_bieti
ENSTRUG00000011226	gnl1	92	52.809	ENSRROG00000030029	GNL1	90	57.685	Rhinopithecus_roxellana
ENSTRUG00000011226	gnl1	92	53.130	ENSSBOG00000031909	GNL1	90	57.685	Saimiri_boliviensis_boliviensis
ENSTRUG00000011226	gnl1	92	52.827	ENSSHAG00000007557	GNL1	92	57.066	Sarcophilus_harrisii
ENSTRUG00000011226	gnl1	92	66.612	ENSSFOG00015013921	gnl1	100	66.830	Scleropages_formosus
ENSTRUG00000011226	gnl1	91	78.431	ENSSMAG00000010147	gnl1	99	78.431	Scophthalmus_maximus
ENSTRUG00000011226	gnl1	92	74.838	ENSSDUG00000013824	gnl1	100	75.450	Seriola_dumerili
ENSTRUG00000011226	gnl1	92	74.351	ENSSLDG00000024560	gnl1	100	75.123	Seriola_lalandi_dorsalis
ENSTRUG00000011226	gnl1	52	55.078	ENSSARG00000006156	-	69	66.486	Sorex_araneus
ENSTRUG00000011226	gnl1	85	58.000	ENSSPUG00000015374	GNL1	88	58.909	Sphenodon_punctatus
ENSTRUG00000011226	gnl1	92	75.941	ENSSPAG00000017541	gnl1	100	75.941	Stegastes_partitus
ENSTRUG00000011226	gnl1	92	53.291	ENSSSCG00000001372	GNL1	97	58.148	Sus_scrofa
ENSTRUG00000011226	gnl1	92	81.681	ENSTNIG00000008017	gnl1	100	81.176	Tetraodon_nigroviridis
ENSTRUG00000011226	gnl1	92	49.759	ENSTBEG00000007538	GNL1	89	53.888	Tupaia_belangeri
ENSTRUG00000011226	gnl1	92	52.657	ENSTTRG00000008287	GNL1	90	57.065	Tursiops_truncatus
ENSTRUG00000011226	gnl1	92	52.809	ENSUAMG00000007671	GNL1	90	57.505	Ursus_americanus
ENSTRUG00000011226	gnl1	92	50.079	ENSUMAG00000018935	GNL1	88	58.065	Ursus_maritimus
ENSTRUG00000011226	gnl1	92	52.970	ENSVVUG00000009537	GNL1	91	57.505	Vulpes_vulpes
ENSTRUG00000011226	gnl1	84	55.636	ENSXETG00000024087	gnl1	93	54.867	Xenopus_tropicalis
ENSTRUG00000011226	gnl1	92	74.507	ENSXCOG00000019185	gnl1	100	73.684	Xiphophorus_couchianus
ENSTRUG00000011226	gnl1	92	74.671	ENSXMAG00000011015	gnl1	100	73.849	Xiphophorus_maculatus