EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000011278 (Gene tree)
Gene ID: 101071732
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5229 bases
Position: chr9:2435279-2440507
Accession: 101071732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000028469	PRP4	PF08799.11	4.6e-12	1	1
ENSTRUP00000028469	Prp18	PF02840.15	5.9e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000028583	-	1672	XM_003967095	ENSTRUP00000028469	341 (aa)	XP_003967144	H2TUW0

Gene Model

Click here to download ENSTRUG00000011278's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000011278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000011278	prpf18	100	82.456	ENSG00000165630	PRPF18	100	82.456	Homo_sapiens
ENSTRUG00000011278	prpf18	100	90.323	ENSAPOG00000024177	prpf18	100	90.323	Acanthochromis_polyacanthus
ENSTRUG00000011278	prpf18	100	81.871	ENSAMEG00000013591	-	100	81.871	Ailuropoda_melanoleuca
ENSTRUG00000011278	prpf18	100	89.736	ENSACIG00000001186	prpf18	100	89.736	Amphilophus_citrinellus
ENSTRUG00000011278	prpf18	98	90.419	ENSAOCG00000006572	prpf18	94	88.012	Amphiprion_ocellaris
ENSTRUG00000011278	prpf18	100	90.616	ENSAPEG00000004564	prpf18	100	90.616	Amphiprion_percula
ENSTRUG00000011278	prpf18	100	89.150	ENSATEG00000000303	prpf18	100	89.150	Anabas_testudineus
ENSTRUG00000011278	prpf18	99	81.765	ENSAPLG00000003387	-	99	81.765	Anas_platyrhynchos
ENSTRUG00000011278	prpf18	100	81.686	ENSACAG00000000818	-	100	81.686	Anolis_carolinensis
ENSTRUG00000011278	prpf18	100	82.164	ENSANAG00000037445	-	100	82.164	Aotus_nancymaae
ENSTRUG00000011278	prpf18	100	88.856	ENSACLG00000026296	prpf18	100	88.856	Astatotilapia_calliptera
ENSTRUG00000011278	prpf18	100	85.429	ENSAMXG00000012848	prpf18	100	85.429	Astyanax_mexicanus
ENSTRUG00000011278	prpf18	100	81.579	ENSBTAG00000017244	PRPF18	100	81.579	Bos_taurus
ENSTRUG00000011278	prpf18	97	38.841	WBGene00009320	F32B6.3	96	38.841	Caenorhabditis_elegans
ENSTRUG00000011278	prpf18	100	82.164	ENSCJAG00000009432	-	100	82.164	Callithrix_jacchus
ENSTRUG00000011278	prpf18	100	81.871	ENSCAFG00000004735	-	100	81.871	Canis_familiaris
ENSTRUG00000011278	prpf18	100	81.871	ENSCAFG00020007712	-	100	81.871	Canis_lupus_dingo
ENSTRUG00000011278	prpf18	100	81.579	ENSCHIG00000000499	-	100	81.579	Capra_hircus
ENSTRUG00000011278	prpf18	100	81.871	ENSTSYG00000003517	-	100	81.871	Carlito_syrichta
ENSTRUG00000011278	prpf18	100	82.456	ENSCPOG00000021069	-	100	82.456	Cavia_porcellus
ENSTRUG00000011278	prpf18	100	82.164	ENSCCAG00000036822	-	100	82.164	Cebus_capucinus
ENSTRUG00000011278	prpf18	100	72.222	ENSCATG00000016633	-	100	72.222	Cercocebus_atys
ENSTRUG00000011278	prpf18	100	82.164	ENSCLAG00000011770	-	100	82.164	Chinchilla_lanigera
ENSTRUG00000011278	prpf18	100	80.342	ENSCSAG00000013109	-	100	80.342	Chlorocebus_sabaeus
ENSTRUG00000011278	prpf18	100	77.528	ENSCPBG00000003100	-	100	78.371	Chrysemys_picta_bellii
ENSTRUG00000011278	prpf18	99	56.765	ENSCING00000020481	-	97	56.765	Ciona_intestinalis
ENSTRUG00000011278	prpf18	99	56.012	ENSCSAVG00000010546	-	99	55.030	Ciona_savignyi
ENSTRUG00000011278	prpf18	100	82.456	ENSCANG00000034900	-	100	82.456	Colobus_angolensis_palliatus
ENSTRUG00000011278	prpf18	100	82.164	ENSCGRG00001023665	Prpf18	100	82.164	Cricetulus_griseus_chok1gshd
ENSTRUG00000011278	prpf18	100	82.164	ENSCGRG00000014690	Prpf18	100	82.164	Cricetulus_griseus_crigri
ENSTRUG00000011278	prpf18	100	86.217	ENSCSEG00000005536	prpf18	99	86.217	Cynoglossus_semilaevis
ENSTRUG00000011278	prpf18	100	89.150	ENSCVAG00000012401	prpf18	100	89.150	Cyprinodon_variegatus
ENSTRUG00000011278	prpf18	100	85.965	ENSDARG00000058306	prpf18	100	85.965	Danio_rerio
ENSTRUG00000011278	prpf18	100	81.871	ENSDNOG00000035607	-	100	81.871	Dasypus_novemcinctus
ENSTRUG00000011278	prpf18	100	81.579	ENSDORG00000000858	Prpf18	100	81.579	Dipodomys_ordii
ENSTRUG00000011278	prpf18	99	51.775	FBgn0027784	Prp18	98	51.775	Drosophila_melanogaster
ENSTRUG00000011278	prpf18	100	73.977	ENSETEG00000015060	-	100	73.977	Echinops_telfairi
ENSTRUG00000011278	prpf18	100	68.876	ENSEBUG00000016502	prpf18	99	68.012	Eptatretus_burgeri
ENSTRUG00000011278	prpf18	100	82.164	ENSEASG00005019373	-	100	82.164	Equus_asinus_asinus
ENSTRUG00000011278	prpf18	100	82.164	ENSECAG00000006997	PRPF18	100	82.164	Equus_caballus
ENSTRUG00000011278	prpf18	73	100.000	ENSEEUG00000001171	-	79	100.000	Erinaceus_europaeus
ENSTRUG00000011278	prpf18	100	86.880	ENSELUG00000022190	prpf18	100	86.880	Esox_lucius
ENSTRUG00000011278	prpf18	100	82.164	ENSFCAG00000004436	-	100	82.164	Felis_catus
ENSTRUG00000011278	prpf18	92	79.692	ENSFALG00000001912	-	97	80.000	Ficedula_albicollis
ENSTRUG00000011278	prpf18	99	56.232	ENSFDAG00000010713	-	97	56.232	Fukomys_damarensis
ENSTRUG00000011278	prpf18	94	84.062	ENSFDAG00000014026	-	100	84.062	Fukomys_damarensis
ENSTRUG00000011278	prpf18	80	91.575	ENSFHEG00000020125	prpf18	98	91.386	Fundulus_heteroclitus
ENSTRUG00000011278	prpf18	99	84.706	ENSGMOG00000012210	prpf18	99	84.706	Gadus_morhua
ENSTRUG00000011278	prpf18	100	82.749	ENSGALG00000043593	-	100	82.749	Gallus_gallus
ENSTRUG00000011278	prpf18	100	90.029	ENSGAFG00000006034	prpf18	100	90.029	Gambusia_affinis
ENSTRUG00000011278	prpf18	100	87.097	ENSGACG00000012232	prpf18	100	87.097	Gasterosteus_aculeatus
ENSTRUG00000011278	prpf18	100	81.579	ENSGAGG00000016878	-	100	81.579	Gopherus_agassizii
ENSTRUG00000011278	prpf18	92	81.646	ENSGGOG00000025188	-	96	81.646	Gorilla_gorilla
ENSTRUG00000011278	prpf18	100	88.856	ENSHBUG00000010264	prpf18	100	88.856	Haplochromis_burtoni
ENSTRUG00000011278	prpf18	100	81.871	ENSHGLG00000018534	PRPF18	100	81.871	Heterocephalus_glaber_female
ENSTRUG00000011278	prpf18	94	83.230	ENSHGLG00100012161	-	98	83.230	Heterocephalus_glaber_male
ENSTRUG00000011278	prpf18	100	89.736	ENSHCOG00000015987	prpf18	100	89.736	Hippocampus_comes
ENSTRUG00000011278	prpf18	100	80.453	ENSIPUG00000007432	prpf18	100	81.303	Ictalurus_punctatus
ENSTRUG00000011278	prpf18	100	82.164	ENSSTOG00000008735	-	100	82.164	Ictidomys_tridecemlineatus
ENSTRUG00000011278	prpf18	100	82.456	ENSJJAG00000024041	-	100	82.456	Jaculus_jaculus
ENSTRUG00000011278	prpf18	100	60.350	ENSJJAG00000015191	-	100	60.350	Jaculus_jaculus
ENSTRUG00000011278	prpf18	100	89.736	ENSKMAG00000012124	prpf18	100	89.736	Kryptolebias_marmoratus
ENSTRUG00000011278	prpf18	100	85.044	ENSLBEG00000028466	prpf18	99	86.866	Labrus_bergylta
ENSTRUG00000011278	prpf18	100	83.333	ENSLACG00000009885	prpf18	100	84.211	Latimeria_chalumnae
ENSTRUG00000011278	prpf18	100	85.673	ENSLOCG00000016736	prpf18	100	85.673	Lepisosteus_oculatus
ENSTRUG00000011278	prpf18	100	82.456	ENSLAFG00000007753	-	100	82.456	Loxodonta_africana
ENSTRUG00000011278	prpf18	100	82.456	ENSMFAG00000000540	-	100	82.456	Macaca_fascicularis
ENSTRUG00000011278	prpf18	100	82.456	ENSMMUG00000015071	PRPF18	93	91.391	Macaca_mulatta
ENSTRUG00000011278	prpf18	100	82.456	ENSMNEG00000024679	-	100	82.456	Macaca_nemestrina
ENSTRUG00000011278	prpf18	100	67.251	ENSMLEG00000031715	-	100	67.251	Mandrillus_leucophaeus
ENSTRUG00000011278	prpf18	100	90.029	ENSMAMG00000006610	prpf18	100	90.029	Mastacembelus_armatus
ENSTRUG00000011278	prpf18	100	88.856	ENSMZEG00005019392	prpf18	100	88.856	Maylandia_zebra
ENSTRUG00000011278	prpf18	100	82.749	ENSMGAG00000005023	-	100	82.749	Meleagris_gallopavo
ENSTRUG00000011278	prpf18	100	82.749	ENSMICG00000006572	-	100	82.749	Microcebus_murinus
ENSTRUG00000011278	prpf18	100	82.456	ENSMOCG00000021468	Prpf18	100	82.456	Microtus_ochrogaster
ENSTRUG00000011278	prpf18	100	91.496	ENSMMOG00000013012	prpf18	100	91.496	Mola_mola
ENSTRUG00000011278	prpf18	100	75.439	ENSMODG00000024043	-	100	75.439	Monodelphis_domestica
ENSTRUG00000011278	prpf18	96	76.627	ENSMODG00000016902	-	92	76.627	Monodelphis_domestica
ENSTRUG00000011278	prpf18	100	79.251	ENSMALG00000005486	prpf18	100	81.844	Monopterus_albus
ENSTRUG00000011278	prpf18	100	81.871	MGP_CAROLIEiJ_G0023143	Prpf18	100	90.411	Mus_caroli
ENSTRUG00000011278	prpf18	100	82.164	ENSMUSG00000039449	Prpf18	100	90.411	Mus_musculus
ENSTRUG00000011278	prpf18	100	82.164	MGP_PahariEiJ_G0019203	Prpf18	100	90.411	Mus_pahari
ENSTRUG00000011278	prpf18	100	82.164	MGP_SPRETEiJ_G0024061	Prpf18	100	90.411	Mus_spretus
ENSTRUG00000011278	prpf18	100	81.579	ENSMPUG00000000938	-	100	81.579	Mustela_putorius_furo
ENSTRUG00000011278	prpf18	100	81.579	ENSMLUG00000009200	-	100	81.579	Myotis_lucifugus
ENSTRUG00000011278	prpf18	100	82.456	ENSNGAG00000012500	-	100	82.456	Nannospalax_galili
ENSTRUG00000011278	prpf18	68	80.172	ENSNGAG00000023550	-	82	80.870	Nannospalax_galili
ENSTRUG00000011278	prpf18	100	88.856	ENSNBRG00000001778	prpf18	100	88.856	Neolamprologus_brichardi
ENSTRUG00000011278	prpf18	100	82.456	ENSNLEG00000012186	-	100	82.456	Nomascus_leucogenys
ENSTRUG00000011278	prpf18	76	70.656	ENSMEUG00000005032	-	75	70.656	Notamacropus_eugenii
ENSTRUG00000011278	prpf18	77	63.396	ENSOPRG00000002153	-	100	63.396	Ochotona_princeps
ENSTRUG00000011278	prpf18	100	81.579	ENSODEG00000003770	-	100	81.579	Octodon_degus
ENSTRUG00000011278	prpf18	98	88.623	ENSONIG00000014854	prpf18	96	88.623	Oreochromis_niloticus
ENSTRUG00000011278	prpf18	100	83.041	ENSOANG00000015404	-	100	83.041	Ornithorhynchus_anatinus
ENSTRUG00000011278	prpf18	100	82.164	ENSOCUG00000027756	-	97	82.477	Oryctolagus_cuniculus
ENSTRUG00000011278	prpf18	100	86.857	ENSORLG00000010293	prpf18	100	86.857	Oryzias_latipes
ENSTRUG00000011278	prpf18	100	89.150	ENSORLG00020001530	prpf18	100	89.150	Oryzias_latipes_hni
ENSTRUG00000011278	prpf18	100	88.856	ENSORLG00015013705	prpf18	100	88.856	Oryzias_latipes_hsok
ENSTRUG00000011278	prpf18	100	90.909	ENSOMEG00000009167	prpf18	100	90.909	Oryzias_melastigma
ENSTRUG00000011278	prpf18	100	81.579	ENSOGAG00000007294	-	100	81.579	Otolemur_garnettii
ENSTRUG00000011278	prpf18	100	79.772	ENSOARG00000006243	-	100	79.772	Ovis_aries
ENSTRUG00000011278	prpf18	100	82.456	ENSPPAG00000041959	-	100	82.456	Pan_paniscus
ENSTRUG00000011278	prpf18	100	82.164	ENSPPRG00000000107	-	100	82.164	Panthera_pardus
ENSTRUG00000011278	prpf18	100	82.164	ENSPTIG00000021094	-	100	82.164	Panthera_tigris_altaica
ENSTRUG00000011278	prpf18	100	82.456	ENSPTRG00000002306	PRPF18	100	82.456	Pan_troglodytes
ENSTRUG00000011278	prpf18	100	82.164	ENSPANG00000023346	-	100	82.164	Papio_anubis
ENSTRUG00000011278	prpf18	86	98.113	ENSPKIG00000014128	prpf18	96	83.476	Paramormyrops_kingsleyae
ENSTRUG00000011278	prpf18	100	81.579	ENSPSIG00000016064	-	100	81.579	Pelodiscus_sinensis
ENSTRUG00000011278	prpf18	100	81.871	ENSPMGG00000016486	prpf18	100	81.871	Periophthalmus_magnuspinnatus
ENSTRUG00000011278	prpf18	100	82.164	ENSPEMG00000013704	Prpf18	100	82.164	Peromyscus_maniculatus_bairdii
ENSTRUG00000011278	prpf18	100	73.487	ENSPMAG00000000204	prpf18	100	73.487	Petromyzon_marinus
ENSTRUG00000011278	prpf18	92	81.646	ENSPCIG00000012963	-	99	81.646	Phascolarctos_cinereus
ENSTRUG00000011278	prpf18	100	87.429	ENSPFOG00000017611	prpf18	100	87.429	Poecilia_formosa
ENSTRUG00000011278	prpf18	100	89.736	ENSPLAG00000000369	prpf18	100	89.736	Poecilia_latipinna
ENSTRUG00000011278	prpf18	100	90.029	ENSPMEG00000005183	prpf18	100	90.029	Poecilia_mexicana
ENSTRUG00000011278	prpf18	100	89.443	ENSPREG00000015232	prpf18	100	89.443	Poecilia_reticulata
ENSTRUG00000011278	prpf18	100	82.164	ENSPPYG00000002101	PRPF18	100	82.164	Pongo_abelii
ENSTRUG00000011278	prpf18	100	64.327	ENSPCAG00000010833	-	100	64.327	Procavia_capensis
ENSTRUG00000011278	prpf18	100	77.419	ENSPCOG00000013057	-	100	77.419	Propithecus_coquereli
ENSTRUG00000011278	prpf18	100	50.292	ENSPVAG00000002947	-	100	50.292	Pteropus_vampyrus
ENSTRUG00000011278	prpf18	100	88.563	ENSPNYG00000003554	prpf18	100	88.563	Pundamilia_nyererei
ENSTRUG00000011278	prpf18	100	84.330	ENSPNAG00000023151	prpf18	100	84.330	Pygocentrus_nattereri
ENSTRUG00000011278	prpf18	100	82.164	ENSRNOG00000018396	Prpf18	100	82.164	Rattus_norvegicus
ENSTRUG00000011278	prpf18	100	82.749	ENSRBIG00000028028	-	100	82.749	Rhinopithecus_bieti
ENSTRUG00000011278	prpf18	100	82.456	ENSRROG00000040695	-	100	82.456	Rhinopithecus_roxellana
ENSTRUG00000011278	prpf18	100	82.164	ENSSBOG00000034482	-	100	82.164	Saimiri_boliviensis_boliviensis
ENSTRUG00000011278	prpf18	100	82.456	ENSSHAG00000016463	-	100	82.456	Sarcophilus_harrisii
ENSTRUG00000011278	prpf18	100	68.129	ENSSHAG00000009669	-	100	68.129	Sarcophilus_harrisii
ENSTRUG00000011278	prpf18	98	82.319	ENSSFOG00015022118	prpf18	100	78.674	Scleropages_formosus
ENSTRUG00000011278	prpf18	77	45.076	ENSSFOG00015021154	-	89	49.785	Scleropages_formosus
ENSTRUG00000011278	prpf18	100	88.270	ENSSMAG00000005308	prpf18	100	88.270	Scophthalmus_maximus
ENSTRUG00000011278	prpf18	100	90.029	ENSSDUG00000015428	prpf18	100	90.029	Seriola_dumerili
ENSTRUG00000011278	prpf18	100	89.736	ENSSLDG00000023989	prpf18	100	89.736	Seriola_lalandi_dorsalis
ENSTRUG00000011278	prpf18	100	55.263	ENSSARG00000005307	-	100	55.263	Sorex_araneus
ENSTRUG00000011278	prpf18	100	82.456	ENSSPUG00000002619	-	100	82.456	Sphenodon_punctatus
ENSTRUG00000011278	prpf18	100	89.736	ENSSPAG00000019502	prpf18	100	89.736	Stegastes_partitus
ENSTRUG00000011278	prpf18	100	81.871	ENSSSCG00000026354	-	100	81.871	Sus_scrofa
ENSTRUG00000011278	prpf18	100	83.333	ENSTGUG00000002286	-	100	83.333	Taeniopygia_guttata
ENSTRUG00000011278	prpf18	100	94.428	ENSTNIG00000000911	prpf18	100	94.428	Tetraodon_nigroviridis
ENSTRUG00000011278	prpf18	79	97.436	ENSTBEG00000013011	-	79	97.436	Tupaia_belangeri
ENSTRUG00000011278	prpf18	100	82.749	ENSTTRG00000011117	PRPF18	100	82.749	Tursiops_truncatus
ENSTRUG00000011278	prpf18	91	83.923	ENSUAMG00000001815	-	93	83.923	Ursus_americanus
ENSTRUG00000011278	prpf18	100	76.901	ENSUMAG00000012329	-	100	76.901	Ursus_maritimus
ENSTRUG00000011278	prpf18	100	76.316	ENSVPAG00000011486	-	100	76.316	Vicugna_pacos
ENSTRUG00000011278	prpf18	100	81.871	ENSVVUG00000005453	-	100	81.871	Vulpes_vulpes
ENSTRUG00000011278	prpf18	100	74.493	ENSXETG00000024057	prpf18	100	74.203	Xenopus_tropicalis
ENSTRUG00000011278	prpf18	100	89.504	ENSXCOG00000020414	prpf18	100	89.504	Xiphophorus_couchianus
ENSTRUG00000011278	prpf18	100	90.323	ENSXMAG00000004713	prpf18	91	90.323	Xiphophorus_maculatus