EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000011354 (Gene tree)
Gene ID: 101067350
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: protein LSM14 homolog B-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2565 bases
Position: chr19:9547139-9549703
Accession: 101067350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000028650	FDF	PF09532.10	1.6e-08	1	1
ENSTRUP00000028650	SM-ATX	PF14438.6	1.6e-08	1	1
ENSTRUP00000028650	LSM14	PF12701.7	8.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000028766	-	1958	XM_011614094	ENSTRUP00000028650	366 (aa)	XP_011612396	H2TVE1

Gene Model

Click here to download ENSTRUG00000011354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000011354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000011354	lsm14b	90	38.035	ENSTRUG00000004046	lsm14aa	88	40.288
ENSTRUG00000011354	lsm14b	90	39.612	ENSTRUG00000015798	lsm14ab	87	41.667
ENSTRUG00000011354	lsm14b	91	48.619	ENSTRUG00000001529	LSM14B	94	50.964

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000011354	lsm14b	92	51.344	ENSG00000149657	LSM14B	96	58.333	Homo_sapiens
ENSTRUG00000011354	lsm14b	100	77.778	ENSAPOG00000001780	lsm14b	100	77.778	Acanthochromis_polyacanthus
ENSTRUG00000011354	lsm14b	56	33.971	ENSAPOG00000010003	-	57	47.674	Acanthochromis_polyacanthus
ENSTRUG00000011354	lsm14b	99	45.853	ENSAMEG00000013430	LSM14B	99	46.544	Ailuropoda_melanoleuca
ENSTRUG00000011354	lsm14b	99	69.613	ENSACIG00000012266	lsm14b	99	70.718	Amphilophus_citrinellus
ENSTRUG00000011354	lsm14b	61	38.683	ENSACIG00000003147	LSM14B	92	40.081	Amphilophus_citrinellus
ENSTRUG00000011354	lsm14b	96	46.073	ENSAOCG00000006667	LSM14B	96	46.649	Amphiprion_ocellaris
ENSTRUG00000011354	lsm14b	100	79.133	ENSAOCG00000012380	lsm14b	100	79.133	Amphiprion_ocellaris
ENSTRUG00000011354	lsm14b	100	69.022	ENSAPEG00000023633	lsm14b	100	71.662	Amphiprion_percula
ENSTRUG00000011354	lsm14b	64	41.071	ENSATEG00000015895	LSM14B	87	41.281	Anabas_testudineus
ENSTRUG00000011354	lsm14b	100	68.984	ENSATEG00000016603	lsm14b	100	72.193	Anabas_testudineus
ENSTRUG00000011354	lsm14b	82	44.504	ENSAPLG00000013203	LSM14B	99	45.185	Anas_platyrhynchos
ENSTRUG00000011354	lsm14b	99	51.145	ENSACAG00000016195	LSM14B	99	52.551	Anolis_carolinensis
ENSTRUG00000011354	lsm14b	100	45.103	ENSANAG00000037915	LSM14B	100	50.250	Aotus_nancymaae
ENSTRUG00000011354	lsm14b	55	39.171	ENSACLG00000019624	-	75	39.631	Astatotilapia_calliptera
ENSTRUG00000011354	lsm14b	55	37.788	ENSACLG00000011955	-	74	38.249	Astatotilapia_calliptera
ENSTRUG00000011354	lsm14b	100	74.194	ENSACLG00000019663	lsm14b	100	74.194	Astatotilapia_calliptera
ENSTRUG00000011354	lsm14b	90	51.467	ENSAMXG00000002865	lsm14b	99	54.115	Astyanax_mexicanus
ENSTRUG00000011354	lsm14b	100	45.909	ENSBTAG00000021558	LSM14B	100	46.591	Bos_taurus
ENSTRUG00000011354	lsm14b	100	45.786	ENSCJAG00000014434	LSM14B	100	51.000	Callithrix_jacchus
ENSTRUG00000011354	lsm14b	89	43.860	ENSCAFG00000012518	LSM14B	98	44.612	Canis_familiaris
ENSTRUG00000011354	lsm14b	100	51.500	ENSCAFG00020022150	LSM14B	100	52.250	Canis_lupus_dingo
ENSTRUG00000011354	lsm14b	99	38.107	ENSCHIG00000022681	-	100	38.107	Capra_hircus
ENSTRUG00000011354	lsm14b	100	46.727	ENSCHIG00000010284	-	100	51.238	Capra_hircus
ENSTRUG00000011354	lsm14b	88	47.486	ENSTSYG00000031914	LSM14B	89	48.324	Carlito_syrichta
ENSTRUG00000011354	lsm14b	81	48.624	ENSCAPG00000013059	LSM14B	100	47.632	Cavia_aperea
ENSTRUG00000011354	lsm14b	80	48.773	ENSCPOG00000038080	LSM14B	100	47.765	Cavia_porcellus
ENSTRUG00000011354	lsm14b	92	51.206	ENSCCAG00000021267	LSM14B	100	51.358	Cebus_capucinus
ENSTRUG00000011354	lsm14b	92	34.160	ENSCCAG00000024900	-	84	36.430	Cebus_capucinus
ENSTRUG00000011354	lsm14b	100	46.818	ENSCATG00000036006	LSM14B	100	52.120	Cercocebus_atys
ENSTRUG00000011354	lsm14b	80	49.693	ENSCLAG00000003186	LSM14B	100	49.441	Chinchilla_lanigera
ENSTRUG00000011354	lsm14b	100	47.191	ENSCSAG00000015729	LSM14B	100	47.178	Chlorocebus_sabaeus
ENSTRUG00000011354	lsm14b	67	35.018	ENSCHOG00000006997	-	100	36.525	Choloepus_hoffmanni
ENSTRUG00000011354	lsm14b	91	48.995	ENSCPBG00000027065	LSM14B	99	48.605	Chrysemys_picta_bellii
ENSTRUG00000011354	lsm14b	80	48.632	ENSCANG00000036986	LSM14B	100	49.030	Colobus_angolensis_palliatus
ENSTRUG00000011354	lsm14b	100	51.269	ENSCGRG00001018399	Lsm14b	100	52.041	Cricetulus_griseus_chok1gshd
ENSTRUG00000011354	lsm14b	61	38.866	ENSCGRG00000002484	-	99	38.400	Cricetulus_griseus_crigri
ENSTRUG00000011354	lsm14b	60	36.897	ENSCGRG00000006111	-	99	36.513	Cricetulus_griseus_crigri
ENSTRUG00000011354	lsm14b	94	46.543	ENSCSEG00000020669	LSM14B	95	48.767	Cynoglossus_semilaevis
ENSTRUG00000011354	lsm14b	100	69.415	ENSCSEG00000004722	lsm14b	100	69.415	Cynoglossus_semilaevis
ENSTRUG00000011354	lsm14b	64	37.652	ENSCVAG00000012433	-	95	37.652	Cyprinodon_variegatus
ENSTRUG00000011354	lsm14b	91	55.056	ENSDARG00000025386	lsm14b	99	54.242	Danio_rerio
ENSTRUG00000011354	lsm14b	68	38.125	ENSDNOG00000025246	LSM14B	100	38.125	Dasypus_novemcinctus
ENSTRUG00000011354	lsm14b	89	48.626	ENSDORG00000016683	Lsm14b	100	37.461	Dipodomys_ordii
ENSTRUG00000011354	lsm14b	57	36.052	ENSETEG00000011188	-	94	37.339	Echinops_telfairi
ENSTRUG00000011354	lsm14b	92	42.175	ENSETEG00000001869	-	97	41.772	Echinops_telfairi
ENSTRUG00000011354	lsm14b	68	37.346	ENSEASG00005023218	LSM14B	100	41.993	Equus_asinus_asinus
ENSTRUG00000011354	lsm14b	100	46.517	ENSECAG00000010659	LSM14B	100	51.724	Equus_caballus
ENSTRUG00000011354	lsm14b	98	57.979	ENSELUG00000005780	lsm14b	99	56.658	Esox_lucius
ENSTRUG00000011354	lsm14b	90	50.000	ENSELUG00000016299	LSM14B	99	49.869	Esox_lucius
ENSTRUG00000011354	lsm14b	92	52.432	ENSFCAG00000003248	LSM14B	100	52.736	Felis_catus
ENSTRUG00000011354	lsm14b	81	45.504	ENSFALG00000010618	LSM14B	100	44.254	Ficedula_albicollis
ENSTRUG00000011354	lsm14b	80	48.457	ENSFDAG00000002214	LSM14B	100	48.876	Fukomys_damarensis
ENSTRUG00000011354	lsm14b	71	49.270	ENSFHEG00000003362	LSM14B	75	46.333	Fundulus_heteroclitus
ENSTRUG00000011354	lsm14b	100	68.194	ENSFHEG00000006237	lsm14b	100	68.194	Fundulus_heteroclitus
ENSTRUG00000011354	lsm14b	100	60.108	ENSGMOG00000017115	lsm14b	99	61.995	Gadus_morhua
ENSTRUG00000011354	lsm14b	91	52.603	ENSGALG00000005125	LSM14B	99	51.605	Gallus_gallus
ENSTRUG00000011354	lsm14b	100	64.075	ENSGAFG00000020318	lsm14b	100	64.075	Gambusia_affinis
ENSTRUG00000011354	lsm14b	68	39.464	ENSGAFG00000013723	LSM14B	100	39.464	Gambusia_affinis
ENSTRUG00000011354	lsm14b	99	70.933	ENSGACG00000009973	lsm14b	99	70.933	Gasterosteus_aculeatus
ENSTRUG00000011354	lsm14b	55	40.991	ENSGAGG00000004106	LSM14B	94	41.339	Gopherus_agassizii
ENSTRUG00000011354	lsm14b	90	47.268	ENSGGOG00000005630	LSM14B	95	48.087	Gorilla_gorilla
ENSTRUG00000011354	lsm14b	92	52.316	ENSHGLG00000015055	LSM14B	100	52.381	Heterocephalus_glaber_female
ENSTRUG00000011354	lsm14b	80	48.447	ENSHGLG00100015273	LSM14B	100	48.870	Heterocephalus_glaber_male
ENSTRUG00000011354	lsm14b	94	45.946	ENSHCOG00000018747	LSM14B	95	47.283	Hippocampus_comes
ENSTRUG00000011354	lsm14b	68	53.937	ENSHCOG00000004867	lsm14b	100	53.937	Hippocampus_comes
ENSTRUG00000011354	lsm14b	90	54.622	ENSIPUG00000014946	lsm14b	94	55.990	Ictalurus_punctatus
ENSTRUG00000011354	lsm14b	80	49.387	ENSSTOG00000020482	LSM14B	100	49.162	Ictidomys_tridecemlineatus
ENSTRUG00000011354	lsm14b	99	52.120	ENSJJAG00000012728	Lsm14b	99	52.618	Jaculus_jaculus
ENSTRUG00000011354	lsm14b	100	70.430	ENSKMAG00000017524	lsm14b	100	72.043	Kryptolebias_marmoratus
ENSTRUG00000011354	lsm14b	51	41.089	ENSKMAG00000012834	-	96	42.009	Kryptolebias_marmoratus
ENSTRUG00000011354	lsm14b	68	37.308	ENSLBEG00000007951	LSM14B	100	37.692	Labrus_bergylta
ENSTRUG00000011354	lsm14b	91	49.005	ENSLACG00000003849	LSM14B	100	49.541	Latimeria_chalumnae
ENSTRUG00000011354	lsm14b	90	57.143	ENSLOCG00000003746	lsm14b	99	57.106	Lepisosteus_oculatus
ENSTRUG00000011354	lsm14b	89	48.352	ENSLAFG00000007492	LSM14B	100	48.352	Loxodonta_africana
ENSTRUG00000011354	lsm14b	100	46.501	ENSMFAG00000041479	LSM14B	100	51.733	Macaca_fascicularis
ENSTRUG00000011354	lsm14b	92	51.613	ENSMMUG00000014084	LSM14B	100	51.733	Macaca_mulatta
ENSTRUG00000011354	lsm14b	92	51.613	ENSMNEG00000045573	LSM14B	100	51.733	Macaca_nemestrina
ENSTRUG00000011354	lsm14b	80	48.773	ENSMLEG00000040895	LSM14B	100	49.162	Mandrillus_leucophaeus
ENSTRUG00000011354	lsm14b	95	50.000	ENSMAMG00000024124	LSM14B	95	50.139	Mastacembelus_armatus
ENSTRUG00000011354	lsm14b	100	74.133	ENSMAMG00000020539	lsm14b	100	74.133	Mastacembelus_armatus
ENSTRUG00000011354	lsm14b	91	48.739	ENSMZEG00005026001	LSM14B	98	48.787	Maylandia_zebra
ENSTRUG00000011354	lsm14b	100	74.124	ENSMZEG00005000987	lsm14b	100	74.124	Maylandia_zebra
ENSTRUG00000011354	lsm14b	82	48.024	ENSMGAG00000005300	LSM14B	99	48.753	Meleagris_gallopavo
ENSTRUG00000011354	lsm14b	100	50.761	ENSMAUG00000020700	Lsm14b	100	51.531	Mesocricetus_auratus
ENSTRUG00000011354	lsm14b	92	52.589	ENSMICG00000014675	LSM14B	100	52.632	Microcebus_murinus
ENSTRUG00000011354	lsm14b	61	34.892	ENSMOCG00000005119	-	93	35.870	Microtus_ochrogaster
ENSTRUG00000011354	lsm14b	100	49.877	ENSMOCG00000020600	Lsm14b	100	50.864	Microtus_ochrogaster
ENSTRUG00000011354	lsm14b	89	71.309	ENSMMOG00000020042	lsm14b	97	71.467	Mola_mola
ENSTRUG00000011354	lsm14b	90	48.844	ENSMMOG00000017321	LSM14B	93	47.619	Mola_mola
ENSTRUG00000011354	lsm14b	60	38.591	ENSMODG00000016690	LSM14B	100	39.091	Monodelphis_domestica
ENSTRUG00000011354	lsm14b	100	72.087	ENSMALG00000004783	lsm14b	97	72.849	Monopterus_albus
ENSTRUG00000011354	lsm14b	91	47.191	ENSMALG00000022251	LSM14B	98	46.809	Monopterus_albus
ENSTRUG00000011354	lsm14b	100	51.263	MGP_CAROLIEiJ_G0024770	Lsm14b	100	52.030	Mus_caroli
ENSTRUG00000011354	lsm14b	100	51.263	ENSMUSG00000039108	Lsm14b	100	52.030	Mus_musculus
ENSTRUG00000011354	lsm14b	100	51.515	MGP_PahariEiJ_G0026214	Lsm14b	100	52.284	Mus_pahari
ENSTRUG00000011354	lsm14b	100	51.263	MGP_SPRETEiJ_G0025693	Lsm14b	100	52.030	Mus_spretus
ENSTRUG00000011354	lsm14b	86	43.307	ENSMPUG00000007584	LSM14B	100	44.039	Mustela_putorius_furo
ENSTRUG00000011354	lsm14b	91	52.066	ENSMLUG00000000304	LSM14B	100	52.868	Myotis_lucifugus
ENSTRUG00000011354	lsm14b	88	47.922	ENSNLEG00000015757	LSM14B	100	48.753	Nomascus_leucogenys
ENSTRUG00000011354	lsm14b	66	74.306	ENSMEUG00000008267	-	79	74.306	Notamacropus_eugenii
ENSTRUG00000011354	lsm14b	92	52.316	ENSODEG00000004099	LSM14B	100	51.621	Octodon_degus
ENSTRUG00000011354	lsm14b	100	74.595	ENSONIG00000020318	lsm14b	100	74.865	Oreochromis_niloticus
ENSTRUG00000011354	lsm14b	73	54.945	ENSOANG00000003370	LSM14B	93	55.147	Ornithorhynchus_anatinus
ENSTRUG00000011354	lsm14b	81	49.226	ENSOCUG00000006279	LSM14B	100	48.732	Oryctolagus_cuniculus
ENSTRUG00000011354	lsm14b	100	71.196	ENSORLG00000013525	lsm14b	100	70.652	Oryzias_latipes
ENSTRUG00000011354	lsm14b	92	45.198	ENSORLG00000028353	LSM14B	96	44.444	Oryzias_latipes
ENSTRUG00000011354	lsm14b	100	71.196	ENSORLG00020020553	lsm14b	100	70.652	Oryzias_latipes_hni
ENSTRUG00000011354	lsm14b	61	33.730	ENSORLG00020018191	-	94	34.572	Oryzias_latipes_hni
ENSTRUG00000011354	lsm14b	100	71.196	ENSORLG00015016862	lsm14b	100	70.652	Oryzias_latipes_hsok
ENSTRUG00000011354	lsm14b	92	45.198	ENSORLG00015013157	LSM14B	96	44.444	Oryzias_latipes_hsok
ENSTRUG00000011354	lsm14b	100	71.935	ENSOMEG00000023917	lsm14b	100	71.390	Oryzias_melastigma
ENSTRUG00000011354	lsm14b	63	33.755	ENSOMEG00000000171	-	94	34.538	Oryzias_melastigma
ENSTRUG00000011354	lsm14b	100	46.953	ENSOGAG00000003915	LSM14B	100	47.630	Otolemur_garnettii
ENSTRUG00000011354	lsm14b	89	43.641	ENSOARG00000014706	LSM14B	98	44.389	Ovis_aries
ENSTRUG00000011354	lsm14b	90	47.268	ENSPPAG00000035799	LSM14B	95	48.087	Pan_paniscus
ENSTRUG00000011354	lsm14b	92	52.432	ENSPPRG00000009197	LSM14B	100	52.736	Panthera_pardus
ENSTRUG00000011354	lsm14b	60	41.633	ENSPTIG00000021518	LSM14B	99	41.948	Panthera_tigris_altaica
ENSTRUG00000011354	lsm14b	92	51.344	ENSPTRG00000013696	LSM14B	100	51.485	Pan_troglodytes
ENSTRUG00000011354	lsm14b	92	51.762	ENSPANG00000011747	LSM14B	100	51.870	Papio_anubis
ENSTRUG00000011354	lsm14b	91	58.333	ENSPKIG00000003275	lsm14b	85	80.435	Paramormyrops_kingsleyae
ENSTRUG00000011354	lsm14b	81	50.926	ENSPSIG00000014762	LSM14B	100	50.281	Pelodiscus_sinensis
ENSTRUG00000011354	lsm14b	99	51.157	ENSPEMG00000017688	Lsm14b	99	51.938	Peromyscus_maniculatus_bairdii
ENSTRUG00000011354	lsm14b	92	53.168	ENSPCIG00000013405	LSM14B	100	52.405	Phascolarctos_cinereus
ENSTRUG00000011354	lsm14b	100	69.624	ENSPFOG00000005631	lsm14b	100	69.624	Poecilia_formosa
ENSTRUG00000011354	lsm14b	100	69.086	ENSPLAG00000002449	lsm14b	100	69.086	Poecilia_latipinna
ENSTRUG00000011354	lsm14b	89	46.784	ENSPLAG00000005793	LSM14B	99	47.884	Poecilia_latipinna
ENSTRUG00000011354	lsm14b	88	47.198	ENSPMEG00000022953	LSM14B	99	47.340	Poecilia_mexicana
ENSTRUG00000011354	lsm14b	100	69.355	ENSPMEG00000000745	lsm14b	100	69.355	Poecilia_mexicana
ENSTRUG00000011354	lsm14b	61	39.919	ENSPREG00000007828	LSM14B	100	39.493	Poecilia_reticulata
ENSTRUG00000011354	lsm14b	92	52.316	ENSPCOG00000013625	LSM14B	100	52.381	Propithecus_coquereli
ENSTRUG00000011354	lsm14b	79	41.121	ENSPVAG00000017918	LSM14B	100	42.105	Pteropus_vampyrus
ENSTRUG00000011354	lsm14b	90	58.621	ENSPNAG00000012777	lsm14b	99	57.632	Pygocentrus_nattereri
ENSTRUG00000011354	lsm14b	100	45.740	ENSRNOG00000054557	Lsm14b	100	47.575	Rattus_norvegicus
ENSTRUG00000011354	lsm14b	89	47.922	ENSRBIG00000033461	LSM14B	99	49.030	Rhinopithecus_bieti
ENSTRUG00000011354	lsm14b	90	48.913	ENSRROG00000042949	LSM14B	91	49.728	Rhinopithecus_roxellana
ENSTRUG00000011354	lsm14b	80	47.385	ENSSBOG00000032820	LSM14B	100	47.899	Saimiri_boliviensis_boliviensis
ENSTRUG00000011354	lsm14b	81	48.930	ENSSHAG00000015528	LSM14B	96	49.304	Sarcophilus_harrisii
ENSTRUG00000011354	lsm14b	90	56.322	ENSSFOG00015004627	lsm14b	99	55.013	Scleropages_formosus
ENSTRUG00000011354	lsm14b	100	74.468	ENSSMAG00000012725	lsm14b	100	74.468	Scophthalmus_maximus
ENSTRUG00000011354	lsm14b	96	47.215	ENSSMAG00000000135	LSM14B	96	48.831	Scophthalmus_maximus
ENSTRUG00000011354	lsm14b	100	77.807	ENSSDUG00000020977	lsm14b	100	77.540	Seriola_dumerili
ENSTRUG00000011354	lsm14b	91	46.301	ENSSDUG00000022770	LSM14B	97	47.532	Seriola_dumerili
ENSTRUG00000011354	lsm14b	61	41.224	ENSSLDG00000011354	-	98	40.580	Seriola_lalandi_dorsalis
ENSTRUG00000011354	lsm14b	52	38.462	ENSSARG00000007749	-	99	38.462	Sorex_araneus
ENSTRUG00000011354	lsm14b	99	48.046	ENSSPUG00000014360	LSM14B	99	49.195	Sphenodon_punctatus
ENSTRUG00000011354	lsm14b	64	36.923	ENSSPAG00000018854	-	95	36.923	Stegastes_partitus
ENSTRUG00000011354	lsm14b	100	76.216	ENSSPAG00000020915	lsm14b	100	76.216	Stegastes_partitus
ENSTRUG00000011354	lsm14b	100	49.118	ENSSSCG00000026052	LSM14B	100	37.342	Sus_scrofa
ENSTRUG00000011354	lsm14b	81	49.847	ENSTGUG00000007884	LSM14B	100	50.139	Taeniopygia_guttata
ENSTRUG00000011354	lsm14b	100	77.608	ENSTNIG00000002445	lsm14b	100	77.608	Tetraodon_nigroviridis
ENSTRUG00000011354	lsm14b	82	76.190	ENSTTRG00000011043	LSM14B	82	76.190	Tursiops_truncatus
ENSTRUG00000011354	lsm14b	97	46.015	ENSUAMG00000025298	LSM14B	99	46.787	Ursus_americanus
ENSTRUG00000011354	lsm14b	97	46.015	ENSUMAG00000000480	LSM14B	99	46.787	Ursus_maritimus
ENSTRUG00000011354	lsm14b	89	48.333	ENSVVUG00000015920	LSM14B	98	49.167	Vulpes_vulpes
ENSTRUG00000011354	lsm14b	85	50.729	ENSXETG00000001997	lsm14b	99	52.959	Xenopus_tropicalis
ENSTRUG00000011354	lsm14b	100	67.925	ENSXMAG00000010013	lsm14b	100	67.925	Xiphophorus_maculatus