EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000011541 (Gene tree)
Gene ID: 101079399
Gene Symbol: rasef
Alias: si:ch73-275j21.1
Full Name: RAS and EF-hand domain containing
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 13584 bases
Position: chr21:8085967-8099550
Accession: 101079399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000029157	MMR_HSR1	PF01926.23	1.3e-07	1	1
ENSTRUP00000029156	MMR_HSR1	PF01926.23	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000029273	-	4396	XM_011615568	ENSTRUP00000029157	703 (aa)	XP_011613870	H2TWU8
ENSTRUT00000029272	-	4564	-	ENSTRUP00000029156	759 (aa)	-	H2TWU7

Gene Model

Click here to download ENSTRUG00000011541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000011541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000011541	rasef	77	41.837	ENSTRUG00000023284	CRACR2A	77	41.837

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000011541	rasef	99	49.475	ENSG00000165105	RASEF	99	49.277	Homo_sapiens
ENSTRUG00000011541	rasef	93	78.505	ENSAPOG00000024369	rasef	99	78.505	Acanthochromis_polyacanthus
ENSTRUG00000011541	rasef	98	49.464	ENSAMEG00000009467	RASEF	98	49.598	Ailuropoda_melanoleuca
ENSTRUG00000011541	rasef	96	71.429	ENSACIG00000005549	rasef	97	76.777	Amphilophus_citrinellus
ENSTRUG00000011541	rasef	93	75.189	ENSAOCG00000011464	rasef	92	75.189	Amphiprion_ocellaris
ENSTRUG00000011541	rasef	99	78.059	ENSAPEG00000003461	rasef	99	78.481	Amphiprion_percula
ENSTRUG00000011541	rasef	95	78.909	ENSATEG00000015032	rasef	100	79.570	Anabas_testudineus
ENSTRUG00000011541	rasef	86	52.167	ENSAPLG00000013969	RASEF	95	52.327	Anas_platyrhynchos
ENSTRUG00000011541	rasef	96	51.617	ENSACAG00000002155	RASEF	96	51.617	Anolis_carolinensis
ENSTRUG00000011541	rasef	99	49.606	ENSANAG00000035226	RASEF	99	50.131	Aotus_nancymaae
ENSTRUG00000011541	rasef	99	80.367	ENSACLG00000017818	rasef	99	80.367	Astatotilapia_calliptera
ENSTRUG00000011541	rasef	98	55.617	ENSAMXG00000011411	rasef	97	56.172	Astyanax_mexicanus
ENSTRUG00000011541	rasef	99	50.132	ENSBTAG00000021751	RASEF	99	50.264	Bos_taurus
ENSTRUG00000011541	rasef	99	50.197	ENSCJAG00000003547	RASEF	99	50.460	Callithrix_jacchus
ENSTRUG00000011541	rasef	96	52.895	ENSCAFG00000001453	RASEF	91	48.895	Canis_familiaris
ENSTRUG00000011541	rasef	96	53.052	ENSCAFG00020023859	RASEF	99	49.407	Canis_lupus_dingo
ENSTRUG00000011541	rasef	99	50.396	ENSCHIG00000020336	RASEF	97	53.968	Capra_hircus
ENSTRUG00000011541	rasef	75	52.277	ENSTSYG00000006987	RASEF	99	52.277	Carlito_syrichta
ENSTRUG00000011541	rasef	72	45.224	ENSCAPG00000010585	-	99	48.677	Cavia_aperea
ENSTRUG00000011541	rasef	85	50.318	ENSCPOG00000005004	RASEF	99	50.318	Cavia_porcellus
ENSTRUG00000011541	rasef	99	49.539	ENSCCAG00000031624	RASEF	99	49.934	Cebus_capucinus
ENSTRUG00000011541	rasef	62	45.906	ENSCLAG00000004622	-	91	45.906	Chinchilla_lanigera
ENSTRUG00000011541	rasef	99	49.737	ENSCSAG00000007663	RASEF	99	49.737	Chlorocebus_sabaeus
ENSTRUG00000011541	rasef	83	52.483	ENSCHOG00000001831	RASEF	96	52.483	Choloepus_hoffmanni
ENSTRUG00000011541	rasef	99	51.374	ENSCPBG00000019037	RASEF	99	51.374	Chrysemys_picta_bellii
ENSTRUG00000011541	rasef	99	49.410	ENSCANG00000034081	RASEF	99	49.541	Colobus_angolensis_palliatus
ENSTRUG00000011541	rasef	85	53.008	ENSCGRG00001001324	Rasef	99	53.008	Cricetulus_griseus_chok1gshd
ENSTRUG00000011541	rasef	80	52.759	ENSCGRG00000006455	Rasef	99	52.759	Cricetulus_griseus_crigri
ENSTRUG00000011541	rasef	91	66.873	ENSCSEG00000017898	rasef	92	69.585	Cynoglossus_semilaevis
ENSTRUG00000011541	rasef	99	78.028	ENSCVAG00000006168	rasef	96	78.169	Cyprinodon_variegatus
ENSTRUG00000011541	rasef	99	57.456	ENSDARG00000076250	rasef	99	57.456	Danio_rerio
ENSTRUG00000011541	rasef	99	50.000	ENSDNOG00000006002	RASEF	90	50.000	Dasypus_novemcinctus
ENSTRUG00000011541	rasef	79	52.332	ENSDORG00000015570	Rasef	99	52.249	Dipodomys_ordii
ENSTRUG00000011541	rasef	95	41.044	ENSEBUG00000012629	rasef	97	41.094	Eptatretus_burgeri
ENSTRUG00000011541	rasef	84	35.247	ENSEBUG00000012179	rasef	99	35.247	Eptatretus_burgeri
ENSTRUG00000011541	rasef	99	52.329	ENSEASG00005015967	RASEF	99	52.329	Equus_asinus_asinus
ENSTRUG00000011541	rasef	99	52.233	ENSECAG00000000324	RASEF	98	53.514	Equus_caballus
ENSTRUG00000011541	rasef	71	61.468	ENSEEUG00000008455	RASEF	95	61.468	Erinaceus_europaeus
ENSTRUG00000011541	rasef	99	50.199	ENSFCAG00000002416	RASEF	99	50.331	Felis_catus
ENSTRUG00000011541	rasef	86	52.013	ENSFALG00000003611	RASEF	99	52.496	Ficedula_albicollis
ENSTRUG00000011541	rasef	85	53.074	ENSFDAG00000013428	RASEF	99	53.074	Fukomys_damarensis
ENSTRUG00000011541	rasef	89	82.243	ENSFHEG00000022470	rasef	95	82.243	Fundulus_heteroclitus
ENSTRUG00000011541	rasef	83	84.795	ENSGMOG00000010090	rasef	99	84.795	Gadus_morhua
ENSTRUG00000011541	rasef	99	48.916	ENSGALG00000012576	RASEF	99	49.864	Gallus_gallus
ENSTRUG00000011541	rasef	99	78.451	ENSGAFG00000013735	rasef	97	78.451	Gambusia_affinis
ENSTRUG00000011541	rasef	99	75.490	ENSGACG00000007528	rasef	99	75.490	Gasterosteus_aculeatus
ENSTRUG00000011541	rasef	99	51.389	ENSGAGG00000007338	RASEF	99	51.818	Gopherus_agassizii
ENSTRUG00000011541	rasef	99	49.344	ENSGGOG00000006651	RASEF	99	49.540	Gorilla_gorilla
ENSTRUG00000011541	rasef	99	80.367	ENSHBUG00000010345	rasef	98	80.367	Haplochromis_burtoni
ENSTRUG00000011541	rasef	99	49.731	ENSHGLG00000000399	RASEF	99	49.731	Heterocephalus_glaber_female
ENSTRUG00000011541	rasef	85	52.913	ENSHGLG00100008043	RASEF	99	52.913	Heterocephalus_glaber_male
ENSTRUG00000011541	rasef	100	62.413	ENSHCOG00000010976	rasef	100	69.683	Hippocampus_comes
ENSTRUG00000011541	rasef	99	53.635	ENSIPUG00000008768	rasef	97	53.635	Ictalurus_punctatus
ENSTRUG00000011541	rasef	99	48.433	ENSSTOG00000004311	RASEF	99	49.346	Ictidomys_tridecemlineatus
ENSTRUG00000011541	rasef	85	52.970	ENSJJAG00000023215	Rasef	99	52.960	Jaculus_jaculus
ENSTRUG00000011541	rasef	99	73.859	ENSKMAG00000021106	rasef	88	73.870	Kryptolebias_marmoratus
ENSTRUG00000011541	rasef	95	79.654	ENSLBEG00000021098	-	99	71.817	Labrus_bergylta
ENSTRUG00000011541	rasef	99	53.070	ENSLACG00000010849	RASEF	99	53.070	Latimeria_chalumnae
ENSTRUG00000011541	rasef	99	58.194	ENSLOCG00000002094	rasef	98	58.194	Lepisosteus_oculatus
ENSTRUG00000011541	rasef	86	53.784	ENSLAFG00000010552	RASEF	99	53.784	Loxodonta_africana
ENSTRUG00000011541	rasef	99	49.672	ENSMFAG00000046414	RASEF	99	49.803	Macaca_fascicularis
ENSTRUG00000011541	rasef	99	49.478	ENSMNEG00000044341	RASEF	99	49.347	Macaca_nemestrina
ENSTRUG00000011541	rasef	99	49.672	ENSMLEG00000034579	RASEF	99	49.672	Mandrillus_leucophaeus
ENSTRUG00000011541	rasef	86	78.571	ENSMAMG00000001536	rasef	96	79.058	Mastacembelus_armatus
ENSTRUG00000011541	rasef	96	69.733	ENSMZEG00005004819	rasef	97	77.725	Maylandia_zebra
ENSTRUG00000011541	rasef	85	53.440	ENSMAUG00000010820	Rasef	99	53.440	Mesocricetus_auratus
ENSTRUG00000011541	rasef	98	49.798	ENSMICG00000011836	RASEF	99	50.000	Microcebus_murinus
ENSTRUG00000011541	rasef	86	53.035	ENSMOCG00000000943	Rasef	99	53.184	Microtus_ochrogaster
ENSTRUG00000011541	rasef	85	85.238	ENSMMOG00000000102	rasef	95	85.238	Mola_mola
ENSTRUG00000011541	rasef	99	50.399	ENSMODG00000009037	RASEF	99	50.798	Monodelphis_domestica
ENSTRUG00000011541	rasef	99	72.817	ENSMALG00000009830	rasef	99	72.817	Monopterus_albus
ENSTRUG00000011541	rasef	88	51.777	MGP_CAROLIEiJ_G0026109	Rasef	99	53.265	Mus_caroli
ENSTRUG00000011541	rasef	99	51.719	ENSMUSG00000043003	Rasef	99	52.389	Mus_musculus
ENSTRUG00000011541	rasef	85	52.751	MGP_PahariEiJ_G0028447	Rasef	99	52.931	Mus_pahari
ENSTRUG00000011541	rasef	88	51.238	MGP_SPRETEiJ_G0027075	Rasef	99	52.668	Mus_spretus
ENSTRUG00000011541	rasef	80	51.291	ENSMPUG00000013070	RASEF	99	51.291	Mustela_putorius_furo
ENSTRUG00000011541	rasef	99	49.670	ENSMLUG00000013108	RASEF	99	49.934	Myotis_lucifugus
ENSTRUG00000011541	rasef	80	52.659	ENSNGAG00000014878	Rasef	99	52.659	Nannospalax_galili
ENSTRUG00000011541	rasef	95	72.148	ENSNBRG00000012335	rasef	99	72.148	Neolamprologus_brichardi
ENSTRUG00000011541	rasef	99	48.752	ENSNLEG00000003245	RASEF	99	49.409	Nomascus_leucogenys
ENSTRUG00000011541	rasef	99	48.748	ENSMEUG00000016412	RASEF	95	52.772	Notamacropus_eugenii
ENSTRUG00000011541	rasef	85	49.123	ENSOPRG00000002742	-	80	49.123	Ochotona_princeps
ENSTRUG00000011541	rasef	99	80.453	ENSONIG00000015021	rasef	95	80.453	Oreochromis_niloticus
ENSTRUG00000011541	rasef	99	48.362	ENSOANG00000010379	RASEF	99	48.362	Ornithorhynchus_anatinus
ENSTRUG00000011541	rasef	99	48.285	ENSOCUG00000001548	RASEF	99	48.285	Oryctolagus_cuniculus
ENSTRUG00000011541	rasef	99	75.352	ENSORLG00000005076	rasef	95	75.493	Oryzias_latipes
ENSTRUG00000011541	rasef	99	75.493	ENSORLG00020020049	rasef	95	75.634	Oryzias_latipes_hni
ENSTRUG00000011541	rasef	99	75.211	ENSORLG00015008479	rasef	95	75.352	Oryzias_latipes_hsok
ENSTRUG00000011541	rasef	99	76.620	ENSOMEG00000023457	rasef	99	78.024	Oryzias_melastigma
ENSTRUG00000011541	rasef	86	54.180	ENSOGAG00000012724	RASEF	99	54.180	Otolemur_garnettii
ENSTRUG00000011541	rasef	99	50.264	ENSOARG00000009073	RASEF	93	50.396	Ovis_aries
ENSTRUG00000011541	rasef	99	50.474	ENSPPAG00000042152	RASEF	99	51.015	Pan_paniscus
ENSTRUG00000011541	rasef	99	49.868	ENSPPRG00000008487	RASEF	99	50.000	Panthera_pardus
ENSTRUG00000011541	rasef	88	53.605	ENSPTIG00000006676	RASEF	96	52.110	Panthera_tigris_altaica
ENSTRUG00000011541	rasef	99	50.474	ENSPTRG00000021052	RASEF	99	51.015	Pan_troglodytes
ENSTRUG00000011541	rasef	99	49.541	ENSPANG00000024899	RASEF	99	49.541	Papio_anubis
ENSTRUG00000011541	rasef	91	50.225	ENSPSIG00000017699	RASEF	99	50.604	Pelodiscus_sinensis
ENSTRUG00000011541	rasef	88	81.463	ENSPMGG00000015499	rasef	86	91.176	Periophthalmus_magnuspinnatus
ENSTRUG00000011541	rasef	85	53.312	ENSPEMG00000002797	Rasef	99	53.312	Peromyscus_maniculatus_bairdii
ENSTRUG00000011541	rasef	89	43.676	ENSPMAG00000001634	rasef	98	39.373	Petromyzon_marinus
ENSTRUG00000011541	rasef	99	50.660	ENSPCIG00000027655	RASEF	99	50.660	Phascolarctos_cinereus
ENSTRUG00000011541	rasef	99	73.813	ENSPFOG00000018924	rasef	99	73.813	Poecilia_formosa
ENSTRUG00000011541	rasef	76	83.478	ENSPLAG00000022907	RASEF	96	83.478	Poecilia_latipinna
ENSTRUG00000011541	rasef	99	78.501	ENSPMEG00000006546	rasef	99	78.501	Poecilia_mexicana
ENSTRUG00000011541	rasef	99	78.028	ENSPREG00000018728	rasef	94	78.028	Poecilia_reticulata
ENSTRUG00000011541	rasef	99	49.146	ENSPPYG00000019320	RASEF	99	49.146	Pongo_abelii
ENSTRUG00000011541	rasef	99	50.131	ENSPCOG00000022979	RASEF	99	50.131	Propithecus_coquereli
ENSTRUG00000011541	rasef	99	49.347	ENSPVAG00000003682	RASEF	99	49.672	Pteropus_vampyrus
ENSTRUG00000011541	rasef	96	76.393	ENSPNYG00000010579	rasef	95	76.393	Pundamilia_nyererei
ENSTRUG00000011541	rasef	99	54.945	ENSPNAG00000016447	rasef	99	54.945	Pygocentrus_nattereri
ENSTRUG00000011541	rasef	99	50.275	ENSRNOG00000024190	Rasef	99	50.275	Rattus_norvegicus
ENSTRUG00000011541	rasef	99	49.410	ENSRBIG00000039516	RASEF	99	49.541	Rhinopithecus_bieti
ENSTRUG00000011541	rasef	95	50.411	ENSRROG00000044397	RASEF	99	50.548	Rhinopithecus_roxellana
ENSTRUG00000011541	rasef	99	49.017	ENSSBOG00000029298	RASEF	99	49.017	Saimiri_boliviensis_boliviensis
ENSTRUG00000011541	rasef	99	56.131	ENSSFOG00015009014	rasef	99	56.131	Scleropages_formosus
ENSTRUG00000011541	rasef	100	77.947	ENSSMAG00000000942	rasef	100	77.947	Scophthalmus_maximus
ENSTRUG00000011541	rasef	86	75.217	ENSSDUG00000022228	rasef	92	75.217	Seriola_dumerili
ENSTRUG00000011541	rasef	99	78.592	ENSSLDG00000001784	rasef	93	78.592	Seriola_lalandi_dorsalis
ENSTRUG00000011541	rasef	99	49.444	ENSSPUG00000002899	RASEF	99	51.575	Sphenodon_punctatus
ENSTRUG00000011541	rasef	99	76.902	ENSSPAG00000002442	rasef	95	78.037	Stegastes_partitus
ENSTRUG00000011541	rasef	88	54.147	ENSSSCG00000040707	-	93	54.147	Sus_scrofa
ENSTRUG00000011541	rasef	99	49.865	ENSTGUG00000003216	RASEF	99	50.270	Taeniopygia_guttata
ENSTRUG00000011541	rasef	99	80.769	ENSTNIG00000006010	rasef	99	80.769	Tetraodon_nigroviridis
ENSTRUG00000011541	rasef	99	45.395	ENSTTRG00000002061	RASEF	99	45.395	Tursiops_truncatus
ENSTRUG00000011541	rasef	99	50.813	ENSUAMG00000021591	RASEF	99	51.020	Ursus_americanus
ENSTRUG00000011541	rasef	86	52.800	ENSUMAG00000004670	RASEF	94	52.800	Ursus_maritimus
ENSTRUG00000011541	rasef	88	52.582	ENSVVUG00000029736	RASEF	98	52.582	Vulpes_vulpes
ENSTRUG00000011541	rasef	99	48.383	ENSXETG00000016758	mgc147600	99	48.383	Xenopus_tropicalis
ENSTRUG00000011541	rasef	70	83.117	ENSXCOG00000005178	rasef	82	83.117	Xiphophorus_couchianus
ENSTRUG00000011541	rasef	99	78.592	ENSXMAG00000015129	rasef	99	78.592	Xiphophorus_maculatus